Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cco07g0369 ATGGATTTCGTGTATGTTGTGTACATGGGAAAACCATTTGAAGGAAATTTCTTAGCTATGTCTGAACAGCACACCAACATGCTTCAACAAGTTCTTACGACAAGTGAAGCATCAGAATCTTTGGTGTATAGCTACCATCGGAGCTTCAATGGCTTTGCAGCGAGGCTCAACGAGGAGGAGGCTCGAATACTCGCCGCAATGGATGAAGTTGTGTCTGTGTTTCCGAGTGAAAAGAAACAACTTCATACCACAAGATCATGGGATTTCATGGGTCTATTCCAACAAACTCGAAGAGCCAACTTAGAGTCCAATTTGATTATCGGAATGTTGGATACTGGGATTTGGCCGGAATCTCAAAGCTTTTCCGATGAAGGCTTTGACCCACCGCCGCTTAAATGGAAAGGAGAATGCCAACCCTTTTCTAATTTCACCTGCAACAATAAAATAATCGGAGCTCGATTCTTCCGGAGCGAGCCTCTCGCCGGAGCCGATATTCTTTCTCCAAGAGATACAGAAGGCCATGGAACCCACACTTCATCCACCGCCGCCGGTAATTTTGTATCCGGCGCCAGCCTCTCGGGCCTCGCCGTCGGCACCGCTCGGGGAGGCGTTCCCTCCGCTCGCATCGCCGTCTACAAGATCTGCTGGTCCGATGGTTGCTTCGATGCCGACATCCTCGCAGCTTTCGACAGTGCAATCGCTGATGGCGTCGACATCATCTCCATTTCCGTCGGAGGTTTTATCGCCAAGAATTACTTCAACGATTCAATCGCTATTGGGGCTTTTCACGCAATGAAGAACGGTATTCTGACTTCAAATTCCGGAGGCAATTCTGGCCCTAGCCTTGGTAGTATCACGAATGTTTCTCCATGGTCGTTATCGGTGGCTGCTAGCACCATCGATAGGAAGTTTGTGACTAATGTGAAGTTGGGTAATGGAGAATCCACTCAGGGGATCTCTGTGAACACCTTCCAACTTGGAGATGAGTTTTTTCCGCTTATATATGCTGGTGATGCTCCTAATAGAACTGCAGGTTTCAATGAATCATTATCAAGGTTCTGCCTCCCAGGTTCTTTGGACGTGGACAAAGTTCAGGGGAAGATTGTTTTATGCGATGAGGTTGGTGATGGAGAACCAGCTTTGAGTGGTGGTGCGGTTGGTACAATAATGCAAGATGCTGGCCATCAAGATGTTGCCTTTCTTTTCCCCCTACCTGTTTCCTTGATAGACTTGGACGCTGGAAAGAACGTTTTCCAGTACCTGAGATCAACCAGCAATCCGGTGGCTACCATAGAAAAGAGTACTACCATTGAGGATCTGTCAGCTCCTTCTGTAGTTTCCTTCTCATCAAGGGGTCCTAATATAGTTACACCGGACATTCTCAAGCCTGATTTGGCCGCACCAGGAGTGGATATACTAGCATCTTGGTCTGAAGGCACAACAATCACAGGTTTAGAAGGGGATAACCGAATAGCTCCATTTAACATAATCTCTGGCACATCCATGGCTTGCCCACATGCAACAGGAGCAGCTGCCTATGTCAAATCCTTCCATCCAACTTGGTCTCCAGCTGCTATCAAGTCAGCACTTATGACAACTGCTTTTCCCATGACTCCAAAGTTAAACACAGATGCTGAGTTTGCATATGGAGCAGGTCACTTAAATCCAGTAAATGCCATTAACCCCGGTTTAGTCTATGATGCTGAAGAGCTTGACTACATAAAGTTCTTATGTGGGCAAGGATATAGTACTGCTAATCTTCGTCTTGTTACTGGTGACCAGAGCAACTGTTCAGGTGTTACAAAGACAGCTGCATCGGATCTAAACTATCCATCTTTTGCTCTAGTGATCAATTCTCCAAGTCAAAGATTGATTCATCGTGTATACCACAGGACTGTCACAAATGTTGGGCTGCCAGTGTCGACTTATAAAGCAGTTATTCAAACTCCGCCCGGGCTCAAAGTTACAGTACGTCCTGCTACTCTTTCTTTCCGTTCTCTTGGACAAAAGATATCCTTCACTGTGATTGTGAGAGCTAAAGCAGAAGTTGGTGGAAAGATGCTTTCTGGCAGCTTAACCTGGGATGATGGAGTGCATCTGTTATCATTCTTGCCTTTGAATCTTATCCCTGAATCTGAATCTGAATGCCTTCATGTTCATCCGATCACCACAGCCACCAAAAAATGCTCTCCGAATTTAGCACAACTTTCCCCAATCACAAAACTTACAGATACTCAGAAGTCAAAACAATAA 2253 45.89 MDFVYVVYMGKPFEGNFLAMSEQHTNMLQQVLTTSEASESLVYSYHRSFNGFAARLNEEEARILAAMDEVVSVFPSEKKQLHTTRSWDFMGLFQQTRRANLESNLIIGMLDTGIWPESQSFSDEGFDPPPLKWKGECQPFSNFTCNNKIIGARFFRSEPLAGADILSPRDTEGHGTHTSSTAAGNFVSGASLSGLAVGTARGGVPSARIAVYKICWSDGCFDADILAAFDSAIADGVDIISISVGGFIAKNYFNDSIAIGAFHAMKNGILTSNSGGNSGPSLGSITNVSPWSLSVAASTIDRKFVTNVKLGNGESTQGISVNTFQLGDEFFPLIYAGDAPNRTAGFNESLSRFCLPGSLDVDKVQGKIVLCDEVGDGEPALSGGAVGTIMQDAGHQDVAFLFPLPVSLIDLDAGKNVFQYLRSTSNPVATIEKSTTIEDLSAPSVVSFSSRGPNIVTPDILKPDLAAPGVDILASWSEGTTITGLEGDNRIAPFNIISGTSMACPHATGAAAYVKSFHPTWSPAAIKSALMTTAFPMTPKLNTDAEFAYGAGHLNPVNAINPGLVYDAEELDYIKFLCGQGYSTANLRLVTGDQSNCSGVTKTAASDLNYPSFALVINSPSQRLIHRVYHRTVTNVGLPVSTYKAVIQTPPGLKVTVRPATLSFRSLGQKISFTVIVRAKAEVGGKMLSGSLTWDDGVHLLSFLPLNLIPESESECLHVHPITTATKKCSPNLAQLSPITKLTDTQKSKQ 750
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 4020777 4029122 + CcPI632755_07g003690.1 Cco07g0369 183022
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cco07g0369 750 Gene3D Peptidase S8/S53 domain 105 573 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cco07g0369 750 FunFam Subtilisin-like protease SBT5.3 1 82 - -
Cco07g0369 750 PRINTS Subtilisin serine protease family (S8) signature 498 514 IPR015500 -
Cco07g0369 750 PRINTS Subtilisin serine protease family (S8) signature 102 121 IPR015500 -
Cco07g0369 750 PRINTS Subtilisin serine protease family (S8) signature 170 183 IPR015500 -
Cco07g0369 750 Gene3D - 577 704 - -
Cco07g0369 750 Pfam Peptidase inhibitor I9 4 82 IPR010259 -
Cco07g0369 750 FunFam Subtilisin-like protease SBT1.5 104 323 - -
Cco07g0369 750 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 2 82 IPR037045 -
Cco07g0369 750 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 5 696 IPR045051 -
Cco07g0369 750 CDD PA_subtilisin_like 307 431 - -
Cco07g0369 750 ProSiteProfiles Serine proteases, subtilase domain profile. 86 560 - -
Cco07g0369 750 Pfam Subtilase family 103 552 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cco07g0369 750 CDD Peptidases_S8_3 79 534 IPR034197 -
Cco07g0369 750 Gene3D - 301 438 - -
Cco07g0369 750 SUPERFAMILY Subtilisin-like 81 564 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cco07g0369 750 Pfam Fibronectin type-III domain 607 700 IPR041469 -
Cco07g0369 750 ProSitePatterns Serine proteases, subtilase family, serine active site. 499 509 IPR023828 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco07g0360 Cco-Chr7:3886612 Cco07g0369 Cco-Chr7:4020777 7.20E-08 dispersed
Cco07g0367 Cco-Chr7:3974708 Cco07g0369 Cco-Chr7:4020777 9.90E-139 dispersed
Cco07g0369 Cco-Chr7:4020777 Cco07g0711 Cco-Chr7:13051037 3.60E-192 dispersed
Cco07g0368 Cco-Chr7:4006329 Cco07g0369 Cco-Chr7:4020777 2.80E-229 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco07g0369 - - - 0.0