Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cco07g0983 | ATGTTTCACTTTCACACTCAGCTTATACTCTGTTTTCTCCCTTCTCTTTTAGCTCTCTTCCTCTTCCTCATTCTGCTCCGACGGAACAGAAATGCCCTCCATCTTGATCTTCCTCCCGGAACCATGGGCTGGCCTTTTCTCGGCGAGACCATCGCCTATCTTCGCCCCTATTCCGCCACCACCATCGGAGCTTTCATGGAGAGCCACATCAAGAGATATGGTAAAGTGTACAAGTCGAACCTGTTCGGAGAGCCGACGGTGGTGTCGGCCGATGCCGGACTGAATCGGTACATCCTGCAAAATGAAGGGCGGCTGTTTGAATGCAGCTATCCGCGGAGCATCGGTGGGATCCTTGGGAAATGGTCGATGTTGGTTACCGTCGGCGACATGCACCGGGATATGAGAATGATATCTCTGAACTTTCTGAGTCAGAGTAGGCTCAAGAATCATCTCTTGAAGGAGGTTGAGAACCAGACGCTTCTCGTCCTCCGTTCTTGGAAAGATTCTTCCACGTTTTTGGCGCAGGACGAAGCCAAAAAGTTTACTTTCAATTTAATGGCGAAACACATCATGAGTTTGGATCCATGGAAGTTGGAGACGGAGATGTTGAAGAAGGAGTATGTGACTTTCATGAAAGGAGTGATTTCTCCGCCGCTGAATCTTCCCGGAACGCCGTACAGACGAGCTTTGAAGTCTCGGTCGACGATCTTGAAGTTCATCGAACGGAAAATGGAGGAACGGAAGTTGAAAATGGAAACCGAAGGCGGTGATTTCGAGGATGATGATCTACTCGGTTGGGCATTGAAGCACTCAAATCTCTCAACGGAGCAAATCCTGGACCTGATTCTTAGCTTGCTGTTCGCCGGCCACGAGACATCTTCGGTCGCCATAGCTTTAGCCATCTTCTTCCTCTCTGGCAGTCCGGCTGCCGTTCAACAGTTGACTGAAGAACACCTGGAAATCTCCAGAAGCAATAAGCGAGTGGGAAAGACGGAATTGGATTGGGATGATTACAAGAAAATGGAATTCACGCAAAGTGTGATTAACGAGACGCTTCGGCTTGGAAACGTGGTGAGATTTCTTCATAGAAAGGCACTGAAGGATGTACGGTACAGAGGTTATTTCATTCCACGTGGATGGAAAGTGCTTCCAGTCATTTCTGCAGCGCATTTGGATCCTCTAGTTTTTGACCAACCTCATCACTTTAATCCATGGAGATGGCAGCAAATGAATGGATCGTCATTAGGTAACATGAGCACGACGATAACCAATAATTTCATGCCATTTGGAGGAGGACCGCGATTATGCACTGGTTCAGAACTAGCAAAGCTTGAAATGGCCATTTTTATCCATCATTTGGTATTGAACTACCAATGGGAATTGGTTGGTTCAGATCAAGCTTTTGCTTACCCTTTTGTTGACTTCCCTAAAGGTCTACCAATCAGAATCCGCCATCGCACTCTCGTGTAA | 1470 | 47.41 | MFHFHTQLILCFLPSLLALFLFLILLRRNRNALHLDLPPGTMGWPFLGETIAYLRPYSATTIGAFMESHIKRYGKVYKSNLFGEPTVVSADAGLNRYILQNEGRLFECSYPRSIGGILGKWSMLVTVGDMHRDMRMISLNFLSQSRLKNHLLKEVENQTLLVLRSWKDSSTFLAQDEAKKFTFNLMAKHIMSLDPWKLETEMLKKEYVTFMKGVISPPLNLPGTPYRRALKSRSTILKFIERKMEERKLKMETEGGDFEDDDLLGWALKHSNLSTEQILDLILSLLFAGHETSSVAIALAIFFLSGSPAAVQQLTEEHLEISRSNKRVGKTELDWDDYKKMEFTQSVINETLRLGNVVRFLHRKALKDVRYRGYFIPRGWKVLPVISAAHLDPLVFDQPHHFNPWRWQQMNGSSLGNMSTTITNNFMPFGGGPRLCTGSELAKLEMAIFIHHLVLNYQWELVGSDQAFAYPFVDFPKGLPIRIRHRTLV | 489 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 22659311 | 22664394 | - | CcPI632755_07g009830.1 | Cco07g0983 | 183636 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cco07g0983 | 489 | SUPERFAMILY | Cytochrome P450 | 31 | 486 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco07g0983 | 489 | PRINTS | P450 superfamily signature | 427 | 436 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco07g0983 | 489 | PRINTS | P450 superfamily signature | 346 | 357 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco07g0983 | 489 | PRINTS | P450 superfamily signature | 436 | 447 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco07g0983 | 489 | PRINTS | P450 superfamily signature | 288 | 305 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco07g0983 | 489 | Pfam | Cytochrome P450 | 38 | 462 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco07g0983 | 489 | PRINTS | E-class P450 group I signature | 345 | 363 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco07g0983 | 489 | PRINTS | E-class P450 group I signature | 426 | 436 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco07g0983 | 489 | PRINTS | E-class P450 group I signature | 385 | 409 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco07g0983 | 489 | PRINTS | E-class P450 group I signature | 436 | 459 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco07g0983 | 489 | PRINTS | E-class P450 group I signature | 70 | 89 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco07g0983 | 489 | PRINTS | E-class P450 group I signature | 277 | 294 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco07g0983 | 489 | CDD | CYP90-like | 69 | 483 | - | - | |
| Cco07g0983 | 489 | PANTHER | CYTOCHROME P450 26 | 36 | 457 | - | GO:0004497(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER) | |
| Cco07g0983 | 489 | Gene3D | Cytochrome P450 | 26 | 484 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco07g0983 | 489 | FunFam | Cytochrome P450 90B1 | 26 | 485 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cco06g0416 | Cco-Chr6:4522798 | Cco07g0983 | Cco-Chr7:22659311 | 2.00E-82 | dispersed | |
| Cco07g0422 | Cco-Chr7:4711829 | Cco07g0983 | Cco-Chr7:22659311 | 1.20E-95 | dispersed | |
| Cco07g0983 | Cco-Chr7:22659311 | Cco07g1443 | Cco-Chr7:28529488 | 5.40E-88 | dispersed | |
| Cco07g0983 | Cco-Chr7:22659311 | Cco09g0055 | Cco-Chr9:478274 | 2.20E-89 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cco07g0983 | K09587 | - | csv:101211854 | 892.108 |