Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco07g0706 ATGAGTGATAGGACACACTATGGCCGCATCCATTGTGCCCTTAGGATAAGCCAAACAATGGGGTTTAGAGAAGTGCTGCTGTTTTTGTCAATAACAATACTCGCAACTTCAAGTGCTGCTATGGATCAACAAACTTACATAATTCACATGGACACCACAAAGATGGCCACCAACAACAACCCTGAACAATGGTACACAACAATGATTGATTCACTCAGTGAACTCTCGTCTCTAGACGACGACAACAACAAAGAAGTATCAAACCCTGCCGAGATTCTCTACGTCTACAAAACTGCCATTTCAGGTTTTGCTGCAAAGCTGTCCACAAAAAACCTTCATTCTTTAAGCAAAATTCCTGGCTTTCTAGCCGCCACTCCAAATGAACTACTACAGCTTCACACCACTCACTCCCCTCAGTTTCTTGGCCTACAAAGAGGGCGTGGCCTATGGAATACTTCAAATTTAGCTTCTGATATTATTATTGGTTTGCTTGACACTGGCATTTGGCCCGAGCATATAAGTTTCCAAGACAAGGGTCTGCCCCCTGTGCCCTCAAAATGGAAAGGCATTTGTGAAGTAGGCCCAAAGTTCTCACCTTCAAATTGTAACAAAAAGCTCATTGGAGCAAGAGCCTACATTAAAGGCTACGAGGCTGTCATTGGTAGATTGAATGCAACAGGGGCGTTTCGATCGCCCCGAGACTCGGATGGGCACGGGACACACACGGCATCAACTGCTGCTGGAAATATTGTAAACAAAGCAAGCTTTTATAACCTAGGGATGGGAGTAGCCGCTGGAATGAGGTTTACTTCAAGGATCGCAGCATACAAGGTATGTTGGCCGGAAGGGTGTGCTAGTGCCGATATTTTGGCAGCCATGGATCACGCTATTGCCGACGGTGTTGATGTTCTATCAATATCCTTGGGCGGCGGTTCGGGTATTTTTTACAGCGACGAAATCGCCATAGCTGCATTTGGTGCTGTTCAAAATGGGGTTTTTGTGTCATGTTCAGCTGGTAATTCTGGCCCATTTATCTCAACTGTTGGTAATGTAGCACCATGGATCATGACAGTTGCTGCTAGTTACACTGATAGAACCTTCCCAACCACTATAAAGCTTGGAAATGGAAAAGTTTTTGAAGGGTCTTCTTTGTATTTTGGCAAGAACATAAATGCACTCCCACTTTATTATAACAATACTGCTGGTTATGGACAAGAAATAAATCTTTGCACTGCTGGTTCACTTGTCCCATCAATGGTGAAGGGAAAAATTGTTGTATGTGAAAGAGGAACAAATTCAAGAACTGAAAAAGGAGAGCAAGTGAAATTAGCAGGAGGAGCTGGTATGATTTTAATCAACACACAACTTGAAGGTGAAGAGCTTTTAGCTGACTCTCATGTTTTACCAGCCACTTCTGTTGGAGTTTCAGCTGGCAAAGCCATCATAGACTATATAGCTTCCGCGAAACGTCAAGCGAAAGCTTCCATCACGTTCAAAGGGACTAAATATGGAAGCCGAGCGCCTAGAGTGGCTGCATTTTCTTCTCGAGGGCCTAGCTTTTTTAAACCATACGTGATAAAGCCAGACATAACCGCACCGGGTGTTAATATATTAGCCGCTTGGCCGCCCATTGTGAGCCCAAGTGAGCTCAAGTCTGATAAAAGAAGAGTATTGTTCAATATCATTTCAGGGACTTCTATGTCTTGTCCTCATGTTAGTGGTTTAGCTGCATTGCTTAAATCAGCTCACAAGGATTGGTCGCCTGCGGCTATTAAATCGGCGCTCATGACAACAGCTTACATTACTGACAACAAGAAGCATCTCATTTCCGACGTTGGTCATGCTAGTGGCCGTGATCCTGCGGACCCTTTTGCGTTTGGTTCAGGCCATGTTGATCCCGAGAAAGCTTCCGATCCAGGGTTCGTCTATGATATCACTCCCCAAGACTACATAAATTACTTGTGTAGCTTGAAGTATAACTCAACACAAATTGCTTTAGTTTCAAGAGGGAAATTCAGATGTTCATCAAAAAGAACGATTCGTCAGCCAGGAGACTTGAACTACCCTTCTTTCTCTGTGTTCATGAAGAAGGAGGCCAAAAATGTTACTATTACATTCAAGAGAACAGTGACAAATGTTGGTATCCCAAAGAGTGATTACACAGTTAAAATCAACAATCCAAAAGGAATAAGAATTATTGTGAAGCCTGAGAAGTTAAGTTTTGTGAGATTGGGAGAGAAGTTGAGTTACAAAGTGAGTTTTGTTGGATTGGGGGAAAAAGAAGATTTGGATGAGTTTTCTCCTGGATCTTCGTGTGAGTTTTCTTTTGGATCTATTGTTTGGCAGTCAGGAAAATATGTTGTTAGAAGTCCTATAGCAGTAACTTGGAAGTAG 2394 42.94 MSDRTHYGRIHCALRISQTMGFREVLLFLSITILATSSAAMDQQTYIIHMDTTKMATNNNPEQWYTTMIDSLSELSSLDDDNNKEVSNPAEILYVYKTAISGFAAKLSTKNLHSLSKIPGFLAATPNELLQLHTTHSPQFLGLQRGRGLWNTSNLASDIIIGLLDTGIWPEHISFQDKGLPPVPSKWKGICEVGPKFSPSNCNKKLIGARAYIKGYEAVIGRLNATGAFRSPRDSDGHGTHTASTAAGNIVNKASFYNLGMGVAAGMRFTSRIAAYKVCWPEGCASADILAAMDHAIADGVDVLSISLGGGSGIFYSDEIAIAAFGAVQNGVFVSCSAGNSGPFISTVGNVAPWIMTVAASYTDRTFPTTIKLGNGKVFEGSSLYFGKNINALPLYYNNTAGYGQEINLCTAGSLVPSMVKGKIVVCERGTNSRTEKGEQVKLAGGAGMILINTQLEGEELLADSHVLPATSVGVSAGKAIIDYIASAKRQAKASITFKGTKYGSRAPRVAAFSSRGPSFFKPYVIKPDITAPGVNILAAWPPIVSPSELKSDKRRVLFNIISGTSMSCPHVSGLAALLKSAHKDWSPAAIKSALMTTAYITDNKKHLISDVGHASGRDPADPFAFGSGHVDPEKASDPGFVYDITPQDYINYLCSLKYNSTQIALVSRGKFRCSSKRTIRQPGDLNYPSFSVFMKKEAKNVTITFKRTVTNVGIPKSDYTVKINNPKGIRIIVKPEKLSFVRLGEKLSYKVSFVGLGEKEDLDEFSPGSSCEFSFGSIVWQSGKYVVRSPIAVTWK 797
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 12620244 12625258 - CcPI632755_07g007060.1 Cco07g0706 183359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco07g0706 797 CDD PA_subtilisin_like 370 489 - -
Cco07g0706 797 CDD Peptidases_S8_3 130 600 IPR034197 -
Cco07g0706 797 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 31 133 IPR037045 -
Cco07g0706 797 PRINTS Subtilisin serine protease family (S8) signature 563 579 IPR015500 -
Cco07g0706 797 PRINTS Subtilisin serine protease family (S8) signature 156 175 IPR015500 -
Cco07g0706 797 PRINTS Subtilisin serine protease family (S8) signature 234 247 IPR015500 -
Cco07g0706 797 FunFam subtilisin-like protease SBT1.5 364 503 - -
Cco07g0706 797 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 45 792 IPR045051 -
Cco07g0706 797 SUPERFAMILY Subtilisin-like 132 640 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cco07g0706 797 Gene3D - 364 503 - -
Cco07g0706 797 Pfam Subtilase family 157 628 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cco07g0706 797 ProSiteProfiles Serine proteases, subtilase domain profile. 140 637 - -
Cco07g0706 797 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 161 172 IPR023827 -
Cco07g0706 797 FunFam Subtilisin-like protease SBT1.5 158 375 - -
Cco07g0706 797 Gene3D - 654 796 - -
Cco07g0706 797 Pfam PA domain 410 481 IPR003137 -
Cco07g0706 797 Pfam Fibronectin type-III domain 685 794 IPR041469 -
Cco07g0706 797 ProSitePatterns Serine proteases, subtilase family, serine active site. 564 574 IPR023828 -
Cco07g0706 797 SUPERFAMILY PA domain 417 490 IPR046450 -
Cco07g0706 797 Gene3D Peptidase S8/S53 domain 158 650 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cco07g0706 797 FunFam Subtilisin-like protease SBT1.5 654 797 - -
Cco07g0706 797 Pfam Peptidase inhibitor I9 45 133 IPR010259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco07g0138 Cco-Chr7:1442141 Cco07g0706 Cco-Chr7:12620244 3.50E-182 dispersed
Cco07g0706 Cco-Chr7:12620244 Cco09g0103 Cco-Chr9:902807 1.30E-200 dispersed
Cco07g0706 Cco-Chr7:12620244 Cco07g0708 Cco-Chr7:12665285 0.00E+00 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco07g0706 - - - 0.0