Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cco07g0958 ATGCCAGAAAGGATGGCCATAAAGGAAAAAGCCTATCCCACCTACCTCAAAGGTCATCATTTGAAGCTTTGCAAGCCACCAACACCAGAAAGCAATTTTGGACCAGATGCAGATGTCAGTGAGGTCGTCCCGAAACGTTTGGTTGCGAGTGGGATGACTCTCGGGATCATGGCGAAAGGATCTCTGCGAATGAGAACTTATAGGTATATGTTCCTAACCGACTTTGTAACCAACCTTTGCTACCTAAAAATCTATCAATTACAATCAAGTAATTCTGGAAAGCCAAGGCTTTGCTCCTTCTTCTCACTTCTGTTCTCCGGCCGCTGCCACTCCCTCCGGGGCCTGCTACCCATCATCGGCAATATGCGGATGATAGACCAACTCACCCACCGTGGACTTGCCGCCATGGCCAAACGGTATGGCGGAATCTTCCACCTCCGCATCGGCTCCCTCCACATGGTTGCCATTTCCGACCCCGATGTTGCTCGAAATGTTCTTCAGGTACAAGATCTGGTGTTTTCAAATCGTCCAGCAACCAAAGCCATAAAGTACTTAACATACAACCGCAAGCGAGCCGAGTCATGGGCATCGGTTCGACATGAGGTTCATAATCTCATCACCACAATTGCCAACAACACACAAACCCCTCTCAACCTTGGCCACTTAATCTTCACAATGAGCATTAATATAATTTACAGGGCTGCCTTTGGGACAATCGAACCACAACACCAATCCCAATTCATCAAAATACTGGAAGAATTCTCCAAGCTTTTTGGAGCTTTCAATGTTGCTGATTTTTTCCCTTGTCTTGCCTGGATTGATCCTCAAGGTCTCACTCCTAGACTTGTCGAGGCTCGTCGATCTCTCGACTGTGAAGATGGCGGAGGAAATAACGAAAGTGAGTTAGAGGATTTGCAATTGCAAAATGCTATCAAACTCACTAGGGACAATATCAAAGCCATCATAATGGACGTAATGTTTGGCGGCACAGAAACAGTTGCCTCCGCCATAGAATGGGCCATGGCGGAGCTCATGAAGAACCCCGATGACCTCAACAAACTTCAACAAGAACTCACCGCTACCTTCGGACTTCACCGGTGTCCACAAGAATCCAACTTAGAGAATCTAACATACCTAAAATGCATTCTCAAGGAAACTCTCCGGCTCCACCCACCCATTCCGCTACTCCTCCACGAGACGGCCGCCGAAACGGAACTCGCCGGCTACCGGATTCCTGCGAAGTCCGGCGTCTTCATCAACGCATGGGCACTCGGGCGGGACGAGAAGTCGTGGGTGGACCCAAACAGTTTCCGGCCGGCGAGGTTCGAAAGCAACGGCGCCGCCGACTTCAAAGGCGGGAACTTTGAGTTCATTCCATTCGGGTCGGGCCGTCGGTCTTGCCCCGGAATGCAGCTGGGGATTTACACGGTGGAGATGGCGGTAGCGAATTTGGTACATTGTTTCCGGTGGGAGTTGCCGGAGGGGATGAAGCCCGGGGAGTTGGATATGAATGACGTTTTTGGACTCACTGCGCCCAGAGCGACTCGACTCGTGGCTATTCCGTACAAGAGAGTTGTTTGTAGTTTGGACTGA 1593 50.16 MPERMAIKEKAYPTYLKGHHLKLCKPPTPESNFGPDADVSEVVPKRLVASGMTLGIMAKGSLRMRTYRYMFLTDFVTNLCYLKIYQLQSSNSGKPRLCSFFSLLFSGRCHSLRGLLPIIGNMRMIDQLTHRGLAAMAKRYGGIFHLRIGSLHMVAISDPDVARNVLQVQDLVFSNRPATKAIKYLTYNRKRAESWASVRHEVHNLITTIANNTQTPLNLGHLIFTMSINIIYRAAFGTIEPQHQSQFIKILEEFSKLFGAFNVADFFPCLAWIDPQGLTPRLVEARRSLDCEDGGGNNESELEDLQLQNAIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKNPDDLNKLQQELTATFGLHRCPQESNLENLTYLKCILKETLRLHPPIPLLLHETAAETELAGYRIPAKSGVFINAWALGRDEKSWVDPNSFRPARFESNGAADFKGGNFEFIPFGSGRRSCPGMQLGIYTVEMAVANLVHCFRWELPEGMKPGELDMNDVFGLTAPRATRLVAIPYKRVVCSLD 530
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 22075655 22081717 - CcPI632755_07g009580.1 Cco07g0958 183611
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cco07g0958 530 Pfam Cytochrome P450 193 512 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco07g0958 530 Pfam Cytochrome P450 115 189 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco07g0958 530 PANTHER CYTOCHROME P450 84A1-RELATED 300 529 IPR053062 GO:0004497(PANTHER)
Cco07g0958 530 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 460 469 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cco07g0958 530 SUPERFAMILY Cytochrome P450 115 524 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco07g0958 530 PRINTS P450 superfamily signature 458 467 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco07g0958 530 PRINTS P450 superfamily signature 328 345 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco07g0958 530 PRINTS P450 superfamily signature 381 392 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco07g0958 530 PRINTS E-class P450 group I signature 161 182 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco07g0958 530 PRINTS E-class P450 group I signature 457 467 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco07g0958 530 PRINTS E-class P450 group I signature 380 398 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco07g0958 530 PRINTS E-class P450 group I signature 467 490 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco07g0958 530 PRINTS E-class P450 group I signature 137 156 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco07g0958 530 PRINTS E-class P450 group I signature 420 444 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco07g0958 530 Gene3D Cytochrome P450 110 524 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco07g0958 530 FunFam Predicted protein 326 519 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco02g0504 Cco-Chr2:4689928 Cco07g0958 Cco-Chr7:22075655 1.40E-60 dispersed
Cco04g1773 Cco-Chr4:32677857 Cco07g0958 Cco-Chr7:22075655 4.60E-154 dispersed
Cco07g0958 Cco-Chr7:22075655 Cco11g0030 Cco-Chr11:380718 3.00E-76 dispersed
Cco07g0958 Cco-Chr7:22075655 Cco06g1946 Cco-Chr6:29687952 3.20E-70 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco07g0958 K09755 - vvi:100267863 555.829