Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco07g0523 AATTTTGGACGCCATTGTAGTTCACCTTGTGTTTGTTTGTGTGCATTCTTCTCTTCTTTGAAGAACAAAGGCCAAACAGGGAATACAGATGAGGGGTTTTCTCTTGGAGATCGAGATAAAGACGCTATGGATCTTGAGCATGGGAAGTGTTGGGATAGTTCAAAGAAGGATTCTTGGAAAACGGTTCTTGTATTGGCCTATCAAAGCCTTGGTGTCGTCTATGGCGATTTGAGCATCTCTCCTCTATACGTTTACAGAAGCACTTTTGCTGAAGACATCCAACATTCAGATACCAATGAAGAAATCTATGGTGTTCTTTCATTTGTCTTCTGGACTCTCACTATAGTCCCTCTTTTCAAATACGTCTTTGTGGTTCTCAGAGCTGATGACAATGGCGAAGGTGGGACTTTTGCTCTGTACTCGTTAATTTGTAGACATGCCAAAGTAAGCCTTCTCCCCAACAGACAAGTTGCAGATGAAGCTCTTTCCACTTACTTGCTGGAACATCCACCAGAGAAGAAGAAGCAATCTAAGGTTAAATTGCTGCTGGAGAAGCACAGAGCTCTTCACACTTCCTTGTTGATTCTTGTTCTTCTAGGTACCTGTATGGTGATTGGAGACGGGCTTCTCACTCCTGCCATTTCTGTTTTCTCAGCAGTTTCTGGACTTGAGTTATCCATGTCCAAGGCTCACCACGAGTATGCAGTGGTTCCAATCACTTGCTTTATCTTGGTTTGTCTATTTGCACTTCAACACTACGGCACACATCGAGTTGGTTTTGTATTTGCCCCCATTGTATTGGCATGGCTACTCTGCATCAGCACCCTTGGCATATACAATATTATACACTGGAATCCACGTGTTTATCAGGCTCTTTCTCCATATTACATGTTCAAGTTTTTGGAGAAGACAAGGAAGAGCGGTTGGATGTCGTTGGGGGGTATATTGTTGTGCATAACAGGCTCAGAAGCAATGTTTGCTGATCTTGGTCACTTCTCATACACTGCAATACAGATTGCTTTCACTTTCCTGGTGTATCCAGCGCTTATATTGGCATACATGGGCCAAGCTGCTTACTTATCACAACATCACCATACCACCAAAAACATTGGCTTCTACGTTTCTGTTCCAGAGAGTGTGAGATGGCCAGTGCTTACAATTGCTATACTTGCGTCGGTTGTGGGAAGCCAAGCAATCATCAGCGGAACATTCTCCATTATTAACCAGAGCCAGTCCCTTGGGTGCTTCCCTAGAGTGAAGGTTGTTCATACTTCTGATAAGATCCATGGCCAGATATACATTCCAGAGATAAATTGGATTCTTATGATTCTCTGTGTCGCCGTTACCATTGGATTTAGGGACATAAAACACCTTGGAAATGCTTCAGGTCTGGCTGTAATGACTGTGATGCTTGTGACAACCTGTCTTACATCTTTGGTGATTGTCCTGTGTTGGAACAAATCTCCACTCTTGGCTCTCTCCTTTTTGATATTCTTTGGGTCTGTTGAATTGCTCTACTTCTCAGCTTCACTCACCAAGTTCAGGGAGGGCGCTTGGCTCCCCATTCTTTTAGCTCTCTTCCTCATGACCATCATGTTTGTTTGGCACTATGCAACCATCAAGAAGTATGAATTTGATCTTCACAACAAGGTTTCATTAGAATGGTTACTAGCATTGGGGCCAAGCCTTGGGATTGCACGTGTCCCCGGCATTGGATTAGTCTTCACTGATCTCACTTCTGGCATCCCTGCCAACTTCTCTCGGTTTGTCACCAACCTCCCGGCATTTCATCGGATTCTTGTCTTTGTATGCATAAAGTCAGTACCAGTTCCTTTCGTACCTCCAGCTGAGCGATATCTCGTGGGAAGAGTTGGCCCAGCTACGCATCGATCGTACAGGTGCATTGTTCGGTATGGCTACCGTGATGTTCACCAGGACGTGGACTCATTTGAGTCTGAATTAGTCACGAAACTTGCAGACTTCATCCGCTATGATTGGTTCAGAAAGCAAAGAGGCAACTCTTGCAGTGAGGATGATGCATCCCGTTCAAATGAATCGACAAGTGAGTGCAAGCTGGCTGTGATTGGAACCATAGCATTTGCAGGTGCAACTGCCTATGAAGAGACTGTGCAGCCTGCAAGCGTATCAGTTGGGTTCCAAACTGTTGACAGCGTCGGTGATGTGATTGAAATGGAGCCACCGGGAGAAGAAAGAAGAGTCAGGTTTGCCATAGATGACGAATTTGAATGTGGCTCACGAGCTGAAACAGAAGCCCTTCTGCAAGAAGAACTAGAAGATCTTGTAGCAGCCCAGCAATCAGGGACAGCGTTCATTCTCGGGCATTCACACGTCCGGGCGAAGCAAGGATCGTCTCTGTTGAAGAGACTGGCCATTAACTATGGCTACAACTTCCTAAGAAGGAATTGCAGAGGAGCAGATGTTGCTCTTAAGGTGCCACCAGTTTCTCTTCTTGAAGTTGGCATGGTTTATGTTGTATAA 2499 44.94 NFGRHCSSPCVCLCAFFSSLKNKGQTGNTDEGFSLGDRDKDAMDLEHGKCWDSSKKDSWKTVLVLAYQSLGVVYGDLSISPLYVYRSTFAEDIQHSDTNEEIYGVLSFVFWTLTIVPLFKYVFVVLRADDNGEGGTFALYSLICRHAKVSLLPNRQVADEALSTYLLEHPPEKKKQSKVKLLLEKHRALHTSLLILVLLGTCMVIGDGLLTPAISVFSAVSGLELSMSKAHHEYAVVPITCFILVCLFALQHYGTHRVGFVFAPIVLAWLLCISTLGIYNIIHWNPRVYQALSPYYMFKFLEKTRKSGWMSLGGILLCITGSEAMFADLGHFSYTAIQIAFTFLVYPALILAYMGQAAYLSQHHHTTKNIGFYVSVPESVRWPVLTIAILASVVGSQAIISGTFSIINQSQSLGCFPRVKVVHTSDKIHGQIYIPEINWILMILCVAVTIGFRDIKHLGNASGLAVMTVMLVTTCLTSLVIVLCWNKSPLLALSFLIFFGSVELLYFSASLTKFREGAWLPILLALFLMTIMFVWHYATIKKYEFDLHNKVSLEWLLALGPSLGIARVPGIGLVFTDLTSGIPANFSRFVTNLPAFHRILVFVCIKSVPVPFVPPAERYLVGRVGPATHRSYRCIVRYGYRDVHQDVDSFESELVTKLADFIRYDWFRKQRGNSCSEDDASRSNESTSECKLAVIGTIAFAGATAYEETVQPASVSVGFQTVDSVGDVIEMEPPGEERRVRFAIDDEFECGSRAETEALLQEELEDLVAAQQSGTAFILGHSHVRAKQGSSLLKRLAINYGYNFLRRNCRGADVALKVPPVSLLEVGMVYVV 832
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 6586106 6592186 - CcPI632755_07g005230.1 Cco07g0523 183176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco07g0523 832 Pfam K+ potassium transporter C-terminal domain 569 830 IPR053952 -
Cco07g0523 832 Coils Coil 753 773 - -
Cco07g0523 832 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 52 831 IPR003855 GO:0005886(PANTHER)|GO:0006813(PANTHER)|GO:0015079(PANTHER)|GO:0015079(InterPro)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cco07g0523 832 Pfam K+ potassium transporter integral membrane domain 65 557 IPR053951 -
Cco07g0523 832 NCBIfam potassium uptake protein 65 831 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco07g0523 Cco-Chr7:6586106 Cco09g2095 Cco-Chr9:35333752 5.50E-282 dispersed
Cco07g0523 Cco-Chr7:6586106 Cco10g1428 Cco-Chr10:27365148 2.70E-289 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco07g0523 K03549 - csv:101211022 1508.43