Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco07g0711 ATGTTTGCCATGTCGATATCGAAATCTTCCCGTCTTGTCGTCTTTGTTATTTTGTTTGTTGTAGGATATGTTGCTGGCTTAGACGAGGAGGAGGAAAAGACTCATTTCATTGTTTTCCTTGAAAATAAACCTATTTTAAATGAGGTTGATGCAGTAGAAACACATCTAAATGTTCTCATGTCAGTGAAAGAAAGCCATGCGGAGGCAAGGGAGTCGATGGTCTATAGTTACACGAAAAGCTTCAACGCCTTTGCTGCCAAACTTACCGAAGAGGAAGCCAAACAATTGTCAACGAGGGAAGATGTGCATCATGTGATCCCAAACAAGTATAGAAAGCTACAAACAACAAGATCTTGGGACTTCATTGGATTGTCTTCCAATGCAAGAAGAAATACCAAACAGGAGAGTGACATCATTGTGGGTTTATTTGATACCGGGATCACTCCAACTGCCGATAGCTTTAAAGATGATGGGTTTGGTCCTCCACCCAAAAAATGGAAAGGCACTTGTCACCACTTTGCCAATTTCACTGGCTGCAATAAAAAGCTTATCGGAGCAAGATATTTCAAGCTCGATGGCAGCCCCGATCCCGCCGACATCTTGTCACCAGTAGATGCCGATGGCCATGGCACGCACACATCGTCAACAGCAACGGGCAATGCAGTTGCTGGAGCCAGCCTCTCCGGTCTGGCCGAAGGAACCGCCCGCGGAGGGGTACCGTCAGCAAGAGTTGCCATGTATAAGGTCTGCTGGGCTAGTAGTGGGTGCTCCGATATGGATATTCTGGCTGCCTTCGACGCCGCTATACAGGATGGTGTCGATGTCATTTCGATATCGATTGGCGGTGGCAGCTTCAACAATTACTCCGATGACTCGATCTCCATCGGTGCGTTTCATGCCATGAAGAAGGGCATCATCACCGTGACCTCCGCCGGCAACAGTGGTCCGACTGCCGGCAGTGTTGTCAACCACGCGCCGTGGATTGTGACGGTTGCTGCTAGTGCGATTGATCGGAAATTTATCAGCCCATTAGAGTTGGGCAATGGGAAGAACATCTCTGGAGTAGGGATAAACATCTTCAATCCAAAGCAAAAAATGTACCCATTAGTGAGTGGAGGGGATGTGGCGAGGAACTCAGAAAGCAAAGACAGTGCAAGCTATTGTGAAGAGGACTCACTTGATCCAGCCAAAGTCAAAGGCAGCCTTGTTTTCTGTAAATTGATGACTTGGGGAGCTGATTCTGTTATCAAATCACTTGGTGCTAATGGTGTTATCATTCAGAGTGATCACTTTCTTGACAATGCTGATATCTTCATGGCCCCTGCCACCATGGTTAGCAGCTCTGTTGGTGCTACTATTCACACCTACATCAAGTCTACCAGAACACCAACGGCAGTAATATACAAAACAAGACAACTCAAGGCAACAGCTCCCGTGGTAGGTTCCTTCTCATCCAGAGGCCCGAATCCAGGATCCAACCGCATTCTAAAGCCGGACATAGCAGCACCAGGAGTGGACATATTGGCTGGTTACACACCATTGAAGTCACTGACGGGGCTAAAGGGTGACACCCAATTCTCCAAATTCACACTCATGTCTGGCACTTCCATGGCTTGCCCCCACGTCGCGGCTGCCGCCGCCTACGTCAAGTCTTTCCACCCTCTTTGGTCTCCCGCCGCCATTAGATCCGCCTTGCTCACCACTGCGAGACCGATAAGCCGACGACTAAACCCGGACGGCGAATTTGCATTCGGCGCTGGCAACCTAAATCCATCAAGAGCCATAAGTCCTGGTCTAATCTACGATCTCAATGAAATGTCGTACATCCAATTCCTTTGCCGCGAAGGCTACACCGGATCTTCAATCGCCGTCCTCGCCGGAACCAAAACCATAAACTGCTCCACTCTAATCCCCGGCCAAGGACATGACGCTCTCAATTATCCAACCTTTCAACTCAGCCTCAAAAGCACCCAAAGACCGACCACCACAACGTTTCGACGACGAGTCACTAACGTGGCTCACCCCGTCTCTGTCTACAATGCCACCATCAAGGCTCCTCCAGGGGTGGAGATCACAGTTACGCCGACCACTCTGTCATTTTCACGGTTGCTGCAGAAGAAGAGTTTTAAGGTTGTTGTGAAGGCAAGTCCTTTGCCGTCGGGGAAAATGGTGTCGGGTTCTCTTGCTTGGATTGGTGTTCGACATGTTGTGAGAAGTCCTATTGTTGTTTATAGCCCATGA 2241 48.91 MFAMSISKSSRLVVFVILFVVGYVAGLDEEEEKTHFIVFLENKPILNEVDAVETHLNVLMSVKESHAEARESMVYSYTKSFNAFAAKLTEEEAKQLSTREDVHHVIPNKYRKLQTTRSWDFIGLSSNARRNTKQESDIIVGLFDTGITPTADSFKDDGFGPPPKKWKGTCHHFANFTGCNKKLIGARYFKLDGSPDPADILSPVDADGHGTHTSSTATGNAVAGASLSGLAEGTARGGVPSARVAMYKVCWASSGCSDMDILAAFDAAIQDGVDVISISIGGGSFNNYSDDSISIGAFHAMKKGIITVTSAGNSGPTAGSVVNHAPWIVTVAASAIDRKFISPLELGNGKNISGVGINIFNPKQKMYPLVSGGDVARNSESKDSASYCEEDSLDPAKVKGSLVFCKLMTWGADSVIKSLGANGVIIQSDHFLDNADIFMAPATMVSSSVGATIHTYIKSTRTPTAVIYKTRQLKATAPVVGSFSSRGPNPGSNRILKPDIAAPGVDILAGYTPLKSLTGLKGDTQFSKFTLMSGTSMACPHVAAAAAYVKSFHPLWSPAAIRSALLTTARPISRRLNPDGEFAFGAGNLNPSRAISPGLIYDLNEMSYIQFLCREGYTGSSIAVLAGTKTINCSTLIPGQGHDALNYPTFQLSLKSTQRPTTTTFRRRVTNVAHPVSVYNATIKAPPGVEITVTPTTLSFSRLLQKKSFKVVVKASPLPSGKMVSGSLAWIGVRHVVRSPIVVYSP 746
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 13051037 13061199 + CcPI632755_07g007110.1 Cco07g0711 183364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco07g0711 746 Pfam Subtilase family 136 585 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cco07g0711 746 ProSitePatterns Serine proteases, subtilase family, serine active site. 534 544 IPR023828 -
Cco07g0711 746 CDD PA_subtilisin_like 344 467 - -
Cco07g0711 746 CDD Peptidases_S8_3 112 569 IPR034197 -
Cco07g0711 746 PRINTS Subtilisin serine protease family (S8) signature 205 218 IPR015500 -
Cco07g0711 746 PRINTS Subtilisin serine protease family (S8) signature 533 549 IPR015500 -
Cco07g0711 746 PRINTS Subtilisin serine protease family (S8) signature 135 154 IPR015500 -
Cco07g0711 746 Pfam Peptidase inhibitor I9 37 114 IPR010259 -
Cco07g0711 746 Gene3D - 337 473 - -
Cco07g0711 746 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 61 741 IPR045051 -
Cco07g0711 746 ProSiteProfiles Serine proteases, subtilase domain profile. 118 595 - -
Cco07g0711 746 Gene3D Peptidase S8/S53 domain 137 608 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cco07g0711 746 FunFam Subtilisin-like protease SBT1.5 137 349 - -
Cco07g0711 746 Gene3D - 612 745 - -
Cco07g0711 746 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 114 IPR037045 -
Cco07g0711 746 Pfam Fibronectin type-III domain 645 743 IPR041469 -
Cco07g0711 746 SUPERFAMILY Subtilisin-like 120 595 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco04g1202 Cco-Chr4:27448513 Cco07g0711 Cco-Chr7:13051037 2.50E-190 dispersed
Cco07g0368 Cco-Chr7:4006329 Cco07g0711 Cco-Chr7:13051037 1.30E-176 dispersed
Cco07g0369 Cco-Chr7:4020777 Cco07g0711 Cco-Chr7:13051037 3.60E-192 dispersed
Cco07g0711 Cco-Chr7:13051037 Cco10g1903 Cco-Chr10:32583886 2.40E-143 dispersed
Cco07g0709 Cco-Chr7:12792063 Cco07g0711 Cco-Chr7:13051037 0.00E+00 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco07g0711 - - - 0.0