Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco07g0706 | ATGAGTGATAGGACACACTATGGCCGCATCCATTGTGCCCTTAGGATAAGCCAAACAATGGGGTTTAGAGAAGTGCTGCTGTTTTTGTCAATAACAATACTCGCAACTTCAAGTGCTGCTATGGATCAACAAACTTACATAATTCACATGGACACCACAAAGATGGCCACCAACAACAACCCTGAACAATGGTACACAACAATGATTGATTCACTCAGTGAACTCTCGTCTCTAGACGACGACAACAACAAAGAAGTATCAAACCCTGCCGAGATTCTCTACGTCTACAAAACTGCCATTTCAGGTTTTGCTGCAAAGCTGTCCACAAAAAACCTTCATTCTTTAAGCAAAATTCCTGGCTTTCTAGCCGCCACTCCAAATGAACTACTACAGCTTCACACCACTCACTCCCCTCAGTTTCTTGGCCTACAAAGAGGGCGTGGCCTATGGAATACTTCAAATTTAGCTTCTGATATTATTATTGGTTTGCTTGACACTGGCATTTGGCCCGAGCATATAAGTTTCCAAGACAAGGGTCTGCCCCCTGTGCCCTCAAAATGGAAAGGCATTTGTGAAGTAGGCCCAAAGTTCTCACCTTCAAATTGTAACAAAAAGCTCATTGGAGCAAGAGCCTACATTAAAGGCTACGAGGCTGTCATTGGTAGATTGAATGCAACAGGGGCGTTTCGATCGCCCCGAGACTCGGATGGGCACGGGACACACACGGCATCAACTGCTGCTGGAAATATTGTAAACAAAGCAAGCTTTTATAACCTAGGGATGGGAGTAGCCGCTGGAATGAGGTTTACTTCAAGGATCGCAGCATACAAGGTATGTTGGCCGGAAGGGTGTGCTAGTGCCGATATTTTGGCAGCCATGGATCACGCTATTGCCGACGGTGTTGATGTTCTATCAATATCCTTGGGCGGCGGTTCGGGTATTTTTTACAGCGACGAAATCGCCATAGCTGCATTTGGTGCTGTTCAAAATGGGGTTTTTGTGTCATGTTCAGCTGGTAATTCTGGCCCATTTATCTCAACTGTTGGTAATGTAGCACCATGGATCATGACAGTTGCTGCTAGTTACACTGATAGAACCTTCCCAACCACTATAAAGCTTGGAAATGGAAAAGTTTTTGAAGGGTCTTCTTTGTATTTTGGCAAGAACATAAATGCACTCCCACTTTATTATAACAATACTGCTGGTTATGGACAAGAAATAAATCTTTGCACTGCTGGTTCACTTGTCCCATCAATGGTGAAGGGAAAAATTGTTGTATGTGAAAGAGGAACAAATTCAAGAACTGAAAAAGGAGAGCAAGTGAAATTAGCAGGAGGAGCTGGTATGATTTTAATCAACACACAACTTGAAGGTGAAGAGCTTTTAGCTGACTCTCATGTTTTACCAGCCACTTCTGTTGGAGTTTCAGCTGGCAAAGCCATCATAGACTATATAGCTTCCGCGAAACGTCAAGCGAAAGCTTCCATCACGTTCAAAGGGACTAAATATGGAAGCCGAGCGCCTAGAGTGGCTGCATTTTCTTCTCGAGGGCCTAGCTTTTTTAAACCATACGTGATAAAGCCAGACATAACCGCACCGGGTGTTAATATATTAGCCGCTTGGCCGCCCATTGTGAGCCCAAGTGAGCTCAAGTCTGATAAAAGAAGAGTATTGTTCAATATCATTTCAGGGACTTCTATGTCTTGTCCTCATGTTAGTGGTTTAGCTGCATTGCTTAAATCAGCTCACAAGGATTGGTCGCCTGCGGCTATTAAATCGGCGCTCATGACAACAGCTTACATTACTGACAACAAGAAGCATCTCATTTCCGACGTTGGTCATGCTAGTGGCCGTGATCCTGCGGACCCTTTTGCGTTTGGTTCAGGCCATGTTGATCCCGAGAAAGCTTCCGATCCAGGGTTCGTCTATGATATCACTCCCCAAGACTACATAAATTACTTGTGTAGCTTGAAGTATAACTCAACACAAATTGCTTTAGTTTCAAGAGGGAAATTCAGATGTTCATCAAAAAGAACGATTCGTCAGCCAGGAGACTTGAACTACCCTTCTTTCTCTGTGTTCATGAAGAAGGAGGCCAAAAATGTTACTATTACATTCAAGAGAACAGTGACAAATGTTGGTATCCCAAAGAGTGATTACACAGTTAAAATCAACAATCCAAAAGGAATAAGAATTATTGTGAAGCCTGAGAAGTTAAGTTTTGTGAGATTGGGAGAGAAGTTGAGTTACAAAGTGAGTTTTGTTGGATTGGGGGAAAAAGAAGATTTGGATGAGTTTTCTCCTGGATCTTCGTGTGAGTTTTCTTTTGGATCTATTGTTTGGCAGTCAGGAAAATATGTTGTTAGAAGTCCTATAGCAGTAACTTGGAAGTAG | 2394 | 42.94 | MSDRTHYGRIHCALRISQTMGFREVLLFLSITILATSSAAMDQQTYIIHMDTTKMATNNNPEQWYTTMIDSLSELSSLDDDNNKEVSNPAEILYVYKTAISGFAAKLSTKNLHSLSKIPGFLAATPNELLQLHTTHSPQFLGLQRGRGLWNTSNLASDIIIGLLDTGIWPEHISFQDKGLPPVPSKWKGICEVGPKFSPSNCNKKLIGARAYIKGYEAVIGRLNATGAFRSPRDSDGHGTHTASTAAGNIVNKASFYNLGMGVAAGMRFTSRIAAYKVCWPEGCASADILAAMDHAIADGVDVLSISLGGGSGIFYSDEIAIAAFGAVQNGVFVSCSAGNSGPFISTVGNVAPWIMTVAASYTDRTFPTTIKLGNGKVFEGSSLYFGKNINALPLYYNNTAGYGQEINLCTAGSLVPSMVKGKIVVCERGTNSRTEKGEQVKLAGGAGMILINTQLEGEELLADSHVLPATSVGVSAGKAIIDYIASAKRQAKASITFKGTKYGSRAPRVAAFSSRGPSFFKPYVIKPDITAPGVNILAAWPPIVSPSELKSDKRRVLFNIISGTSMSCPHVSGLAALLKSAHKDWSPAAIKSALMTTAYITDNKKHLISDVGHASGRDPADPFAFGSGHVDPEKASDPGFVYDITPQDYINYLCSLKYNSTQIALVSRGKFRCSSKRTIRQPGDLNYPSFSVFMKKEAKNVTITFKRTVTNVGIPKSDYTVKINNPKGIRIIVKPEKLSFVRLGEKLSYKVSFVGLGEKEDLDEFSPGSSCEFSFGSIVWQSGKYVVRSPIAVTWK | 797 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 12620244 | 12625258 | - | CcPI632755_07g007060.1 | Cco07g0706 | 183359 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco07g0706 | 797 | CDD | PA_subtilisin_like | 370 | 489 | - | - | |
Cco07g0706 | 797 | CDD | Peptidases_S8_3 | 130 | 600 | IPR034197 | - | |
Cco07g0706 | 797 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 31 | 133 | IPR037045 | - | |
Cco07g0706 | 797 | PRINTS | Subtilisin serine protease family (S8) signature | 563 | 579 | IPR015500 | - | |
Cco07g0706 | 797 | PRINTS | Subtilisin serine protease family (S8) signature | 156 | 175 | IPR015500 | - | |
Cco07g0706 | 797 | PRINTS | Subtilisin serine protease family (S8) signature | 234 | 247 | IPR015500 | - | |
Cco07g0706 | 797 | FunFam | subtilisin-like protease SBT1.5 | 364 | 503 | - | - | |
Cco07g0706 | 797 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 45 | 792 | IPR045051 | - | |
Cco07g0706 | 797 | SUPERFAMILY | Subtilisin-like | 132 | 640 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Cco07g0706 | 797 | Gene3D | - | 364 | 503 | - | - | |
Cco07g0706 | 797 | Pfam | Subtilase family | 157 | 628 | IPR000209 | GO:0006508(InterPro)|GO:0008236(InterPro) | |
Cco07g0706 | 797 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 140 | 637 | - | - | |
Cco07g0706 | 797 | ProSitePatterns | Serine proteases, subtilase family, aspartic acid active site. | 161 | 172 | IPR023827 | - | |
Cco07g0706 | 797 | FunFam | Subtilisin-like protease SBT1.5 | 158 | 375 | - | - | |
Cco07g0706 | 797 | Gene3D | - | 654 | 796 | - | - | |
Cco07g0706 | 797 | Pfam | PA domain | 410 | 481 | IPR003137 | - | |
Cco07g0706 | 797 | Pfam | Fibronectin type-III domain | 685 | 794 | IPR041469 | - | |
Cco07g0706 | 797 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 564 | 574 | IPR023828 | - | |
Cco07g0706 | 797 | SUPERFAMILY | PA domain | 417 | 490 | IPR046450 | - | |
Cco07g0706 | 797 | Gene3D | Peptidase S8/S53 domain | 158 | 650 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Cco07g0706 | 797 | FunFam | Subtilisin-like protease SBT1.5 | 654 | 797 | - | - | |
Cco07g0706 | 797 | Pfam | Peptidase inhibitor I9 | 45 | 133 | IPR010259 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco07g0138 | Cco-Chr7:1442141 | Cco07g0706 | Cco-Chr7:12620244 | 3.50E-182 | dispersed | |
Cco07g0706 | Cco-Chr7:12620244 | Cco09g0103 | Cco-Chr9:902807 | 1.30E-200 | dispersed | |
Cco07g0706 | Cco-Chr7:12620244 | Cco07g0708 | Cco-Chr7:12665285 | 0.00E+00 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco07g0706 | - | - | - | 0.0 |