Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cco07g1185 ATGTTCGCCTTCTCCGTTCTCCTCCTCCTCCTCGTCTTCCTTCTTTTCTTTCATTATCTTTTCAAATTCTCCGCCCCCGCTCGTCGGAAGCTTCCCCTTCCGCCGGGCTCAATGGGATGGCCCTATTTGGGTGAGACCCTCCAACTTTACTCTCAAGATCCCAATGTCTTCTTTGCCTCAAAAAAGAAGAGATATGGTCCAATTTTCAAGTCCCATATATTGGGTTATCCTTGTGTGATGGTTTCTAGTCCTGAAGCTGCTAAGTTTGTGTTGGTCACTAAAGCGCATCTCTTTAAGCCTACATTTCCAGCTAGTAAAGAGAGGATGTTGGGCAAAAATGCTATCTTCTTTCATCAAGGAGATTACCATGCTAAATTGAGGCGCCTCGTCCTCCGAACTTTCATGCCCGAGGCAATTAGAAACATCGTCCCCAGCATCGAATCCATTGCTAAAAACACTGTTCAATCATGGGATGGACAATTGATCAACACCTTTCAAGAAATGAAGATGTTCGCATTCGAGGTTTCGTTACTTTCGATATTCGGAAAAGACGAAGCTCTTTACTTCGAAGACCTCAAACGATGCTACTACATTCTCGAAAAAGGCTACAATTCGATGCCGATTAACCTACCCGGAACACTCTTCCACAAGGCCATGAAAGCAAGGAAAGAGCTAGCACATATCTTAAACAAGATCCTGTCAACCAGGAGGGAAATGAAGCGCGACCACAACGACCTCCTCGGATCTTTCATGGGTGAAAAGGAAGGCCTCACCGATGAACAGATTGCCGATAACGTCATCGGTCTCATCTTCGCTGCTCGGGACACGACCGCCAGTGTTCTAACATGGATCTTGAAGTACCTAGGAGAAAACCCAAGTGTTCTTCAAGCTGTCACTGCTGAACAAGAAGCAATAATGAAACAAAAACAGAGTGGTGATGATAATCTCACCTGGGCTGACACCAAAAACATGCCAATCACTTCAAGGGTTATTCAGGAAACCCTAAGAATGGCTTCGGTTCTATCATTTACTTTCAGAGAAGCAGTGGAAGATGTTGAATTTGATGGATATTTGATTCCAAAAGGATGGAAAGTTTTGCCTCTTTTCAGAAACATTCATCACAGCCCAGAAAATTTCCCTCAGCCTGACAAATTTGATCCTACAAGATTTGAGGTTGCTCAAAAACCCAATACCTACATGCCATTTGGCAATGGGACCCACTCTTGTCCAGGAAATGAATTAGCCAAGCTAGAGATGCTGGTTTTACTCCATCATTTAACCACCAAGTACAGGTGGAATGTAGTTGGCGCACAAGAAGGGATTCAATATGGTCCTTTTGCCCTTCCTCTCAATGGCCTTCCAATAAAAATATTTCTCAAGAAGTAA 1386 43.87 MFAFSVLLLLLVFLLFFHYLFKFSAPARRKLPLPPGSMGWPYLGETLQLYSQDPNVFFASKKKRYGPIFKSHILGYPCVMVSSPEAAKFVLVTKAHLFKPTFPASKERMLGKNAIFFHQGDYHAKLRRLVLRTFMPEAIRNIVPSIESIAKNTVQSWDGQLINTFQEMKMFAFEVSLLSIFGKDEALYFEDLKRCYYILEKGYNSMPINLPGTLFHKAMKARKELAHILNKILSTRREMKRDHNDLLGSFMGEKEGLTDEQIADNVIGLIFAARDTTASVLTWILKYLGENPSVLQAVTAEQEAIMKQKQSGDDNLTWADTKNMPITSRVIQETLRMASVLSFTFREAVEDVEFDGYLIPKGWKVLPLFRNIHHSPENFPQPDKFDPTRFEVAQKPNTYMPFGNGTHSCPGNELAKLEMLVLLHHLTTKYRWNVVGAQEGIQYGPFALPLNGLPIKIFLKK 461
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 25711183 25713406 + CcPI632755_07g011850.1 Cco07g1185 183838
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cco07g1185 461 Gene3D Cytochrome P450 24 458 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco07g1185 461 SUPERFAMILY Cytochrome P450 28 457 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco07g1185 461 CDD CYP90-like 63 458 - -
Cco07g1185 461 Pfam Cytochrome P450 34 435 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco07g1185 461 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 402 411 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cco07g1185 461 PRINTS P450 superfamily signature 409 420 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco07g1185 461 PRINTS P450 superfamily signature 329 340 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco07g1185 461 PRINTS P450 superfamily signature 400 409 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco07g1185 461 PRINTS P450 superfamily signature 272 289 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco07g1185 461 FunFam Abscisic acid 8 24 459 - -
Cco07g1185 461 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco07g1185 461 PRINTS E-class P450 group I signature 399 409 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco07g1185 461 PRINTS E-class P450 group I signature 281 307 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco07g1185 461 PRINTS E-class P450 group I signature 328 346 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco07g1185 461 PRINTS E-class P450 group I signature 409 432 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco07g1185 461 PRINTS E-class P450 group I signature 368 392 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco07g1185 461 PRINTS E-class P450 group I signature 261 278 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco07g1185 461 PANTHER CYTOCHROME P450 26 32 430 - GO:0004497(PANTHER)|GO:0009687(PANTHER)|GO:0010295(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)|GO:0016709(PANTHER)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco03g0136 Cco-Chr3:1319383 Cco07g1185 Cco-Chr7:25711183 3.00E-153 dispersed
Cco07g1185 Cco-Chr7:25711183 Cco08g1779 Cco-Chr8:28899018 2.00E-153 dispersed
Cco07g1185 Cco-Chr7:25711183 Cco05g2251 Cco-Chr5:31238407 3.20E-159 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco07g1185 K09843 - csv:101212508 871.307