Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cco07g0369 | ATGGATTTCGTGTATGTTGTGTACATGGGAAAACCATTTGAAGGAAATTTCTTAGCTATGTCTGAACAGCACACCAACATGCTTCAACAAGTTCTTACGACAAGTGAAGCATCAGAATCTTTGGTGTATAGCTACCATCGGAGCTTCAATGGCTTTGCAGCGAGGCTCAACGAGGAGGAGGCTCGAATACTCGCCGCAATGGATGAAGTTGTGTCTGTGTTTCCGAGTGAAAAGAAACAACTTCATACCACAAGATCATGGGATTTCATGGGTCTATTCCAACAAACTCGAAGAGCCAACTTAGAGTCCAATTTGATTATCGGAATGTTGGATACTGGGATTTGGCCGGAATCTCAAAGCTTTTCCGATGAAGGCTTTGACCCACCGCCGCTTAAATGGAAAGGAGAATGCCAACCCTTTTCTAATTTCACCTGCAACAATAAAATAATCGGAGCTCGATTCTTCCGGAGCGAGCCTCTCGCCGGAGCCGATATTCTTTCTCCAAGAGATACAGAAGGCCATGGAACCCACACTTCATCCACCGCCGCCGGTAATTTTGTATCCGGCGCCAGCCTCTCGGGCCTCGCCGTCGGCACCGCTCGGGGAGGCGTTCCCTCCGCTCGCATCGCCGTCTACAAGATCTGCTGGTCCGATGGTTGCTTCGATGCCGACATCCTCGCAGCTTTCGACAGTGCAATCGCTGATGGCGTCGACATCATCTCCATTTCCGTCGGAGGTTTTATCGCCAAGAATTACTTCAACGATTCAATCGCTATTGGGGCTTTTCACGCAATGAAGAACGGTATTCTGACTTCAAATTCCGGAGGCAATTCTGGCCCTAGCCTTGGTAGTATCACGAATGTTTCTCCATGGTCGTTATCGGTGGCTGCTAGCACCATCGATAGGAAGTTTGTGACTAATGTGAAGTTGGGTAATGGAGAATCCACTCAGGGGATCTCTGTGAACACCTTCCAACTTGGAGATGAGTTTTTTCCGCTTATATATGCTGGTGATGCTCCTAATAGAACTGCAGGTTTCAATGAATCATTATCAAGGTTCTGCCTCCCAGGTTCTTTGGACGTGGACAAAGTTCAGGGGAAGATTGTTTTATGCGATGAGGTTGGTGATGGAGAACCAGCTTTGAGTGGTGGTGCGGTTGGTACAATAATGCAAGATGCTGGCCATCAAGATGTTGCCTTTCTTTTCCCCCTACCTGTTTCCTTGATAGACTTGGACGCTGGAAAGAACGTTTTCCAGTACCTGAGATCAACCAGCAATCCGGTGGCTACCATAGAAAAGAGTACTACCATTGAGGATCTGTCAGCTCCTTCTGTAGTTTCCTTCTCATCAAGGGGTCCTAATATAGTTACACCGGACATTCTCAAGCCTGATTTGGCCGCACCAGGAGTGGATATACTAGCATCTTGGTCTGAAGGCACAACAATCACAGGTTTAGAAGGGGATAACCGAATAGCTCCATTTAACATAATCTCTGGCACATCCATGGCTTGCCCACATGCAACAGGAGCAGCTGCCTATGTCAAATCCTTCCATCCAACTTGGTCTCCAGCTGCTATCAAGTCAGCACTTATGACAACTGCTTTTCCCATGACTCCAAAGTTAAACACAGATGCTGAGTTTGCATATGGAGCAGGTCACTTAAATCCAGTAAATGCCATTAACCCCGGTTTAGTCTATGATGCTGAAGAGCTTGACTACATAAAGTTCTTATGTGGGCAAGGATATAGTACTGCTAATCTTCGTCTTGTTACTGGTGACCAGAGCAACTGTTCAGGTGTTACAAAGACAGCTGCATCGGATCTAAACTATCCATCTTTTGCTCTAGTGATCAATTCTCCAAGTCAAAGATTGATTCATCGTGTATACCACAGGACTGTCACAAATGTTGGGCTGCCAGTGTCGACTTATAAAGCAGTTATTCAAACTCCGCCCGGGCTCAAAGTTACAGTACGTCCTGCTACTCTTTCTTTCCGTTCTCTTGGACAAAAGATATCCTTCACTGTGATTGTGAGAGCTAAAGCAGAAGTTGGTGGAAAGATGCTTTCTGGCAGCTTAACCTGGGATGATGGAGTGCATCTGTTATCATTCTTGCCTTTGAATCTTATCCCTGAATCTGAATCTGAATGCCTTCATGTTCATCCGATCACCACAGCCACCAAAAAATGCTCTCCGAATTTAGCACAACTTTCCCCAATCACAAAACTTACAGATACTCAGAAGTCAAAACAATAA | 2253 | 45.89 | MDFVYVVYMGKPFEGNFLAMSEQHTNMLQQVLTTSEASESLVYSYHRSFNGFAARLNEEEARILAAMDEVVSVFPSEKKQLHTTRSWDFMGLFQQTRRANLESNLIIGMLDTGIWPESQSFSDEGFDPPPLKWKGECQPFSNFTCNNKIIGARFFRSEPLAGADILSPRDTEGHGTHTSSTAAGNFVSGASLSGLAVGTARGGVPSARIAVYKICWSDGCFDADILAAFDSAIADGVDIISISVGGFIAKNYFNDSIAIGAFHAMKNGILTSNSGGNSGPSLGSITNVSPWSLSVAASTIDRKFVTNVKLGNGESTQGISVNTFQLGDEFFPLIYAGDAPNRTAGFNESLSRFCLPGSLDVDKVQGKIVLCDEVGDGEPALSGGAVGTIMQDAGHQDVAFLFPLPVSLIDLDAGKNVFQYLRSTSNPVATIEKSTTIEDLSAPSVVSFSSRGPNIVTPDILKPDLAAPGVDILASWSEGTTITGLEGDNRIAPFNIISGTSMACPHATGAAAYVKSFHPTWSPAAIKSALMTTAFPMTPKLNTDAEFAYGAGHLNPVNAINPGLVYDAEELDYIKFLCGQGYSTANLRLVTGDQSNCSGVTKTAASDLNYPSFALVINSPSQRLIHRVYHRTVTNVGLPVSTYKAVIQTPPGLKVTVRPATLSFRSLGQKISFTVIVRAKAEVGGKMLSGSLTWDDGVHLLSFLPLNLIPESESECLHVHPITTATKKCSPNLAQLSPITKLTDTQKSKQ | 750 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 4020777 | 4029122 | + | CcPI632755_07g003690.1 | Cco07g0369 | 183022 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cco07g0369 | 750 | Gene3D | Peptidase S8/S53 domain | 105 | 573 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
| Cco07g0369 | 750 | FunFam | Subtilisin-like protease SBT5.3 | 1 | 82 | - | - | |
| Cco07g0369 | 750 | PRINTS | Subtilisin serine protease family (S8) signature | 498 | 514 | IPR015500 | - | |
| Cco07g0369 | 750 | PRINTS | Subtilisin serine protease family (S8) signature | 102 | 121 | IPR015500 | - | |
| Cco07g0369 | 750 | PRINTS | Subtilisin serine protease family (S8) signature | 170 | 183 | IPR015500 | - | |
| Cco07g0369 | 750 | Gene3D | - | 577 | 704 | - | - | |
| Cco07g0369 | 750 | Pfam | Peptidase inhibitor I9 | 4 | 82 | IPR010259 | - | |
| Cco07g0369 | 750 | FunFam | Subtilisin-like protease SBT1.5 | 104 | 323 | - | - | |
| Cco07g0369 | 750 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 2 | 82 | IPR037045 | - | |
| Cco07g0369 | 750 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 5 | 696 | IPR045051 | - | |
| Cco07g0369 | 750 | CDD | PA_subtilisin_like | 307 | 431 | - | - | |
| Cco07g0369 | 750 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 86 | 560 | - | - | |
| Cco07g0369 | 750 | Pfam | Subtilase family | 103 | 552 | IPR000209 | GO:0006508(InterPro)|GO:0008236(InterPro) | |
| Cco07g0369 | 750 | CDD | Peptidases_S8_3 | 79 | 534 | IPR034197 | - | |
| Cco07g0369 | 750 | Gene3D | - | 301 | 438 | - | - | |
| Cco07g0369 | 750 | SUPERFAMILY | Subtilisin-like | 81 | 564 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
| Cco07g0369 | 750 | Pfam | Fibronectin type-III domain | 607 | 700 | IPR041469 | - | |
| Cco07g0369 | 750 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 499 | 509 | IPR023828 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cco07g0360 | Cco-Chr7:3886612 | Cco07g0369 | Cco-Chr7:4020777 | 7.20E-08 | dispersed | |
| Cco07g0367 | Cco-Chr7:3974708 | Cco07g0369 | Cco-Chr7:4020777 | 9.90E-139 | dispersed | |
| Cco07g0369 | Cco-Chr7:4020777 | Cco07g0711 | Cco-Chr7:13051037 | 3.60E-192 | dispersed | |
| Cco07g0368 | Cco-Chr7:4006329 | Cco07g0369 | Cco-Chr7:4020777 | 2.80E-229 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cco07g0369 | - | - | - | 0.0 |