Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco07g1069 ATGGCTACCGGCTTTCTGCTATCACTCTTCTTCTTCACTCCGCCATTAGGAGAGGTGACTCTTCATCTTCCAGCGATGAAACAGCGGCTTCGTTTTGGTTGCGCTGTCAGTTCCGAAACAATGTTCATCGATGGATCTATGTTTCTCTCTATCCTTTTTCTTGCTTTCTACTTAACCTTCTATTTCTACTCCCTCTCACAATCCCATGCCGGACGCTATCTGCTGCTTCTCCTTTGCATTCTGCAACGGAAGGTGAAACATGTTACAAGCAATGGAGAACAGGTACACGTAAAGACAGGAAAATCCAATGGTTTCCCTAATGGGAAGAGTGAAGATCTAGCTGCAACTCGAATTCAAAATGCATTTCGTGCATTTACGGCCAGAAAGGATGTAAATAATTCGAAAGTGCCAGAGAGATGCCAGGATCTAATTCAAGGTGGAATGGCTACAAAACAAGTGTTAAGCTTCATTCATTCATGGAGCAGAATGCAGCAAGAAATTAGAGCACGTAGACTCTGTATGGTCACAGAATATCGAGTCAAGCAAAAGAAACTGGAAAATCAGCTGAAGCTTGAGGCTAAAATTCATGAACTTGAGGAAAAATGGTGCGGTGGGTCCGAAACAAAGGAGGAATTACTTTTCAAGATTCAGCAACGAGAAGAAGCTGCTGTAAGACGGGAGCGGGCTATGGCTTATGCATTCTCTCATCAGTGGAGGGCCAATTCCATCTTAGATCTGAGCCCGGCTTCATACAGCCTTGACAAAGAAAACTGGGGATGGAGCTGGAAGGACAGATGGATTGCTGCTCGGCCATGGGAGATCCGAGCTAATACTCATCCCACCATTCCAAAGAAGGTGCAGACGAAACAAACAAGCAAACTCAATAAAGTGGCATATCAATCGGGGTCGAAGGTCTCAAACTTAGCCAGATATTCTTCGTCGAACAGCAAGGGGAGTTCAAAGGCCAGAAATTCTGCTATAGCCAACAGCTGA 993 44.91 MATGFLLSLFFFTPPLGEVTLHLPAMKQRLRFGCAVSSETMFIDGSMFLSILFLAFYLTFYFYSLSQSHAGRYLLLLLCILQRKVKHVTSNGEQVHVKTGKSNGFPNGKSEDLAATRIQNAFRAFTARKDVNNSKVPERCQDLIQGGMATKQVLSFIHSWSRMQQEIRARRLCMVTEYRVKQKKLENQLKLEAKIHELEEKWCGGSETKEELLFKIQQREEAAVRRERAMAYAFSHQWRANSILDLSPASYSLDKENWGWSWKDRWIAARPWEIRANTHPTIPKKVQTKQTSKLNKVAYQSGSKVSNLARYSSSNSKGSSKARNSAIANS 330
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 24212594 24218422 + CcPI632755_07g010690.1 Cco07g1069 183722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco07g1069 330 ProSiteProfiles IQ motif profile. 111 139 - -
Cco07g1069 330 MobiDBLite consensus disorder prediction 302 330 - -
Cco07g1069 330 Coils Coil 181 201 - -
Cco07g1069 330 PANTHER IQ-DOMAIN 5-RELATED 102 320 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco07g1069 Cco-Chr7:24212594 Cco09g2240 Cco-Chr9:36699663 5.80E-25 dispersed
Cco07g1069 Cco-Chr7:24212594 Cco04g2133 Cco-Chr4:35160524 6.50E-53 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco07g1069 - - - 0.0