Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco07g1152 ATGACCCATTTTTATCTATTTTTCCTTGAAGATAGAAGTTGGTTTTGGCTGAGGATTGTGCAAAGGCATGGAGTTGGCAAAGACGAAGACGAAGACGATGAACAATTTTGGATGCCATCTTTTGACTTGAATCATCTTTGGAGAACTGTTTCTTACCATGGCTTTACAAACAATTATCCAAGAAACAACGATAAATTCATCGATGGCCTTCTTCCTCCAGGCTTTGACCAAAAATCCTGCTTAAGCCGATACCAACTAAATCTCTACAAAAAACCCTCTCCTCACTACCCCTCTTTCCCTCTCCTCTCAAAGCTTCGTCGCTATGAAGCTCTCCACAGCCGTTGCGGCCCCAATTCCCCGTCATTCCGCCGAGCTCTCGTCAGTCTTACCTCACCCACAAACTCCACATCCTCATCCGAGGACGATTGCAAATATCTCGTCATTTTAACCCGCGATGGCCTTGGCAACCGAATCCTCGCCCTTCTCTCTGCCTTCTTCTATGCCCTAATCGCCAATCGCGTCATTCTAATCGACCAAGGCAACATTCTTGATGATCTATTCTGTGAGCCCTTTCTCGGATCCTCCTGGCTTCTTCCCTCCGATTTTCCTCTCCGTCACAAATTTGGGTCGTTCCGTCAATCCTTCCCCGGGTCTTTTGGCAATATTTTGAAGAATGGAATGTTGAAAAAAACAATCGAAGATTCACCTCCGCCTTATTTGTATCTTCATCTCTCTCATGACGCCGGCGACTATGATAAGCTCTTTTATTGCGACCGACAACAAAATCTTCTAAAGAAGGTCCCATGGTTGATTATGGAGACAAATAACTACCTGGTTCCGGGAATTTTTCTAGTTTCTTCTTTCAGAGAAGAGCTTAATAAACTCTTTCCGGTGAAGGACACTGTGTTTCACCATCTGGGACGGTACCTTTTCCACCCGACAAATGACGTTTGGGGGCTGATTTTGAGATCTTACAAGCCATACTTTTCTAGAGCAAACGAAATGGTCGGGATTCAAATCCGAATTTTTGGGTCAGAATCTGGGTCGATTCAGGACCAAATGAATCAACTTCTAGTTTGCACACAGAAGAAGAAATTACTACCTGAGCTCGAGCCATCATCACCAGTGAAGATGAACTCCACCTCTCACAAGGTGAAAGTTGTGCTAGTGACGTCTCTAAGCGCTCAATACTCAGAAACCTTAAAGGAGATGTATTGGGATCATCCGACTGTCGACGGCGAGGTGGTGGCAGTGTACCAGCCGAGCCACGAGGGGATTCAAAGCTCCGACAGTAGGATGCACAACCGGAAGGCATTGGCGGAGATGTACCTTTTGAGCTTGAGCGACGTGTTGGTGACGAGCGATTGGTCGACATTTGGATATGTGGCACAGGGGCTGGCCGGAGTGAAGCCATGGATGCTTTACAAGCCGGAGGATAAGGTGTTTTGGGCGTTACAACAATGGCTAAAGTACAGAACGAGGAACGAGACGACTAACGACTGGCCATGCCGGCAGGCGGTGTCCATGGAGCCATGCCTCCACGTGCCGCCGGTGTGCGATTGCGATGAGATGAAAAGAAGGGATGCAGGGAATGTTTTGCCGTATGTGATTCATTGTGAAGACGCAAGTTGGGGCCTTAAGTTAGGTTGA 1650 47.15 MTHFYLFFLEDRSWFWLRIVQRHGVGKDEDEDDEQFWMPSFDLNHLWRTVSYHGFTNNYPRNNDKFIDGLLPPGFDQKSCLSRYQLNLYKKPSPHYPSFPLLSKLRRYEALHSRCGPNSPSFRRALVSLTSPTNSTSSSEDDCKYLVILTRDGLGNRILALLSAFFYALIANRVILIDQGNILDDLFCEPFLGSSWLLPSDFPLRHKFGSFRQSFPGSFGNILKNGMLKKTIEDSPPPYLYLHLSHDAGDYDKLFYCDRQQNLLKKVPWLIMETNNYLVPGIFLVSSFREELNKLFPVKDTVFHHLGRYLFHPTNDVWGLILRSYKPYFSRANEMVGIQIRIFGSESGSIQDQMNQLLVCTQKKKLLPELEPSSPVKMNSTSHKVKVVLVTSLSAQYSETLKEMYWDHPTVDGEVVAVYQPSHEGIQSSDSRMHNRKALAEMYLLSLSDVLVTSDWSTFGYVAQGLAGVKPWMLYKPEDKVFWALQQWLKYRTRNETTNDWPCRQAVSMEPCLHVPPVCDCDEMKRRDAGNVLPYVIHCEDASWGLKLG 549
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 25233045 25236985 - CcPI632755_07g011520.1 Cco07g1152 183805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco07g1152 549 Gene3D - 141 189 - -
Cco07g1152 549 Pfam Xyloglucan fucosyltransferase 55 521 IPR004938 GO:0008107(InterPro)|GO:0016020(InterPro)|GO:0042546(InterPro)
Cco07g1152 549 Gene3D - 322 483 - -
Cco07g1152 549 PANTHER FUCOSYLTRANSFERASE 2-RELATED 60 548 IPR004938 GO:0005794(PANTHER)|GO:0008107(InterPro)|GO:0008417(PANTHER)|GO:0009969(PANTHER)|GO:0016020(InterPro)|GO:0042546(InterPro)
Cco07g1152 549 FunFam Galactoside 2-alpha-L-fucosyltransferase 141 192 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco01g1800 Cco-Chr1:30687078 Cco07g1152 Cco-Chr7:25233045 3.70E-144 dispersed
Cco07g1152 Cco-Chr7:25233045 Cco05g2677 Cco-Chr5:34780307 3.60E-157 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco07g1152 K13681 - csv:101222105 922.539