Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco07g0867 ATGTCATTCAGATCCAAAAGCTTCCTTCATGTGTTGTCTCGATCCGAGAGCTTCGTTCACGCTCGTCCAGATCTGAGTTCGTTCCATCCAGATTTGAGTACTAGTGTGATGTATAGGAGATGCTTTCTTCTTGCTCTCTTCTTCTATGCCTCAATCTTTGAGAAACTGACTGTAAAACCAGAGGCAAGTGGCAAGCTTCTTCATATCGTACACCTCGAACATAACCAACATGATCCCAACTCCAGCATCGTCGAGATTCATCATAATTTCTTGTCTACTCTGCTGGGAAGTAAAAAGAAGGCTTCGAAATCCATGGTGTACAGTTATACACATGCCTTTTCTGGGTTTGCTGCAAAGCTCACAAAATCTCAAGCTTATCAGCTTTCTGAAATGCGTGGTGTGGTTCGAGTTCTTCCAAGTGTTCTTTACGATCTCCATACAACTAGAAGCTGGGATTTTCTCGGCCTTTCTCCTTCTCCATCTCCCTCAAATCTTCTGCAGATGAGTAATTTGGGTGACGGAATAATCATTGGGGTAGTGGATACGGGAATTTGGCCGGAAACGGAGGCGTTCGACGATCAAGGATTGGGGCCTGTGCCAGTTCGGTGGAAAGGCGAGTGCAAATCAGGGGAACAATTCAAAGCGACGAGAGATTGCAATAGAAAAATCATAGGAGCCAAATGGTACGTTGATGGGTTCATAGCCGAATTTGGGGAATTCAACAGATCAGCAGTGAAGGAATTCATGTCTCCAAGAGATTCAAACGGACATGGTACTCAAACGGCGAGCACCGCCGCCGGTTCGTTCGTGAAAAATGTCAGTTACAGAGGCCTCGGCGGTGGGACTGCAAGGGGCGGCGCACCAGCAGCGCGGTTGGCAGTGTACAAGGCATGTTGGAGCTTGCCCGGTGGCGGTGGCCAGTGCTCGGCGGCGGACGTATTGAAGGGAATGGACGACGCCGTACACGACGGCGTTGATGTATTGTCTCTATCTTTGGGGAAGAGTGCTCCTCTGTTTGCGGAGGTGGATGAAGAGAACGTGGTTGCGATTGGGTCATTCCGGGCAAACATGAGGAATATTTCTGTGGTCTGTTCCGCCGGTAACGACGGGCCTTCTGCAGAGACGGTGATCAACACTTCCCCTTGGATCTTGAGTGTTGCTGCAACTTCTATTGACAGAACTTTTTTGGGCTCTATTACTCTTGGAAATAACAACACTTTTCTGAGTCAAACCCTATACACTAGAAAGGAGATTGGATATAGTGGCTTGGTATATCCAAGGTCTGGGTTGAACCAGATCATCGCAGGGTTATGTGATTCAATAACATTAGTGAATGGTAGTAATTGGATGAGTGGAAAAGTGGTTCTCTGCTTCAGCACAATGGTGGGGATGAATCCAATAGCCATAACAAGAGCTGTGGAAGCTGTGAAAGCAGGAAATGGCTTGGGGTTAATTGTTGCTAGGCATCCTGATGATATCTGGTTTACATGTGACAATGATTTCCCTTGTTTTCAAGTCAATTTTGAAGTTGGCACCAAAATCTTCTATTACATCCGGGCAACAAGTTCTCCAATGGTAAAGCTGAGCCCTTCAAGGACCATCACAGGCAACCCCATTTCAGCACATATAGCATACTTCTCATCAAGAGGTCCCAATTCTGTTGCACCAGCAATTCTGAAGCCAGATATTGGTGCTCCAGGTGTGGCAATATTAGTAGCCACTTCCCCATTTGACATAACAAATGATGGAGGTTTTACCATACAAACAGGAACTTCCATAGCAACCCCTCACATTTCAGCCATTGTGGCTCTTCTCAAGTCACTTCATCCTACTTGGTCTCCTGCTGCCATCAAATCTGCCATTATCACAACTGCATGGAGCAGGCATCCTTCTGGGGTACCAATTCTTGCTGAAGGATCTCCACATAAACTTGGAAATCCATTTGACTATGGAGGAGGAATTGTTAACCCAAATGCAGCTGCAAACCCAGGCCTCATTTACGACATGTCGACTTCCGATTACATCTCTTACTTTTGCTCAATGGGCTACAAAAACTCTGCCATATCTTTTCTAACAGAGCAAAAAACAGAGTGCCCATCAAAACCCCAAATTTCTTTGTTGGATCTTAATCTACCTTCCATAACAGTCCCAGCACTTACAAACTCAATCACTATCACTCGAACTGTCACTAATGTTGGTAATTTGACCTCCATTTACAAAGCTTTGATTCACCCTCCAATGGGAATCAATGTCACTGTGGACCCTCTTGTCTTACTCTTCAATGCTACTGTCACCAATTTGTCCTTCAAGGTTATGATTTCAACCCTTTTAGAGATGGATTATGGTTTTTCTTTCGGAGCTATCATTTGGAGTGATGGAGTGCATCTTGTTACAACTCCATTGTCAGTTAGAACTCAAATTCTACATTCTTCTACGTAG 2439 45.18 MSFRSKSFLHVLSRSESFVHARPDLSSFHPDLSTSVMYRRCFLLALFFYASIFEKLTVKPEASGKLLHIVHLEHNQHDPNSSIVEIHHNFLSTLLGSKKKASKSMVYSYTHAFSGFAAKLTKSQAYQLSEMRGVVRVLPSVLYDLHTTRSWDFLGLSPSPSPSNLLQMSNLGDGIIIGVVDTGIWPETEAFDDQGLGPVPVRWKGECKSGEQFKATRDCNRKIIGAKWYVDGFIAEFGEFNRSAVKEFMSPRDSNGHGTQTASTAAGSFVKNVSYRGLGGGTARGGAPAARLAVYKACWSLPGGGGQCSAADVLKGMDDAVHDGVDVLSLSLGKSAPLFAEVDEENVVAIGSFRANMRNISVVCSAGNDGPSAETVINTSPWILSVAATSIDRTFLGSITLGNNNTFLSQTLYTRKEIGYSGLVYPRSGLNQIIAGLCDSITLVNGSNWMSGKVVLCFSTMVGMNPIAITRAVEAVKAGNGLGLIVARHPDDIWFTCDNDFPCFQVNFEVGTKIFYYIRATSSPMVKLSPSRTITGNPISAHIAYFSSRGPNSVAPAILKPDIGAPGVAILVATSPFDITNDGGFTIQTGTSIATPHISAIVALLKSLHPTWSPAAIKSAIITTAWSRHPSGVPILAEGSPHKLGNPFDYGGGIVNPNAAANPGLIYDMSTSDYISYFCSMGYKNSAISFLTEQKTECPSKPQISLLDLNLPSITVPALTNSITITRTVTNVGNLTSIYKALIHPPMGINVTVDPLVLLFNATVTNLSFKVMISTLLEMDYGFSFGAIIWSDGVHLVTTPLSVRTQILHSST 812
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 20116718 20123946 + CcPI632755_07g008670.1 Cco07g0867 183520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco07g0867 812 CDD Peptidases_S8_3 143 626 IPR034197 -
Cco07g0867 812 FunFam Subtilisin-like protease SBT5.3 57 146 - -
Cco07g0867 812 ProSitePatterns Serine proteases, subtilase family, serine active site. 590 600 IPR023828 -
Cco07g0867 812 PRINTS Subtilisin serine protease family (S8) signature 589 605 IPR015500 -
Cco07g0867 812 PRINTS Subtilisin serine protease family (S8) signature 253 266 IPR015500 -
Cco07g0867 812 PRINTS Subtilisin serine protease family (S8) signature 172 191 IPR015500 -
Cco07g0867 812 Pfam Peptidase inhibitor I9 68 146 IPR010259 -
Cco07g0867 812 SUPERFAMILY Subtilisin-like 39 732 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cco07g0867 812 Gene3D - 678 806 - -
Cco07g0867 812 ProSiteProfiles Serine proteases, subtilase domain profile. 150 661 - -
Cco07g0867 812 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 53 146 IPR037045 -
Cco07g0867 812 Pfam Subtilase family 172 630 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cco07g0867 812 Gene3D - 392 535 - -
Cco07g0867 812 CDD PA_subtilisin_like 398 528 - -
Cco07g0867 812 Gene3D Peptidase S8/S53 domain 174 674 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cco07g0867 812 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 68 800 IPR045051 -
Cco07g0867 812 FunFam Subtilisin-like protease SBT1.5 174 401 - -
Cco07g0867 812 FunFam Subtilisin-like protease SBT1.5 678 806 - -
Cco07g0867 812 Pfam Fibronectin type-III domain 708 803 IPR041469 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco01g1380 Cco-Chr1:24653082 Cco07g0867 Cco-Chr7:20116718 1.20E-158 dispersed
Cco07g0867 Cco-Chr7:20116718 Cco10g0393 Cco-Chr10:4601647 2.90E-134 dispersed
Cco07g0867 Cco-Chr7:20116718 Cco09g0103 Cco-Chr9:902807 4.40E-135 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco07g0867 - - - 0.0