Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco07g0638 ATGACGAAGTCCAAGAGTTTTATACACAACCTCATCAGACCATTCAGATTCGGTTCCTCAAGAGATAGGCAGGGCGAGGATGATTTGGAGGAGATTGCTGCTAAGGAACAGAAGGTTATTCAGTTCGAAATCTTAGTTGAAGCTACCAATAATTTCCACCAGAATAACAAGCTTGGCCAAGGCGGATTTGGTCCAGTTTTCAAGGGGAAGTTAAAGGATGGAAGAGTTATTGCAGTTAAGAAGTTGTCGCATTATTCAAAACAAGGGAGAAAGGAGTTTATGACTGAAGCTAAATTGTTGGCTCGTGTGCAGCACAGAAATGTTGTCAATCTGTTGGGATACTGTGTGCATGGTTCAGAGAAACTACTGGTTTACGAATATGTCACGAATGAGAGCCTTGACAAGCTTCTATTTAAATCCAGCAGACGAGGAGAACTTGATTGGAAGAGGAGGTATGACATAATCTTTGGCATCGCACGAGGGTTGCAATATCTTCATGTCGACTCACATAATGTCATTATCCATCGTGACATAAAGGCTAGTAACATTCTGTTGGATGATAAATGGGTCCCTAAGATTGCAGATTTTGGCATGGCTCGTCTCTTCCCTGAAGATCAAACTCATGTCAATACTCGTGTTGCTGGTACAAACGGATATATGGCTCCCGAATATGTGATGCACGGACATCTATCTGCAAAGGCAGATGTTTTTAGCTTTGGTGTTTTGGTTTTGGAACTTATAAGCGGCCAGCGAAATTCGTCATTTAGTTCATTTATGGATGCCGAGAATCTACTTGATTGGGCTTACAAGCTATACAAGAAGGGCAGGAGCTTGGAAATCATGGACCCAACATTAGCATCATCAGCTGTTCCTGACCAAGTTACAATGTGCATTCAGATAGGATTGCTCTGCACACAAGGCGATCCGCACCTACGGCCAGCCATGCCACGTGTAGTTTTAATCCTTTCGAAGAGACATGGTAATTTGGACGAACCAACAAGACCAGGAATACCCGGGTCTCGGTATAGAAGATCTCGTAGGACAAGTGCATCGTCCTCCAACGCTGGTACTTCGGGAACTTCTGGTGCATCCGACTCCTATGCTATGACGAGCAATACTACTGGAACTATAACTGCTACCGCAACGGCAACAGCAAACGAACTTGCTTCTGGTTCCTCTCCTGTTAGCCGAGTATCTGCAACAGGAAATGAAGTTGCTTCTGGTTCTTCTTCAGTTAGTCAAGGATACGATACTCGTGGGAAACGTCCGATAGAAGGTTAG 1281 44.11 MTKSKSFIHNLIRPFRFGSSRDRQGEDDLEEIAAKEQKVIQFEILVEATNNFHQNNKLGQGGFGPVFKGKLKDGRVIAVKKLSHYSKQGRKEFMTEAKLLARVQHRNVVNLLGYCVHGSEKLLVYEYVTNESLDKLLFKSSRRGELDWKRRYDIIFGIARGLQYLHVDSHNVIIHRDIKASNILLDDKWVPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSAKADVFSFGVLVLELISGQRNSSFSSFMDAENLLDWAYKLYKKGRSLEIMDPTLASSAVPDQVTMCIQIGLLCTQGDPHLRPAMPRVVLILSKRHGNLDEPTRPGIPGSRYRRSRRTSASSSNAGTSGTSGASDSYAMTSNTTGTITATATATANELASGSSPVSRVSATGNEVASGSSSVSQGYDTRGKRPIEG 426
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 10124302 10129305 + CcPI632755_07g006380.1 Cco07g0638 183291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco07g0638 426 ProSiteProfiles Protein kinase domain profile. 52 329 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cco07g0638 426 MobiDBLite consensus disorder prediction 385 426 - -
Cco07g0638 426 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cco07g0638 426 Pfam Protein tyrosine and serine/threonine kinase 53 317 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cco07g0638 426 FunFam Cysteine-rich receptor-like protein kinase 10 16 127 - -
Cco07g0638 426 SUPERFAMILY Protein kinase-like (PK-like) 38 340 IPR011009 -
Cco07g0638 426 MobiDBLite consensus disorder prediction 385 417 - -
Cco07g0638 426 MobiDBLite consensus disorder prediction 344 368 - -
Cco07g0638 426 Gene3D Phosphorylase Kinase; domain 1 17 127 - -
Cco07g0638 426 Gene3D Transferase(Phosphotransferase) domain 1 128 332 - -
Cco07g0638 426 FunFam Cysteine-rich receptor-like protein kinase 10 129 334 - -
Cco07g0638 426 CDD STKc_IRAK 58 324 - -
Cco07g0638 426 MobiDBLite consensus disorder prediction 327 368 - -
Cco07g0638 426 SMART serkin_6 52 329 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cco07g0638 426 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 32 358 IPR052059 GO:0004674(PANTHER)|GO:0006468(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco07g0638 Cco-Chr7:10124302 Cco10g0590 Cco-Chr10:7796754 1.20E-80 dispersed
Cco07g0638 Cco-Chr7:10124302 Cco04g2026 Cco-Chr4:34328358 5.80E-86 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
86963 PF00069 Pkinase 2.90E-49 CL0016 Cco PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco07g0638 - - - 0.0