Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco07g0944 ATGGCTCAATCTCGGAGCTTACTCTTTGCATTTGCTCTTCTTGCCTTGGCTTCGGTTGCTTTCTCTCACAAGATCGGCGGCGGCGGCGGCTATTATTTGTATCCTCAATTCTATGACCATTCTTGTCCGAGAGCTCAAGAGATAGTGAAGTCCATAGTGGCTAAGGCTTTTGCAAAGGAAGCTCGTATTGCTGCTTCCTTGCTTAGGCTTCATTTCCATGATTGTTTTGTTAAGGGCTGTGATGCTTCACTGTTGTTAGATAGCAGTGGGAAAATAGCCAGTGAGAAAAGGTCAAATCCAAACAGAAACTCTGCTAGAGGCTTTGAAGTCATTGATGAGATCAAATCTGCCTTGGAAAAGGAGTGTCCTCAAACTGTTTCTTGTGCTGATATTTTGGCCATTGCTGCTAGAGACTCCACAGTCATAACTGGAGGACCCAGTTGGGAAGTTCCACTTGGAAGAAGGGACTCAAGAGGAGCAAGTCTAAGTGGCTCTAACAATGACATTCCTGCTCCAAACAACACTTTCCAAACCATTCTCACCAAGTTCAAAAGACAAGGCCTTGATATTGTTGATCTTGTTGCTCTTTCAGGAAGCCACACCATTGGAAATTCCCGATGCACCAGCTTCAGGCAACGTCTCTACAACCAATCTGGCAATTCCCAGCCCGATCCCTCCCTCGATCCATCATACGCCGCTGAATTGCGCAAGGGATGCCCGAGATCAGGGGGTGACCAGAACCTGTTTTTCCTGGACTTTGTGAGCCCTACCAAGTTCGACAACTACTACTTTAAGAATCTTTTGGCTGCAAAGGGTCTGCTGAACTCAGATCAAGTTCTTTTGACAAAGAACTTGCAATCAGCGGAATTGGTGAGGACATATGCAGAGAATTCTGATATCTTTTTTGAGCAATTTGCTAAGTCCATGGTTAAGATGGGAAACATTTCTCCTCTCACTGGTTCAAGGGGAGAGATCAGAAAGCACTGCAGAAAAGTTAACAATAATTAG 1008 45.04 MAQSRSLLFAFALLALASVAFSHKIGGGGGYYLYPQFYDHSCPRAQEIVKSIVAKAFAKEARIAASLLRLHFHDCFVKGCDASLLLDSSGKIASEKRSNPNRNSARGFEVIDEIKSALEKECPQTVSCADILAIAARDSTVITGGPSWEVPLGRRDSRGASLSGSNNDIPAPNNTFQTILTKFKRQGLDIVDLVALSGSHTIGNSRCTSFRQRLYNQSGNSQPDPSLDPSYAAELRKGCPRSGGDQNLFFLDFVSPTKFDNYYFKNLLAAKGLLNSDQVLLTKNLQSAELVRTYAENSDIFFEQFAKSMVKMGNISPLTGSRGEIRKHCRKVNNN 335
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 21624347 21626413 + CcPI632755_07g009440.1 Cco07g0944 183597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco07g0944 335 PANTHER PEROXIDASE 72-RELATED 11 332 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco07g0944 335 ProSitePatterns Peroxidases proximal heme-ligand signature. 192 202 IPR019793 -
Cco07g0944 335 ProSiteProfiles Plant heme peroxidase family profile. 32 333 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco07g0944 335 PRINTS Haem peroxidase superfamily signature 252 267 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco07g0944 335 PRINTS Haem peroxidase superfamily signature 64 78 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco07g0944 335 PRINTS Haem peroxidase superfamily signature 144 156 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco07g0944 335 PRINTS Haem peroxidase superfamily signature 126 143 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco07g0944 335 PRINTS Haem peroxidase superfamily signature 192 207 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco07g0944 335 FunFam Peroxidase 170 312 - -
Cco07g0944 335 Gene3D - 37 333 - -
Cco07g0944 335 SUPERFAMILY Heme-dependent peroxidases 33 333 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco07g0944 335 PRINTS Plant peroxidase signature 125 135 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco07g0944 335 PRINTS Plant peroxidase signature 307 320 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco07g0944 335 PRINTS Plant peroxidase signature 266 283 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco07g0944 335 PRINTS Plant peroxidase signature 42 61 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco07g0944 335 PRINTS Plant peroxidase signature 144 159 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco07g0944 335 PRINTS Plant peroxidase signature 106 119 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco07g0944 335 PRINTS Plant peroxidase signature 250 265 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco07g0944 335 PRINTS Plant peroxidase signature 191 203 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco07g0944 335 PRINTS Plant peroxidase signature 66 86 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco07g0944 335 Pfam Peroxidase 49 297 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco07g0944 335 Gene3D Peroxidase, domain 2 170 313 - -
Cco07g0944 335 CDD secretory_peroxidase 33 332 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cco07g0944 335 FunFam Peroxidase 36 178 - -
Cco07g0944 335 ProSitePatterns Peroxidases active site signature. 64 75 IPR019794 GO:0004601(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco04g1088 Cco-Chr4:26329248 Cco07g0944 Cco-Chr7:21624347 9.30E-52 dispersed
Cco07g0944 Cco-Chr7:21624347 Cco11g0594 Cco-Chr11:6349590 2.40E-87 dispersed
Cco11g0729 Cco-Chr11:8032282 Cco07g0944 Cco-Chr7:21624347 3.30E-59 dispersed
Cco11g0730 Cco-Chr11:8065039 Cco07g0944 Cco-Chr7:21624347 1.40E-60 dispersed
Cco06g0445 Cco-Chr6:4898251 Cco07g0944 Cco-Chr7:21624347 2.70E-82 transposed
Cco07g1807 Cco-Chr7:32197567 Cco07g0944 Cco-Chr7:21624347 2.80E-80 transposed
Cco09g1278 Cco-Chr9:13885720 Cco07g0944 Cco-Chr7:21624347 6.20E-89 transposed
Cco09g2469 Cco-Chr9:38879791 Cco07g0944 Cco-Chr7:21624347 3.20E-59 transposed
Cco04g1755 Cco-Chr4:32544783 Cco07g0944 Cco-Chr7:21624347 5.20E-151 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco07g0944 K00430 - csv:101223204 608.986