Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco07g1133 | ATGGGAGATGAAGTAAAATTGCTGGATTTTTGGGGAAGCATGTTTGGCATGCGAGTTAGAATAGCTCTGGCCGAGAAGGGTGTAGTGTATGAATATGTGGAACAAGACTTGAGGAACAAGAGCCTTTCGCTTCTTCAAATGAACCCAATTTACAAGAAAGTCCCTGTTATGATTCATAATGGAAAACCCATTTGTGAATCTTCCATAATCGTTGAATATATTGAAGAAGTATGGAAGGATAAAGCTCCTAATTTGTTGCCGTTTGATCCTTATGAGAGAGCTCAGGCTAAGTTTTGGGTGGATTTCATGGACAAGAAGCTTTATGAAGCTGCAAAAGGGGTATGGGCAGGGAAAGGAGAGGAGCATGAGGCAGGGAAGAAGGAAGTGATACAAATATTGAAGCAACTAGAAGAAGTAATTGGGGAGAAGGCTTACTTTGGAGGTGATTGTTTGGGATTTGTTGATATTGGTTTGATTGGATACTACACTTGGTTTTATACCTATGAGACTATTGGGAACTTCAGCATTGAGTCTGAGTGTCCAAAGATAATGAGTTGGGTGAAGAGATGTTTGCAAAATGAGAATGTGGCTAAGTCCCTGGCTGACCCCAAGAATGTGTATGAATTTGTGGTTCAATGGAAGAAAAGTTTTGGGCTTGACTAA | 663 | 40.42 | MGDEVKLLDFWGSMFGMRVRIALAEKGVVYEYVEQDLRNKSLSLLQMNPIYKKVPVMIHNGKPICESSIIVEYIEEVWKDKAPNLLPFDPYERAQAKFWVDFMDKKLYEAAKGVWAGKGEEHEAGKKEVIQILKQLEEVIGEKAYFGGDCLGFVDIGLIGYYTWFYTYETIGNFSIESECPKIMSWVKRCLQNENVAKSLADPKNVYEFVVQWKKSFGLD | 220 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 25027668 | 25028415 | + | CcPI632755_07g011330.1 | Cco07g1133 | 183786 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco07g1133 | 220 | Gene3D | Glutaredoxin | 1 | 87 | - | - | |
Cco07g1133 | 220 | FunFam | Tau class glutathione S-transferase | 1 | 86 | - | - | |
Cco07g1133 | 220 | SFLD | Main.3: Omega- and Tau-like | 2 | 217 | IPR045073 | - | |
Cco07g1133 | 220 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 3 | 82 | IPR004045 | - | |
Cco07g1133 | 220 | FunFam | Glutathione S-transferase U20 | 89 | 220 | - | - | |
Cco07g1133 | 220 | SFLD | Main (cytGST) | 2 | 217 | - | - | |
Cco07g1133 | 220 | Pfam | Glutathione S-transferase, C-terminal domain | 118 | 192 | IPR004046 | - | |
Cco07g1133 | 220 | Gene3D | - | 89 | 220 | - | - | |
Cco07g1133 | 220 | PANTHER | GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING | 4 | 210 | IPR045073 | GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER) | |
Cco07g1133 | 220 | SUPERFAMILY | GST C-terminal domain-like | 76 | 215 | IPR036282 | - | |
Cco07g1133 | 220 | CDD | GST_C_Tau | 90 | 210 | IPR045074 | GO:0004364(InterPro)|GO:0006749(InterPro) | |
Cco07g1133 | 220 | SUPERFAMILY | Thioredoxin-like | 5 | 108 | IPR036249 | - | |
Cco07g1133 | 220 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 89 | 217 | IPR010987 | - | |
Cco07g1133 | 220 | Pfam | Glutathione S-transferase, N-terminal domain | 5 | 76 | IPR004045 | - | |
Cco07g1133 | 220 | CDD | GST_N_Tau | 5 | 78 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco07g1133 | Cco-Chr7:25027668 | Cco07g1135 | Cco-Chr7:25034670 | 1.90E-16 | dispersed | |
Cco07g1132 | Cco-Chr7:25014093 | Cco07g1133 | Cco-Chr7:25027668 | 7.80E-87 | tandem | |
Cco07g1133 | Cco-Chr7:25027668 | Cco07g1134 | Cco-Chr7:25030187 | 4.20E-88 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco07g1133 | K00799 | - | csv:101218323 | 379.793 |