Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cco07g0958 | ATGCCAGAAAGGATGGCCATAAAGGAAAAAGCCTATCCCACCTACCTCAAAGGTCATCATTTGAAGCTTTGCAAGCCACCAACACCAGAAAGCAATTTTGGACCAGATGCAGATGTCAGTGAGGTCGTCCCGAAACGTTTGGTTGCGAGTGGGATGACTCTCGGGATCATGGCGAAAGGATCTCTGCGAATGAGAACTTATAGGTATATGTTCCTAACCGACTTTGTAACCAACCTTTGCTACCTAAAAATCTATCAATTACAATCAAGTAATTCTGGAAAGCCAAGGCTTTGCTCCTTCTTCTCACTTCTGTTCTCCGGCCGCTGCCACTCCCTCCGGGGCCTGCTACCCATCATCGGCAATATGCGGATGATAGACCAACTCACCCACCGTGGACTTGCCGCCATGGCCAAACGGTATGGCGGAATCTTCCACCTCCGCATCGGCTCCCTCCACATGGTTGCCATTTCCGACCCCGATGTTGCTCGAAATGTTCTTCAGGTACAAGATCTGGTGTTTTCAAATCGTCCAGCAACCAAAGCCATAAAGTACTTAACATACAACCGCAAGCGAGCCGAGTCATGGGCATCGGTTCGACATGAGGTTCATAATCTCATCACCACAATTGCCAACAACACACAAACCCCTCTCAACCTTGGCCACTTAATCTTCACAATGAGCATTAATATAATTTACAGGGCTGCCTTTGGGACAATCGAACCACAACACCAATCCCAATTCATCAAAATACTGGAAGAATTCTCCAAGCTTTTTGGAGCTTTCAATGTTGCTGATTTTTTCCCTTGTCTTGCCTGGATTGATCCTCAAGGTCTCACTCCTAGACTTGTCGAGGCTCGTCGATCTCTCGACTGTGAAGATGGCGGAGGAAATAACGAAAGTGAGTTAGAGGATTTGCAATTGCAAAATGCTATCAAACTCACTAGGGACAATATCAAAGCCATCATAATGGACGTAATGTTTGGCGGCACAGAAACAGTTGCCTCCGCCATAGAATGGGCCATGGCGGAGCTCATGAAGAACCCCGATGACCTCAACAAACTTCAACAAGAACTCACCGCTACCTTCGGACTTCACCGGTGTCCACAAGAATCCAACTTAGAGAATCTAACATACCTAAAATGCATTCTCAAGGAAACTCTCCGGCTCCACCCACCCATTCCGCTACTCCTCCACGAGACGGCCGCCGAAACGGAACTCGCCGGCTACCGGATTCCTGCGAAGTCCGGCGTCTTCATCAACGCATGGGCACTCGGGCGGGACGAGAAGTCGTGGGTGGACCCAAACAGTTTCCGGCCGGCGAGGTTCGAAAGCAACGGCGCCGCCGACTTCAAAGGCGGGAACTTTGAGTTCATTCCATTCGGGTCGGGCCGTCGGTCTTGCCCCGGAATGCAGCTGGGGATTTACACGGTGGAGATGGCGGTAGCGAATTTGGTACATTGTTTCCGGTGGGAGTTGCCGGAGGGGATGAAGCCCGGGGAGTTGGATATGAATGACGTTTTTGGACTCACTGCGCCCAGAGCGACTCGACTCGTGGCTATTCCGTACAAGAGAGTTGTTTGTAGTTTGGACTGA | 1593 | 50.16 | MPERMAIKEKAYPTYLKGHHLKLCKPPTPESNFGPDADVSEVVPKRLVASGMTLGIMAKGSLRMRTYRYMFLTDFVTNLCYLKIYQLQSSNSGKPRLCSFFSLLFSGRCHSLRGLLPIIGNMRMIDQLTHRGLAAMAKRYGGIFHLRIGSLHMVAISDPDVARNVLQVQDLVFSNRPATKAIKYLTYNRKRAESWASVRHEVHNLITTIANNTQTPLNLGHLIFTMSINIIYRAAFGTIEPQHQSQFIKILEEFSKLFGAFNVADFFPCLAWIDPQGLTPRLVEARRSLDCEDGGGNNESELEDLQLQNAIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKNPDDLNKLQQELTATFGLHRCPQESNLENLTYLKCILKETLRLHPPIPLLLHETAAETELAGYRIPAKSGVFINAWALGRDEKSWVDPNSFRPARFESNGAADFKGGNFEFIPFGSGRRSCPGMQLGIYTVEMAVANLVHCFRWELPEGMKPGELDMNDVFGLTAPRATRLVAIPYKRVVCSLD | 530 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 22075655 | 22081717 | - | CcPI632755_07g009580.1 | Cco07g0958 | 183611 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cco07g0958 | 530 | Pfam | Cytochrome P450 | 193 | 512 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco07g0958 | 530 | Pfam | Cytochrome P450 | 115 | 189 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco07g0958 | 530 | PANTHER | CYTOCHROME P450 84A1-RELATED | 300 | 529 | IPR053062 | GO:0004497(PANTHER) | |
| Cco07g0958 | 530 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 460 | 469 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cco07g0958 | 530 | SUPERFAMILY | Cytochrome P450 | 115 | 524 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco07g0958 | 530 | PRINTS | P450 superfamily signature | 458 | 467 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco07g0958 | 530 | PRINTS | P450 superfamily signature | 328 | 345 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco07g0958 | 530 | PRINTS | P450 superfamily signature | 381 | 392 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco07g0958 | 530 | PRINTS | E-class P450 group I signature | 161 | 182 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco07g0958 | 530 | PRINTS | E-class P450 group I signature | 457 | 467 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco07g0958 | 530 | PRINTS | E-class P450 group I signature | 380 | 398 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco07g0958 | 530 | PRINTS | E-class P450 group I signature | 467 | 490 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco07g0958 | 530 | PRINTS | E-class P450 group I signature | 137 | 156 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco07g0958 | 530 | PRINTS | E-class P450 group I signature | 420 | 444 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco07g0958 | 530 | Gene3D | Cytochrome P450 | 110 | 524 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco07g0958 | 530 | FunFam | Predicted protein | 326 | 519 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cco02g0504 | Cco-Chr2:4689928 | Cco07g0958 | Cco-Chr7:22075655 | 1.40E-60 | dispersed | |
| Cco04g1773 | Cco-Chr4:32677857 | Cco07g0958 | Cco-Chr7:22075655 | 4.60E-154 | dispersed | |
| Cco07g0958 | Cco-Chr7:22075655 | Cco11g0030 | Cco-Chr11:380718 | 3.00E-76 | dispersed | |
| Cco07g0958 | Cco-Chr7:22075655 | Cco06g1946 | Cco-Chr6:29687952 | 3.20E-70 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cco07g0958 | K09755 | - | vvi:100267863 | 555.829 |