Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco07g0709 ATGTCGATATCAAAATCTTCTCGAGTTTTCATCTTCGTTCTTTTCTTTGCCGCTGGATGCATTGCTGCCGTAGAAATCAACGAGGACAAGAAACATTTCATTGTTTTCCTGGAGAATAGACCTGCTATTTTAAATGAGGTTGATGCTGTGGAAACACATCTCAATGTTCTCATGTCAGTGAAGGAAAGTCATGTGGAAGCAAAAGAGGCGATGGTCTACAGTTACACAAAGAATTTTAATGCCTTTGCTGCCAAGCTTACCGAGGAGGAGGCCAAAAAATTGTCGGAGAGGGGAGACGTGCATCATGTGATCCCAAACAAGTATAGAAAGCTACAAACAACAAGATCTTGGGACTTCCTAGGATTTCCTCCCAATGCAAGAAGAAAAACCAGACAGGAGAGTAACATCATTGTGGGTTTATTTGATACCGGGATCACTCCAACGGCCGATAGCTTTAATGATGATGGGTTTGGTCCTCCGCCCAAAAAATGGAAAGGCACCTGTCTTCACTTGGCAAATTTCACCGGCTGCAACAACAAACTGATCGGAGCAAGATATTTCAAGCTCGATGGCATGCCGGACCCCCTTGACATTTTGTCGCCAGTAGACGTTAACGGCCACGGCACACACACGTCCTCAACAGCCACCGGCAATGCGATCGCTGGAGCCAGCCTCTCTGGCCTGGCTCAAGGAACTGCCCGTGGCGGCGTGCCATCGGCCAGAGTTGCCATGTACAAGGTCTGCTGGACTAGCACCGGATGCTCCGATATGGATCTTCTGGCTGCCTTCGACGCCGCCATACAGGACGGCGTTGATGTCATTTCAATATCGATCGCTGGCATTGGCTTCAGCAATTACACCGACGACCCGATCTCCATTGGCGCGTTTCATGCCATGAAGAAGGGCATCATCACCGTGACGGCCGCCGGCAACAATGGCCCGACTGCCGGCACCATTGTGAACCACGCGCCGTGGATATTGACAGTTGCTGCCAGTTCAATTGATCGGAAATTTATCAGCCCATTGGAGTTGGGCAATGGGAACAACATCTCTGGAGTAGGAATAAACCTATTCAATCCACAGAAAAAAATGTACAATTTAGTGAGTGGAGGTGATGTGGCAAATAACATAGAGAGCAAAGATAGTGCAATGTTTTGTGTAGAGGGCTCACTTGATCCAAACAAGGTCAAAGACAGCCTTGTTTTCTGCAAATTGATGACTTGGGGAGCTGATTCTGTTGTCAAATCAATTGGTGCTAATGGTGCCATCCTTCAAAGTGACCAGTTTCTTGACAATACTGATATCTTCATGGCCCCTTCCACCTTGGTTAGTGGTTTTGTTGGTGTTACTATTGACTCCTACATCCACTCCACAAGAACACCGACGGCAGTGATATACAAAACAAGACAACTCAAAGCAGCAGCTCCATTTGTCGCTGCCTTTTCATCCAGAGGCCCAAATCCAGGCTCCAACCGCATTCTAAAGCCGGACATAGCAGCGCCAGGAGTAGACATATTGGCTGGTTACACACCATTGAAGTCACTGACGGGGCTAAAGGGTGACACCCAATTCTCCAAATTCACACTCATGTCTGGCACTTCTATGGCTTGCCCCCACGTCGCGGCTACCGCCGCCTACGTCAAGTCTTTCCACCCTCTTTTGTCTCCCGCCGCCATTAGATCCGCCTTGCTCACCACCGCGAGACCAATTAGTCGACGACGGAATCCCGACGGAGAATTCGGTTACGGCTCCGGCAACCTAAATCCAGCTAAAGCCACAAACCCCGGCCTAATCTACGACCTCCACGATATGTCGTACATTCAATTCCTTTGCAGTGAAGGTTACACTGGATCTTCAATTGCAATCCTCACTGGAAGCAAATCCATAAACTGCTCCACAATAATCCCTGGCCAAGGTTATGACTCTCTCAATTACCCAACCTTTCAAGTTCGCCTTAGAAGCACCCAACAATCAACGACCGCCGTGTTCTGGCGGGAAGTAACCAATGTCGGTCGTCCTGTCTCTGTATACAATGCGACAATCAGGGCTCCCCCTGGAGTGGAGATCACAGTGGTGCCATCGACTCTGTCCTTCTCACAGCTGCTACAAAAGCAGAGGTTTAAGGTTGTTGTGAAGGCTAGTCCATTGTCATCGACAAAAATGGTGTCGGGTTGGATTGCTTGGGTTGATGCTCGACATGTTGTGAGAAGTCCGATTGTTGTTTATAGCCCATGA 2235 48.64 MSISKSSRVFIFVLFFAAGCIAAVEINEDKKHFIVFLENRPAILNEVDAVETHLNVLMSVKESHVEAKEAMVYSYTKNFNAFAAKLTEEEAKKLSERGDVHHVIPNKYRKLQTTRSWDFLGFPPNARRKTRQESNIIVGLFDTGITPTADSFNDDGFGPPPKKWKGTCLHLANFTGCNNKLIGARYFKLDGMPDPLDILSPVDVNGHGTHTSSTATGNAIAGASLSGLAQGTARGGVPSARVAMYKVCWTSTGCSDMDLLAAFDAAIQDGVDVISISIAGIGFSNYTDDPISIGAFHAMKKGIITVTAAGNNGPTAGTIVNHAPWILTVAASSIDRKFISPLELGNGNNISGVGINLFNPQKKMYNLVSGGDVANNIESKDSAMFCVEGSLDPNKVKDSLVFCKLMTWGADSVVKSIGANGAILQSDQFLDNTDIFMAPSTLVSGFVGVTIDSYIHSTRTPTAVIYKTRQLKAAAPFVAAFSSRGPNPGSNRILKPDIAAPGVDILAGYTPLKSLTGLKGDTQFSKFTLMSGTSMACPHVAATAAYVKSFHPLLSPAAIRSALLTTARPISRRRNPDGEFGYGSGNLNPAKATNPGLIYDLHDMSYIQFLCSEGYTGSSIAILTGSKSINCSTIIPGQGYDSLNYPTFQVRLRSTQQSTTAVFWREVTNVGRPVSVYNATIRAPPGVEITVVPSTLSFSQLLQKQRFKVVVKASPLSSTKMVSGWIAWVDARHVVRSPIVVYSP 744
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 12792063 12800994 - CcPI632755_07g007090.1 Cco07g0709 183362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco07g0709 744 Gene3D - 335 471 - -
Cco07g0709 744 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Cco07g0709 744 Pfam Subtilase family 134 583 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cco07g0709 744 Gene3D Peptidase S8/S53 domain 135 606 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cco07g0709 744 Gene3D - 610 743 - -
Cco07g0709 744 ProSiteProfiles Serine proteases, subtilase domain profile. 116 593 - -
Cco07g0709 744 Pfam Fibronectin type-III domain 643 741 IPR041469 -
Cco07g0709 744 CDD PA_subtilisin_like 342 465 - -
Cco07g0709 744 PRINTS Subtilisin serine protease family (S8) signature 203 216 IPR015500 -
Cco07g0709 744 PRINTS Subtilisin serine protease family (S8) signature 133 152 IPR015500 -
Cco07g0709 744 PRINTS Subtilisin serine protease family (S8) signature 531 547 IPR015500 -
Cco07g0709 744 SUPERFAMILY Subtilisin-like 111 597 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cco07g0709 744 CDD Peptidases_S8_3 110 567 IPR034197 -
Cco07g0709 744 Pfam Peptidase inhibitor I9 33 112 IPR010259 -
Cco07g0709 744 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 61 739 IPR045051 -
Cco07g0709 744 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 112 IPR037045 -
Cco07g0709 744 ProSitePatterns Serine proteases, subtilase family, serine active site. 532 542 IPR023828 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco07g0709 Cco-Chr7:12792063 Cco10g1903 Cco-Chr10:32583886 2.50E-145 dispersed
Cco07g0709 Cco-Chr7:12792063 Cco07g0711 Cco-Chr7:13051037 0.00E+00 proximal
Cco07g0708 Cco-Chr7:12665285 Cco07g0709 Cco-Chr7:12792063 4.00E-109 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco07g0709 - - - 0.0