Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco07g0963 ATGCAAAAGAAAGAAAAAGAAACCCCACACCAAAAAGATCAGATCAAAACAAGTTTTTCCAAGACAAAGATGGAAGCCAATTTGGAGGTGCTGAGGGAAAGCTTCAAAAATGGAAGAACAAGGAGTTTCGAATGGAGGAAAAACCAGCTGAGTTCTCTGATTCAGTTCATCCATGACAAAGAAAACGTCATTTTTGAAGCCCTCTATCAAGATCTTGGCAAGCATCCTGTGGAAATTTTTCGAGATGAGGTTGGAATTGTTCTGAAATCTGCAAACAATGCTCTCTGCTCTTTACACAAATGGATGGCCCCTAAAAAGAAATCTGTGCCATTACTATTCTTCCCAGCAAAAGGAGAAGTTTTGTCTGAGCCATTTGGTCTGGTTCTCATAATTTCATCTTGGAATTTCCCCCTTTCTTTGGCATTGGATCCGTTAATTGGAGCGATATCAGCGGGCAACACGGCGGTTATAAAACCATCGGAATATAATCCTGTTTTCTCCTCTTTTCTTGCTGCAACAATCCCTCTTTACCTTGATAATAAAGCTATCAAAGTTGTTGAGGGTGGAGCTGATGTTACTGAACAACTTCTACAGCACAAATGGGATAAGATCTTCTTCACTGGGAGTCCAAAGGTAGCTAGGATTGTGATGTCTGCAGCTGCAAAGCATCTAACTCCTGTTACTTTAGAGCTCGGGGGAAAATGTCCTGCAATCTTTGATTACTCCTCTGTCCATTCCAATATGAAGGTAGCGGCCAAGAGAATCGTTGGAGGAAAATGGGGGCTGTGCGCCGGGCAGGCGTGCATAGGGATAGATTATGTGCTTGTGGAGGATAAGTTTGCTTCAGAATTGATCGAGTCATTAAAGCGAATACTCAAGAAGTTTTACGGTGAAAACTTGAAAAACTCGACGAGCATAGCCCGAATTGTTAATGAGAAAAATGTTGAAAGAATAAGCAATCTTCTCAGAGACCCTAAGGTTGCTGCTTCCATTGTCCATGGTGGCTCTATTGACAAAGAAAAACTCTTCATTGAGCCAACAATATTGTTGAATCCTCCAATCGACGCTGATATCATGACCGAAGAAATCTTCGGTCCCCTGCTACCGATAATCACATTGAACAAAATTGAAGAAAGCATTGAGTTCATCAACGCAAGACCAAAACCTCTTGCTCTCTATGCCTTCACGGAAGACGAAACTCTCAAGAAACGGATTTTATCCGAAACATCATCAGGAAGTGTCACATTCAATGATACCGTGATTCAGTTTGTGTGTGATTCGCTACCATTCGGCGGTGTTGGTCAGAGTGGTTTCGGGAGATATCATGGCAAGTATTCATTTGATACATTCAGCCATGAAAAAGCAGTGATGCAGAGAAGCTTTTTGATAGAACTCGACCCACGATATCCACCATGGAACGATTTCAAGCTCAAGTTCATTAGATTGGCATATCGATTCGACTATTTGGGGCTGGTGCTGCTCTTTTTGGGGTTAAAGAATATCAGAGCTATTGAAAGCTTTTTTTCCAAGGTTTCATGGATTCTTGTGAAGGGTCAACGTCACTCCGGTGGTGACACCATCAACGTGGTTAACTACATTATGGTGATTACTCCTCTACGACCTATCGTTCAAAGACCTCAGCCACCTGTTGCTCCACAACCCCAGAGAAGTACTATACTCAACCAAATCCTAGGATATCACCAACACAACAACAACCATATTCCTTCCCCACGAGCACTTTTCAAAATCAAAATCCAGCTTATCAACCACCACAACAACAATTTTACGATCCTGGGTACTACCCACATTTTCCTCAGCATTTTAATCCGCGAACTAACTCCCCAAATCTCCTTCAGCACTTGA 1863 42.14 MQKKEKETPHQKDQIKTSFSKTKMEANLEVLRESFKNGRTRSFEWRKNQLSSLIQFIHDKENVIFEALYQDLGKHPVEIFRDEVGIVLKSANNALCSLHKWMAPKKKSVPLLFFPAKGEVLSEPFGLVLIISSWNFPLSLALDPLIGAISAGNTAVIKPSEYNPVFSSFLAATIPLYLDNKAIKVVEGGADVTEQLLQHKWDKIFFTGSPKVARIVMSAAAKHLTPVTLELGGKCPAIFDYSSVHSNMKVAAKRIVGGKWGLCAGQACIGIDYVLVEDKFASELIESLKRILKKFYGENLKNSTSIARIVNEKNVERISNLLRDPKVAASIVHGGSIDKEKLFIEPTILLNPPIDADIMTEEIFGPLLPIITLNKIEESIEFINARPKPLALYAFTEDETLKKRILSETSSGSVTFNDTVIQFVCDSLPFGGVGQSGFGRYHGKYSFDTFSHEKAVMQRSFLIELDPRYPPWNDFKLKFIRLAYRFDYLGLVLLFLGLKNIRAIESFFSKVSWILVKGQRHSGGDTINVVNYIMVITPLRPIVQRPQPPVAPQPQRSTILNQILGYHQHNNNHIPSPRALFKIKIQLINHHNNNFTILGTTHIFLSILIRELTPQISFST 620
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 22301173 22305909 + CcPI632755_07g009630.1 Cco07g0963 183616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco07g0963 620 FunFam Aldehyde dehydrogenase 32 243 - -
Cco07g0963 620 SUPERFAMILY ALDH-like 25 472 IPR016161 GO:0016491(InterPro)
Cco07g0963 620 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 32 454 IPR016162 GO:0016491(InterPro)
Cco07g0963 620 PANTHER ALDEHYDE DEHYDROGENASE 22 497 IPR012394 GO:0004029(PANTHER)|GO:0005737(PANTHER)|GO:0006081(PANTHER)|GO:0006081(InterPro)
Cco07g0963 620 Pfam Aldehyde dehydrogenase family 19 456 IPR015590 GO:0016491(InterPro)
Cco07g0963 620 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 233 436 IPR016163 GO:0016620(InterPro)
Cco07g0963 620 FunFam Aldehyde dehydrogenase 233 436 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco02g2482 Cco-Chr2:37147163 Cco07g0963 Cco-Chr7:22301173 4.30E-162 dispersed
Cco07g0963 Cco-Chr7:22301173 Cco11g1635 Cco-Chr11:29176048 9.80E-135 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco07g0963 K00128 - csv:101221321 867.455