Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco07g0944 | ATGGCTCAATCTCGGAGCTTACTCTTTGCATTTGCTCTTCTTGCCTTGGCTTCGGTTGCTTTCTCTCACAAGATCGGCGGCGGCGGCGGCTATTATTTGTATCCTCAATTCTATGACCATTCTTGTCCGAGAGCTCAAGAGATAGTGAAGTCCATAGTGGCTAAGGCTTTTGCAAAGGAAGCTCGTATTGCTGCTTCCTTGCTTAGGCTTCATTTCCATGATTGTTTTGTTAAGGGCTGTGATGCTTCACTGTTGTTAGATAGCAGTGGGAAAATAGCCAGTGAGAAAAGGTCAAATCCAAACAGAAACTCTGCTAGAGGCTTTGAAGTCATTGATGAGATCAAATCTGCCTTGGAAAAGGAGTGTCCTCAAACTGTTTCTTGTGCTGATATTTTGGCCATTGCTGCTAGAGACTCCACAGTCATAACTGGAGGACCCAGTTGGGAAGTTCCACTTGGAAGAAGGGACTCAAGAGGAGCAAGTCTAAGTGGCTCTAACAATGACATTCCTGCTCCAAACAACACTTTCCAAACCATTCTCACCAAGTTCAAAAGACAAGGCCTTGATATTGTTGATCTTGTTGCTCTTTCAGGAAGCCACACCATTGGAAATTCCCGATGCACCAGCTTCAGGCAACGTCTCTACAACCAATCTGGCAATTCCCAGCCCGATCCCTCCCTCGATCCATCATACGCCGCTGAATTGCGCAAGGGATGCCCGAGATCAGGGGGTGACCAGAACCTGTTTTTCCTGGACTTTGTGAGCCCTACCAAGTTCGACAACTACTACTTTAAGAATCTTTTGGCTGCAAAGGGTCTGCTGAACTCAGATCAAGTTCTTTTGACAAAGAACTTGCAATCAGCGGAATTGGTGAGGACATATGCAGAGAATTCTGATATCTTTTTTGAGCAATTTGCTAAGTCCATGGTTAAGATGGGAAACATTTCTCCTCTCACTGGTTCAAGGGGAGAGATCAGAAAGCACTGCAGAAAAGTTAACAATAATTAG | 1008 | 45.04 | MAQSRSLLFAFALLALASVAFSHKIGGGGGYYLYPQFYDHSCPRAQEIVKSIVAKAFAKEARIAASLLRLHFHDCFVKGCDASLLLDSSGKIASEKRSNPNRNSARGFEVIDEIKSALEKECPQTVSCADILAIAARDSTVITGGPSWEVPLGRRDSRGASLSGSNNDIPAPNNTFQTILTKFKRQGLDIVDLVALSGSHTIGNSRCTSFRQRLYNQSGNSQPDPSLDPSYAAELRKGCPRSGGDQNLFFLDFVSPTKFDNYYFKNLLAAKGLLNSDQVLLTKNLQSAELVRTYAENSDIFFEQFAKSMVKMGNISPLTGSRGEIRKHCRKVNNN | 335 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 21624347 | 21626413 | + | CcPI632755_07g009440.1 | Cco07g0944 | 183597 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco07g0944 | 335 | PANTHER | PEROXIDASE 72-RELATED | 11 | 332 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Cco07g0944 | 335 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 192 | 202 | IPR019793 | - | |
Cco07g0944 | 335 | ProSiteProfiles | Plant heme peroxidase family profile. | 32 | 333 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Cco07g0944 | 335 | PRINTS | Haem peroxidase superfamily signature | 252 | 267 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Cco07g0944 | 335 | PRINTS | Haem peroxidase superfamily signature | 64 | 78 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Cco07g0944 | 335 | PRINTS | Haem peroxidase superfamily signature | 144 | 156 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Cco07g0944 | 335 | PRINTS | Haem peroxidase superfamily signature | 126 | 143 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Cco07g0944 | 335 | PRINTS | Haem peroxidase superfamily signature | 192 | 207 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Cco07g0944 | 335 | FunFam | Peroxidase | 170 | 312 | - | - | |
Cco07g0944 | 335 | Gene3D | - | 37 | 333 | - | - | |
Cco07g0944 | 335 | SUPERFAMILY | Heme-dependent peroxidases | 33 | 333 | IPR010255 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Cco07g0944 | 335 | PRINTS | Plant peroxidase signature | 125 | 135 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Cco07g0944 | 335 | PRINTS | Plant peroxidase signature | 307 | 320 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Cco07g0944 | 335 | PRINTS | Plant peroxidase signature | 266 | 283 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Cco07g0944 | 335 | PRINTS | Plant peroxidase signature | 42 | 61 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Cco07g0944 | 335 | PRINTS | Plant peroxidase signature | 144 | 159 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Cco07g0944 | 335 | PRINTS | Plant peroxidase signature | 106 | 119 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Cco07g0944 | 335 | PRINTS | Plant peroxidase signature | 250 | 265 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Cco07g0944 | 335 | PRINTS | Plant peroxidase signature | 191 | 203 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Cco07g0944 | 335 | PRINTS | Plant peroxidase signature | 66 | 86 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Cco07g0944 | 335 | Pfam | Peroxidase | 49 | 297 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Cco07g0944 | 335 | Gene3D | Peroxidase, domain 2 | 170 | 313 | - | - | |
Cco07g0944 | 335 | CDD | secretory_peroxidase | 33 | 332 | IPR033905 | GO:0004601(InterPro)|GO:0042744(InterPro) | |
Cco07g0944 | 335 | FunFam | Peroxidase | 36 | 178 | - | - | |
Cco07g0944 | 335 | ProSitePatterns | Peroxidases active site signature. | 64 | 75 | IPR019794 | GO:0004601(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco04g1088 | Cco-Chr4:26329248 | Cco07g0944 | Cco-Chr7:21624347 | 9.30E-52 | dispersed | |
Cco07g0944 | Cco-Chr7:21624347 | Cco11g0594 | Cco-Chr11:6349590 | 2.40E-87 | dispersed | |
Cco11g0729 | Cco-Chr11:8032282 | Cco07g0944 | Cco-Chr7:21624347 | 3.30E-59 | dispersed | |
Cco11g0730 | Cco-Chr11:8065039 | Cco07g0944 | Cco-Chr7:21624347 | 1.40E-60 | dispersed | |
Cco06g0445 | Cco-Chr6:4898251 | Cco07g0944 | Cco-Chr7:21624347 | 2.70E-82 | transposed | |
Cco07g1807 | Cco-Chr7:32197567 | Cco07g0944 | Cco-Chr7:21624347 | 2.80E-80 | transposed | |
Cco09g1278 | Cco-Chr9:13885720 | Cco07g0944 | Cco-Chr7:21624347 | 6.20E-89 | transposed | |
Cco09g2469 | Cco-Chr9:38879791 | Cco07g0944 | Cco-Chr7:21624347 | 3.20E-59 | transposed | |
Cco04g1755 | Cco-Chr4:32544783 | Cco07g0944 | Cco-Chr7:21624347 | 5.20E-151 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco07g0944 | K00430 | - | csv:101223204 | 608.986 |