Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco07g0493 ATGGCAGCACAAGATCTTCCAGAAGCAAGGGCAGCCCTCAGCCTCCTCCGCAGTAGACTCTGCAACTCTAGTTTCTATTTCAAACCTCCATCCGATTCTTCTGATAGCAATTACAGCAAATTGAAGTTTATAATATCCAGTTCGGTGGCTGAAGCGTGTAATAATTCGATCCTGCTTCTTGGCCCCCGGGGTTCAGGGAAAATGGCGGTGCTGGAACTCGTTCTACAAGATCTATTGCTAGAATATCCCGATATGATTACCGTGATAAAATTGAGTGGTCTTTTGCATTGTGACGACAATGGTGCCTTCAAGGAGATTGCTAGGCAGCTTTGTTCAGAGTATCAATTATTGTTCTCAAAACTGGCATCCTTCGACGATAACTCCCAGTTTATGATAGCTATGCTTCGGGAGTGTGGCTTGGCACACAAGACAATTGTTTTTGTACTTGATGAATTTGATCTTTTTGCACAAGGAAAACAACGGTTACTTTATAGTTTGTTAGATGCCATGCAATCAGTGTCATCACAAGCTGTTGTTATTGGCATCAGTTGTCGATTGGATGCTGATCAGCTACTTGAGAAAAGAGTAAGATCTCGGTTCTCCCATAGAAAGCTGTTATTTCTTCCTCCCTGCAAGGAAGATGTGGAGAGATTGCTGGAGCACATTTTAACATTGCCAATAGACTCGGACCTTCCTCACGACTACATTATTAAATTTAATGCAAAGCTTCATAATATGTTAGCAAATGAGAGATTTAAAAAGATCATTAACACTTATTTGGACTCTGATTCGACCGTCAAACAATTAGTGAGATATCTGTTTTGTGCCATATCAAAGATGGACTTGAAATCTGGGTTGCTGACCCTTGAGAATTTTGAACATGCTCTTTCGGATATTCAGAGGCAGCCAAAGCAGGAATATATAAAAGATTGTTCCATATTGGAGCTCTATATTCTGGTATGCATGAAAAGGTTGGAAGTTAAGGAGCAGAATTCGTACAACTTCAATTCTGTAATGAAAGAGTATAAGAGTATACATGATTCATTCCGAACATCTGATTATTATTCACGAAGTGTATGCTTACGGGCTTTTGAGCACCTTCTACAGCGTGAATTGATCTGTTTCACTGACAACCGTGGACATAATCAATCAGTTGAGTTTCGACCAGTCAAGCTGTTGATAACATCTCATGAACTACATCATGGACTGAAGGCATATCGTTCATGTCCTATTACATGTCAACTCTTAATTTACTGTTGTTCGTGTACTTCCATCAATGCTGTAGTGACTCTGAAGATGGCTGTGCGTCTTTTTTCCTATGGTTTCAGACCTTTCGTCTTGTTCAAGGAGGCTCAGATCAGCGGTAAGGTCCTTATGCGAATGTCCTTTTCGGTTAGTTTTGGGCTAGGTTTGACAATTACTCAGCTCATTCCTAGAGTTAGAGGTCCGAATGTTGCTAGAGGAAAGCTGACATTGTGGTTGATTACTGCTAAAGGGTAG 1500 40.73 MAAQDLPEARAALSLLRSRLCNSSFYFKPPSDSSDSNYSKLKFIISSSVAEACNNSILLLGPRGSGKMAVLELVLQDLLLEYPDMITVIKLSGLLHCDDNGAFKEIARQLCSEYQLLFSKLASFDDNSQFMIAMLRECGLAHKTIVFVLDEFDLFAQGKQRLLYSLLDAMQSVSSQAVVIGISCRLDADQLLEKRVRSRFSHRKLLFLPPCKEDVERLLEHILTLPIDSDLPHDYIIKFNAKLHNMLANERFKKIINTYLDSDSTVKQLVRYLFCAISKMDLKSGLLTLENFEHALSDIQRQPKQEYIKDCSILELYILVCMKRLEVKEQNSYNFNSVMKEYKSIHDSFRTSDYYSRSVCLRAFEHLLQRELICFTDNRGHNQSVEFRPVKLLITSHELHHGLKAYRSCPITCQLLIYCCSCTSINAVVTLKMAVRLFSYGFRPFVLFKEAQISGKVLMRMSFSVSFGLGLTITQLIPRVRGPNVARGKLTLWLITAKG 499
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 6065376 6070444 + CcPI632755_07g004930.1 Cco07g0493 183146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco07g0493 499 Pfam Origin recognition complex (ORC) subunit 4 C-terminus 218 402 IPR032705 -
Cco07g0493 499 PIRSF ORC4 5 419 IPR016527 GO:0000808(InterPro)|GO:0003677(InterPro)|GO:0005634(InterPro)|GO:0006260(InterPro)
Cco07g0493 499 FunFam Origin of replication complex subunit 4 35 209 - -
Cco07g0493 499 Pfam AAA domain 55 181 IPR049945 GO:0016887(InterPro)
Cco07g0493 499 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 43 300 IPR027417 -
Cco07g0493 499 Gene3D - 34 209 IPR027417 -
Cco07g0493 499 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 4 9 412 IPR016527 GO:0000808(InterPro)|GO:0003677(InterPro)|GO:0003688(PANTHER)|GO:0005634(InterPro)|GO:0005664(PANTHER)|GO:0006260(InterPro)|GO:0006270(PANTHER)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco07g0493 K02606 - csv:101220845 773.467