Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cco07g0560 | ATGGAGGGATCTATAACCGGTGGTTTCTTGTCGGTTTTTCCGGTGGCGGTTGCGGTGACGGTAATTGCGATATTGGTCCATTTGTACTTTTACGGGGCGTGGAGGAGGACGGCGGAGGTAAGGAGGAAGTTGAGAGCACAAGGTGTGATAGGGCCGCCGCCGTCGGTTCTGTATGGTAACTTGCCGGAGATGCAGAAGATTCAGTTGCAGACGGCAACTATGGCTTCTCCGCCGCATGGTGCATCGGCGATTATCGCTCATGATTATACATCCACTCTCTTTCCCTATTTTGTCGAGTGGAGGAAGCAATACGGGCCATTATACACGTACTCGACAGGGATGAGGCAGCATCTGTACGCCAACAAGGTGGAGCTTGTCAAGGACTTGAACTTTTCCAACAATATCAACTTGGGGAAGCCCTTCTATGTCACCAAAAAGCTTGCTCCCATTCTTGGCCACAGCGTGGTTCGCTCGAATGGTGCCGTTTGGGCAGTGCAACGTAAGATCATTGCCCCTGAGTTCTTCATGGACCGTGTTCGGGCCATGGTGGGGCTCATGGCCGATGCAGCACTGTGCCTGATCGACAAATGGGAGAGCAGAATCGGAGACGGAGCAACCGCCGAGATTGAGGTTGATGAAGATCTAAGAGGGTTCTCGGCGGATGTCATTTCTAGAGCTTGCTTTGGGAGTTGGTATGAGAAGGGGAAGGAGATTTTCTCCAAGCTTAGGGATCTTCAGAGGTTGGTTAGCGAGGGGAGCTTTCTGTTTGGTTACATTTCTTTGAGTGATAGATTTTTTCAACGAAGCAAACACAGAAGAATAAAAAAGCTGGAGAAAGAGATTGAGTCATTAATATGGGAGACGGTTCAACAACGCCAAAAAGAGTGCTCTAAAACCTCCTCGTCGAAGAAGGATCTATTACAGCTGATAATGGAGGCCACCACCAATGACCCAAATATAGGAGCCAATGACTCTTCCAAAAACTTCATTGTTGACAACTGCAAGAGCATCTACTTTGCGGGCCATGAGTCCACCGCCGTCGCCGCCACTTGGTCCTTGATGCTCCTCGCCCTCCATCCTGAATGGCAAGATTGTATCCGATCCGAGTTTGCTCATGCTTGCCCTGACGGTCACCCCGACATGGCCGTGATTTCTCAACTCAAATCGGTAAGTATGGTGGTCCATGAAACATTGCGTTTATACCCTCCAGCAGCATTTGTGGCGAGGGAGACATTTGCCGAGATGCAGCTTGGGAACGTGGTGGTTCCAAAGGGCGTTTGCTTGTGGACTTTGATTCCGTCGCTACACAGAGAAGTCGAAATATGGGGAGAAGATGCGAATAAGTTCAAGCCAGAGCGATTTGAAAATGGCATAGCCAAGGCGTGCAAGTTCCCTCAGGCCTACGTGCCATTCGGGGCGGGCCCTAGACTATGCTTGGGGAAGAACTTTGCATTAGTTGAGTTGAAGATCATAATTTCTCTTGTAGTATCCAAGTTTAGATTATCGTTGTCTCCTGAGTATCGCCATTGTCCTTCTTATAGAATGATTGTAGAGCCTGCAAATGGTGTGAAGATTGTTTTCCAAAGGCTTTGA | 1593 | 49.09 | MEGSITGGFLSVFPVAVAVTVIAILVHLYFYGAWRRTAEVRRKLRAQGVIGPPPSVLYGNLPEMQKIQLQTATMASPPHGASAIIAHDYTSTLFPYFVEWRKQYGPLYTYSTGMRQHLYANKVELVKDLNFSNNINLGKPFYVTKKLAPILGHSVVRSNGAVWAVQRKIIAPEFFMDRVRAMVGLMADAALCLIDKWESRIGDGATAEIEVDEDLRGFSADVISRACFGSWYEKGKEIFSKLRDLQRLVSEGSFLFGYISLSDRFFQRSKHRRIKKLEKEIESLIWETVQQRQKECSKTSSSKKDLLQLIMEATTNDPNIGANDSSKNFIVDNCKSIYFAGHESTAVAATWSLMLLALHPEWQDCIRSEFAHACPDGHPDMAVISQLKSVSMVVHETLRLYPPAAFVARETFAEMQLGNVVVPKGVCLWTLIPSLHREVEIWGEDANKFKPERFENGIAKACKFPQAYVPFGAGPRLCLGKNFALVELKIIISLVVSKFRLSLSPEYRHCPSYRMIVEPANGVKIVFQRL | 530 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 7274832 | 7279190 | + | CcPI632755_07g005600.1 | Cco07g0560 | 183213 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cco07g0560 | 530 | PRINTS | E-class P450 group I signature | 329 | 346 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco07g0560 | 530 | PRINTS | E-class P450 group I signature | 468 | 478 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco07g0560 | 530 | PRINTS | E-class P450 group I signature | 349 | 375 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco07g0560 | 530 | PRINTS | E-class P450 group I signature | 101 | 120 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco07g0560 | 530 | PRINTS | E-class P450 group I signature | 218 | 236 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco07g0560 | 530 | PRINTS | E-class P450 group I signature | 478 | 501 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco07g0560 | 530 | PRINTS | E-class P450 group I signature | 391 | 409 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco07g0560 | 530 | Coils | Coil | 274 | 294 | - | - | |
| Cco07g0560 | 530 | SUPERFAMILY | Cytochrome P450 | 88 | 528 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco07g0560 | 530 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 25 | 522 | IPR050665 | GO:0004497(PANTHER) | |
| Cco07g0560 | 530 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 471 | 480 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cco07g0560 | 530 | PRINTS | P450 superfamily signature | 469 | 478 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco07g0560 | 530 | PRINTS | P450 superfamily signature | 340 | 357 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco07g0560 | 530 | PRINTS | P450 superfamily signature | 392 | 403 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco07g0560 | 530 | PRINTS | P450 superfamily signature | 478 | 489 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco07g0560 | 530 | Pfam | Cytochrome P450 | 92 | 524 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco07g0560 | 530 | Gene3D | Cytochrome P450 | 33 | 530 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cco07g0560 | Cco-Chr7:7274832 | Cco10g1506 | Cco-Chr10:28251196 | 4.20E-78 | dispersed | |
| Cco06g0836 | Cco-Chr6:10074535 | Cco07g0560 | Cco-Chr7:7274832 | 2.90E-116 | transposed | |
| Cco06g0870 | Cco-Chr6:10727201 | Cco07g0560 | Cco-Chr7:7274832 | 1.10E-12 | transposed | |
| Cco10g0748 | Cco-Chr10:11581371 | Cco07g0560 | Cco-Chr7:7274832 | 2.00E-31 | transposed | |
| Cco11g0560 | Cco-Chr11:5979096 | Cco07g0560 | Cco-Chr7:7274832 | 5.20E-89 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cco07g0560 | K20661 | - | csv:101216582 | 919.842 |