Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco07g1129 ATGATCAAAATCCTTAACAAATATTGTATGGAACTTTTTGAGAAGTCGAACGTTCTTGAGGACATTCTTCTCCTTGCTTCTCAAGCGAAAGTTATGAGAGTTTCGTCTTGTCTATCCATCGAGCGAGAGGGACTGTCTTTGAACCTTCGAGACCACCGAGCCTCAGTCACCGGGCGGGGCCGAGGCCAACTCTGGTTTCGTCTCATCGGGGCATATCGTTGTTTGATGTCGAGCAGCAACATGGGGCTGCGTTTTATGTCATACCCACGGAAGAATCTGCTGACGAAGTTCTCGTCTCTGTTCCCAATAACTGCAATTCCCAGTATCAAGACTGTCAAAGGGGGTTTCTCTTGCAGTTGTAGTGTTGGTTGTCAATTCAACTTGGATGATTTTAGCAGCAAGAAGAGGCGTTTGGAAAGAGTTCACTCCACCAATTCAAATGGGAAATTTAGCAATAAGCAGTTTATTAGTGTTGATCCACAACTTTACGAGTATATTCTCTCCAATGTTCGAGAGCCTGAGATCCTGGGGAAACTTCGTGAGGAGACTGCCTCAATGCGTGGTAGCAAAATGCAGGTATCCCCCGATCAAGCACAACTTCTTGCAATGCTTGTTCAGATTCTTGGTGCTAAGAGGTGCATCGAAGTGGGTGTTTACACTGGATATTCGTCTTTGGCCGTAGCACTAGTCCTGCCAGAATCAGGGCATTTAGTTGCCTGTGAAAGAGATCTCAAATACCTTGAGGTTGCTAAAAGATATTATGAACTTGCCGGTGTTTCACACAAAGTGGATATGAGACATGGACTTGCAGCAGATACACTCAAATTACTTATTTCAAATGGTGAAGCTTGCAGCTATGATTTTGCCTTCATCGATGCCGAGAAGAGGATGAATGAGGAATACTTCGAACTGCTACTACAATTGGTCAGGGTTGGAGGCTTAATTGTGATTGACAATGTCCTTTGGTACGGAAAAGTAGCTGACCCGATGGTTAATGACAAGAAAACCGATAGCATCAGGAGATTGAATAAAAAGATAATGGAAGACAGTCGAGTTGGGATAAGTATGGTACCTATTGGAGATGGCATGACAATTTGCCAAAAGAGATGA 1110 43.87 MIKILNKYCMELFEKSNVLEDILLLASQAKVMRVSSCLSIEREGLSLNLRDHRASVTGRGRGQLWFRLIGAYRCLMSSSNMGLRFMSYPRKNLLTKFSSLFPITAIPSIKTVKGGFSCSCSVGCQFNLDDFSSKKRRLERVHSTNSNGKFSNKQFISVDPQLYEYILSNVREPEILGKLREETASMRGSKMQVSPDQAQLLAMLVQILGAKRCIEVGVYTGYSSLAVALVLPESGHLVACERDLKYLEVAKRYYELAGVSHKVDMRHGLAADTLKLLISNGEACSYDFAFIDAEKRMNEEYFELLLQLVRVGGLIVIDNVLWYGKVADPMVNDKKTDSIRRLNKKIMEDSRVGISMVPIGDGMTICQKR 369
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 24985467 24991426 + CcPI632755_07g011290.1 Cco07g1129 183782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco07g1129 369 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 163 369 IPR029063 -
Cco07g1129 369 Pfam O-methyltransferase 170 368 IPR002935 GO:0008171(InterPro)
Cco07g1129 369 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 152 369 IPR002935 GO:0008171(InterPro)
Cco07g1129 369 Gene3D Vaccinia Virus protein VP39 141 369 IPR029063 -
Cco07g1129 369 PANTHER O-METHYLTRANSFERASE-RELATED 156 368 IPR050362 GO:0008757(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco07g1129 Cco-Chr7:24985467 Cco11g1420 Cco-Chr11:26965453 2.10E-36 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco07g1129 - - - 0.0