Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco07g1134 ATGGGGGACGAAGTGAAGCTTTTAGATTTTTGGCCCAGCATGTTCGGTATGCGAGTCAGAGTAGCTCTGGCTCTAAAGGGCGTACCGAACGAATATGTGGATGAAGATCTAAGGAACAAGAGCTCTTTGCTTCTTCAAATGAACCCAATTCATAAGAAGATCCCTGTTCTTGTTCATAATGGAAAACCCATTTGTGAATCTTCCATAATCGTTCAGTATATTGATGAAGTTTGGAAGGATAAAGCTCCTCTGTTACCATCCGATCCTTATGACAGAGCTCAGGCCAGATTTTGGGTAGATTTCATCGACAAGAAGCTTTTTGATGGTGGAAGGAAAATTTGGGCTACCAAAGGAGAGGAGCAAGAAGAAGGTAAGAAGGAGGTAATAGGAATATTGAAGCAATTGGAAGAAGTTCTTGGGGAGAAGGGTTTGTTTGGAGGTGAATGTTTGGGATTTTTAGACATTGTTTTGATTGGATATTACACTTGGTTTTATGCCTATGAGACCATTGGAAACTTCAGCATTGAGGCTGAGTGTCCAAAGATAATGAGTTGGGTGAAGAGATGCTTACAAAATGAGAGTGTTGCTAAGTCTCTGCCTGACCCCAAGAAGGTTTGTGATTTTGTGCTTCAAATGAAGAAAAAGTATGGCCTTGACTAA 660 40.91 MGDEVKLLDFWPSMFGMRVRVALALKGVPNEYVDEDLRNKSSLLLQMNPIHKKIPVLVHNGKPICESSIIVQYIDEVWKDKAPLLPSDPYDRAQARFWVDFIDKKLFDGGRKIWATKGEEQEEGKKEVIGILKQLEEVLGEKGLFGGECLGFLDIVLIGYYTWFYAYETIGNFSIEAECPKIMSWVKRCLQNESVAKSLPDPKKVCDFVLQMKKKYGLD 219
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 25030187 25030964 + CcPI632755_07g011340.1 Cco07g1134 183787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco07g1134 219 Gene3D Glutaredoxin 1 87 - -
Cco07g1134 219 CDD GST_C_Tau 89 212 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Cco07g1134 219 Gene3D - 88 219 - -
Cco07g1134 219 Pfam Glutathione S-transferase, C-terminal domain 116 191 IPR004046 -
Cco07g1134 219 SFLD Main (cytGST) 2 217 - -
Cco07g1134 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Cco07g1134 219 FunFam Tau class glutathione S-transferase 1 87 - -
Cco07g1134 219 SUPERFAMILY GST C-terminal domain-like 76 216 IPR036282 -
Cco07g1134 219 Pfam Glutathione S-transferase, N-terminal domain 5 76 IPR004045 -
Cco07g1134 219 FunFam Glutathione S-transferase U20 88 219 - -
Cco07g1134 219 SFLD Main.3: Omega- and Tau-like 2 217 IPR045073 -
Cco07g1134 219 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Cco07g1134 219 CDD GST_N_Tau 5 78 - -
Cco07g1134 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 216 IPR010987 -
Cco07g1134 219 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 209 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco06g1642 Cco-Chr6:27029622 Cco07g1134 Cco-Chr7:25030187 6.80E-41 dispersed
Cco07g1132 Cco-Chr7:25014093 Cco07g1134 Cco-Chr7:25030187 6.10E-100 dispersed
Cco07g1133 Cco-Chr7:25027668 Cco07g1134 Cco-Chr7:25030187 4.20E-88 tandem
Cco07g1134 Cco-Chr7:25030187 Cco07g1135 Cco-Chr7:25034670 1.60E-15 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco07g1134 K00799 - csv:101217848 407.142