Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco07g1134 | ATGGGGGACGAAGTGAAGCTTTTAGATTTTTGGCCCAGCATGTTCGGTATGCGAGTCAGAGTAGCTCTGGCTCTAAAGGGCGTACCGAACGAATATGTGGATGAAGATCTAAGGAACAAGAGCTCTTTGCTTCTTCAAATGAACCCAATTCATAAGAAGATCCCTGTTCTTGTTCATAATGGAAAACCCATTTGTGAATCTTCCATAATCGTTCAGTATATTGATGAAGTTTGGAAGGATAAAGCTCCTCTGTTACCATCCGATCCTTATGACAGAGCTCAGGCCAGATTTTGGGTAGATTTCATCGACAAGAAGCTTTTTGATGGTGGAAGGAAAATTTGGGCTACCAAAGGAGAGGAGCAAGAAGAAGGTAAGAAGGAGGTAATAGGAATATTGAAGCAATTGGAAGAAGTTCTTGGGGAGAAGGGTTTGTTTGGAGGTGAATGTTTGGGATTTTTAGACATTGTTTTGATTGGATATTACACTTGGTTTTATGCCTATGAGACCATTGGAAACTTCAGCATTGAGGCTGAGTGTCCAAAGATAATGAGTTGGGTGAAGAGATGCTTACAAAATGAGAGTGTTGCTAAGTCTCTGCCTGACCCCAAGAAGGTTTGTGATTTTGTGCTTCAAATGAAGAAAAAGTATGGCCTTGACTAA | 660 | 40.91 | MGDEVKLLDFWPSMFGMRVRVALALKGVPNEYVDEDLRNKSSLLLQMNPIHKKIPVLVHNGKPICESSIIVQYIDEVWKDKAPLLPSDPYDRAQARFWVDFIDKKLFDGGRKIWATKGEEQEEGKKEVIGILKQLEEVLGEKGLFGGECLGFLDIVLIGYYTWFYAYETIGNFSIEAECPKIMSWVKRCLQNESVAKSLPDPKKVCDFVLQMKKKYGLD | 219 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 25030187 | 25030964 | + | CcPI632755_07g011340.1 | Cco07g1134 | 183787 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco07g1134 | 219 | Gene3D | Glutaredoxin | 1 | 87 | - | - | |
Cco07g1134 | 219 | CDD | GST_C_Tau | 89 | 212 | IPR045074 | GO:0004364(InterPro)|GO:0006749(InterPro) | |
Cco07g1134 | 219 | Gene3D | - | 88 | 219 | - | - | |
Cco07g1134 | 219 | Pfam | Glutathione S-transferase, C-terminal domain | 116 | 191 | IPR004046 | - | |
Cco07g1134 | 219 | SFLD | Main (cytGST) | 2 | 217 | - | - | |
Cco07g1134 | 219 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 3 | 82 | IPR004045 | - | |
Cco07g1134 | 219 | FunFam | Tau class glutathione S-transferase | 1 | 87 | - | - | |
Cco07g1134 | 219 | SUPERFAMILY | GST C-terminal domain-like | 76 | 216 | IPR036282 | - | |
Cco07g1134 | 219 | Pfam | Glutathione S-transferase, N-terminal domain | 5 | 76 | IPR004045 | - | |
Cco07g1134 | 219 | FunFam | Glutathione S-transferase U20 | 88 | 219 | - | - | |
Cco07g1134 | 219 | SFLD | Main.3: Omega- and Tau-like | 2 | 217 | IPR045073 | - | |
Cco07g1134 | 219 | SUPERFAMILY | Thioredoxin-like | 5 | 106 | IPR036249 | - | |
Cco07g1134 | 219 | CDD | GST_N_Tau | 5 | 78 | - | - | |
Cco07g1134 | 219 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 88 | 216 | IPR010987 | - | |
Cco07g1134 | 219 | PANTHER | GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING | 4 | 209 | IPR045073 | GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco06g1642 | Cco-Chr6:27029622 | Cco07g1134 | Cco-Chr7:25030187 | 6.80E-41 | dispersed | |
Cco07g1132 | Cco-Chr7:25014093 | Cco07g1134 | Cco-Chr7:25030187 | 6.10E-100 | dispersed | |
Cco07g1133 | Cco-Chr7:25027668 | Cco07g1134 | Cco-Chr7:25030187 | 4.20E-88 | tandem | |
Cco07g1134 | Cco-Chr7:25030187 | Cco07g1135 | Cco-Chr7:25034670 | 1.60E-15 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco07g1134 | K00799 | - | csv:101217848 | 407.142 |