Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco07g1133 ATGGGAGATGAAGTAAAATTGCTGGATTTTTGGGGAAGCATGTTTGGCATGCGAGTTAGAATAGCTCTGGCCGAGAAGGGTGTAGTGTATGAATATGTGGAACAAGACTTGAGGAACAAGAGCCTTTCGCTTCTTCAAATGAACCCAATTTACAAGAAAGTCCCTGTTATGATTCATAATGGAAAACCCATTTGTGAATCTTCCATAATCGTTGAATATATTGAAGAAGTATGGAAGGATAAAGCTCCTAATTTGTTGCCGTTTGATCCTTATGAGAGAGCTCAGGCTAAGTTTTGGGTGGATTTCATGGACAAGAAGCTTTATGAAGCTGCAAAAGGGGTATGGGCAGGGAAAGGAGAGGAGCATGAGGCAGGGAAGAAGGAAGTGATACAAATATTGAAGCAACTAGAAGAAGTAATTGGGGAGAAGGCTTACTTTGGAGGTGATTGTTTGGGATTTGTTGATATTGGTTTGATTGGATACTACACTTGGTTTTATACCTATGAGACTATTGGGAACTTCAGCATTGAGTCTGAGTGTCCAAAGATAATGAGTTGGGTGAAGAGATGTTTGCAAAATGAGAATGTGGCTAAGTCCCTGGCTGACCCCAAGAATGTGTATGAATTTGTGGTTCAATGGAAGAAAAGTTTTGGGCTTGACTAA 663 40.42 MGDEVKLLDFWGSMFGMRVRIALAEKGVVYEYVEQDLRNKSLSLLQMNPIYKKVPVMIHNGKPICESSIIVEYIEEVWKDKAPNLLPFDPYERAQAKFWVDFMDKKLYEAAKGVWAGKGEEHEAGKKEVIQILKQLEEVIGEKAYFGGDCLGFVDIGLIGYYTWFYTYETIGNFSIESECPKIMSWVKRCLQNENVAKSLADPKNVYEFVVQWKKSFGLD 220
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 25027668 25028415 + CcPI632755_07g011330.1 Cco07g1133 183786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco07g1133 220 Gene3D Glutaredoxin 1 87 - -
Cco07g1133 220 FunFam Tau class glutathione S-transferase 1 86 - -
Cco07g1133 220 SFLD Main.3: Omega- and Tau-like 2 217 IPR045073 -
Cco07g1133 220 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Cco07g1133 220 FunFam Glutathione S-transferase U20 89 220 - -
Cco07g1133 220 SFLD Main (cytGST) 2 217 - -
Cco07g1133 220 Pfam Glutathione S-transferase, C-terminal domain 118 192 IPR004046 -
Cco07g1133 220 Gene3D - 89 220 - -
Cco07g1133 220 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 210 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
Cco07g1133 220 SUPERFAMILY GST C-terminal domain-like 76 215 IPR036282 -
Cco07g1133 220 CDD GST_C_Tau 90 210 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Cco07g1133 220 SUPERFAMILY Thioredoxin-like 5 108 IPR036249 -
Cco07g1133 220 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 217 IPR010987 -
Cco07g1133 220 Pfam Glutathione S-transferase, N-terminal domain 5 76 IPR004045 -
Cco07g1133 220 CDD GST_N_Tau 5 78 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco07g1133 Cco-Chr7:25027668 Cco07g1135 Cco-Chr7:25034670 1.90E-16 dispersed
Cco07g1132 Cco-Chr7:25014093 Cco07g1133 Cco-Chr7:25027668 7.80E-87 tandem
Cco07g1133 Cco-Chr7:25027668 Cco07g1134 Cco-Chr7:25030187 4.20E-88 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco07g1133 K00799 - csv:101218323 379.793