Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco07g1132 ATGGCAGAGGAAGTGAAGCTGTTAGATTTCTGGCCCAGCATGTTTGGGATGCGAGTTAGAATAGCGTTGGCTGAGAAGGGCGTGGCTTATGAGTACGTGGAAGAAGATCTGAAGAATAAGAGCCCTTTGCTTCTTCAAATGAACCCAATCCACAAGAAGATCCCTGTTCTTATTCACAATGGAAAACCCGTGTGTGAATCTTCAATAATCGTTGAGTATATTGATGAAGTGTGGAAGGATAATGCTGCTTTGTTGCCGTCTCATCCTTATCAGAGAGCTCAGGCCAGGTTTTGGGTTGATTTCATCGATAAGAAGCTTTATGATGTTACAAGGAAGATATGGGGCAGCAAGGGAGAAGAGCATGAGACAGGAAAGAAGGAGGTAATAGAAATATTGAAGCAATTGGAAGAAGTTCTTGGAGAGAAGGCTTACTTTGGAGGTGAAAGTTTGGGAATTGTAGACATTTCTTTGATTGGATTCTACAGTTGGTTTTATACCTATGAGACCATTGGCAACTTCAGCTTTGAGTCCGAGTGTCCAAAGATAGTGAGTTGGGGTAAGAGATGCTTGCAAAAGGAGAGTGTTGCCAAGTCCCTCCCTGACCCAAAAAAGATCTATGACTTTGTGGTTCAACTACAGAAAGCTTTGGGGGTTTGA 657 42.77 MAEEVKLLDFWPSMFGMRVRIALAEKGVAYEYVEEDLKNKSPLLLQMNPIHKKIPVLIHNGKPVCESSIIVEYIDEVWKDNAALLPSHPYQRAQARFWVDFIDKKLYDVTRKIWGSKGEEHETGKKEVIEILKQLEEVLGEKAYFGGESLGIVDISLIGFYSWFYTYETIGNFSFESECPKIVSWGKRCLQKESVAKSLPDPKKIYDFVVQLQKALGV 218
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 25014093 25015587 + CcPI632755_07g011320.1 Cco07g1132 183785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco07g1132 218 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 209 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
Cco07g1132 218 SUPERFAMILY GST C-terminal domain-like 76 214 IPR036282 -
Cco07g1132 218 SFLD Main (cytGST) 2 216 - -
Cco07g1132 218 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 216 IPR010987 -
Cco07g1132 218 Pfam Glutathione S-transferase, C-terminal domain 117 192 IPR004046 -
Cco07g1132 218 CDD GST_C_Tau 89 212 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Cco07g1132 218 SUPERFAMILY Thioredoxin-like 5 107 IPR036249 -
Cco07g1132 218 SFLD Main.3: Omega- and Tau-like 2 216 IPR045073 -
Cco07g1132 218 FunFam Tau class glutathione S-transferase 1 87 - -
Cco07g1132 218 FunFam Glutathione S-transferase U20 88 218 - -
Cco07g1132 218 Pfam Glutathione S-transferase, N-terminal domain 4 76 IPR004045 -
Cco07g1132 218 Gene3D - 88 218 - -
Cco07g1132 218 Gene3D Glutaredoxin 1 87 - -
Cco07g1132 218 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Cco07g1132 218 CDD GST_N_Tau 5 78 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco01g0892 Cco-Chr1:9839604 Cco07g1132 Cco-Chr7:25014093 3.00E-73 dispersed
Cco05g2702 Cco-Chr5:34922965 Cco07g1132 Cco-Chr7:25014093 3.30E-30 dispersed
Cco07g1132 Cco-Chr7:25014093 Cco07g1134 Cco-Chr7:25030187 6.10E-100 dispersed
Cco07g1132 Cco-Chr7:25014093 Cco07g1133 Cco-Chr7:25027668 7.80E-87 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco07g1132 K00799 - csv:101218562 397.127