Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco07g1201 ATGGCCGGCGGCCAGTCCCGTAAGTGGCTGGTTCTAGTAGCGACCATATGGATTCAGGCATTCACAGGCACGAACTTCGATTTCTCGGCTTACTCTTCCAGATTGAAATCGGTTTTAGCCATTTCTCAGGTTCAGCTTAATTACCTCGCCACCGCCTCCGATCTCGGCAAAGTCTTCGGCTGGTCCTCTGGCTTGGCTCTGCTTCACCTGCCTTTGCCGCTCGTTCTCTTCATCGCCGCTTTTCTGGGACTCATCGGCTACGGCTTCCAATGGCTTCTAATCGCTGATTTCATCTCCTTCCCCTATTTCCTGGTGTTCTTCTTGTGTTTGCTTGCCGGTTGTAGCATTTGTTGGTTCAACACAGTTTGTTTCGTCCTTTGCATTAGAAATTTCTCTGCAAATCGGCCATTGGCGTTATCTCTCACTGTCAGCTTCAATGGCGTCAGTGCAGCTTTCTACACCCTCGCCGGCAACGCCATTAATCCCTCTTCCCCTCCCATTTACCTCCTCCTCAATGCTCTCGTTCCCCTTCTCACCTCCATCGCCGCCTTCCTCCCCGTCCTCCACCAACCGCCACTTCACTCTCTTTCTCTCTCCTCCCACGCCGTCCACCGAGACTCTCTCATTTTTCTCATCTTGAATTTCCTCGCCGTCGCCGTTGGAATCTACCTTCTCCTCTTTGGCTCTGTCACTTCCGCTGATCCCATGATCGCAAGACTCCTCTTCATCGGAGCCATCGTTCTTCTTATCTTGCCTCTCTGTATTCCCGGTGTTGTTTACGCTAATGATTGGTTCCATCGAACCGTTAATTCCAGCTTCAGTCTCGACGGATCTAATTTCATTCTCGTCCACGACGAAGATCTCGAGTTTCACAAAGAGTTGCTCCTCACTCGCGAAACGAGTGGAAGCTTAGGCAATGGCGCATCTCGGTTGTTGTCCGAATCTACTTTGCTAATTGACGGTGAGATTGAATCATCGAAAGGCTGTTTTCGGAAATTGATTGAGATAGATCAATTAGCGATGCTTGGGGAAGAGCATTCGTCGAGTAGATTGGTGAAACGCCTGGATTTTTGGCTGTATTTTATCGCTTACATTTGTGGAGGCACAATCGGTCTCGTTTACAGCAATAACATTGGTCAGATTGCACAATCGCTAGGGCTGAGTTCAAAAACCACAGCGATTGTAACACTCTACTCCTCCTTCTCCTTCTTCGGCCGATTGCTCTCCGCCGTACCGGACTACATTCGAGCGAAATTGTATTTCGCAAGAACAGGATGGCTTTCGATTGCCCTAATTCCAACTCCCATAGCATTCTTCCTGCTATCGGCGTCATCGAGTGCGTTGGCAGTGTACATAGGCACGGCGTTGATCGGTTTGAGCTCGGGATTCATATTCGCAGCGGCAGTTTCTATTACCGCGGAGCTGTTCGGGCCAAATAGCTTAGGCGTTAACCACAACATTTTGATCACAAACATTCCGATCGGATCTCTGCTGTACGGGATGTTTGCAGCGGTGGTGTACGATTCGCAGGGAAGAAGCTCCGGCGATGGGGAGGCAGTTGTGTGCATGGGAAGAAGGTGCTATTTCTTAACATTTGTATTCTGTGGATGCGTTTCTGTTATGGGATTGGTTTCGAGTGTGTTACTGTTCTTGAGAACAAGACATGCGTATGACCACTTTGAAAGTAGTAGGATTTCTAGTAGTTCAAATCGATTGTATTGA 1722 48.9 MAGGQSRKWLVLVATIWIQAFTGTNFDFSAYSSRLKSVLAISQVQLNYLATASDLGKVFGWSSGLALLHLPLPLVLFIAAFLGLIGYGFQWLLIADFISFPYFLVFFLCLLAGCSICWFNTVCFVLCIRNFSANRPLALSLTVSFNGVSAAFYTLAGNAINPSSPPIYLLLNALVPLLTSIAAFLPVLHQPPLHSLSLSSHAVHRDSLIFLILNFLAVAVGIYLLLFGSVTSADPMIARLLFIGAIVLLILPLCIPGVVYANDWFHRTVNSSFSLDGSNFILVHDEDLEFHKELLLTRETSGSLGNGASRLLSESTLLIDGEIESSKGCFRKLIEIDQLAMLGEEHSSSRLVKRLDFWLYFIAYICGGTIGLVYSNNIGQIAQSLGLSSKTTAIVTLYSSFSFFGRLLSAVPDYIRAKLYFARTGWLSIALIPTPIAFFLLSASSSALAVYIGTALIGLSSGFIFAAAVSITAELFGPNSLGVNHNILITNIPIGSLLYGMFAAVVYDSQGRSSGDGEAVVCMGRRCYFLTFVFCGCVSVMGLVSSVLLFLRTRHAYDHFESSRISSSSNRLY 573
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 25880517 25887642 + CcPI632755_07g012010.1 Cco07g1201 183854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco07g1201 573 Gene3D MFS general substrate transporter like domains 349 561 IPR036259 -
Cco07g1201 573 SUPERFAMILY MFS general substrate transporter 344 555 IPR036259 -
Cco07g1201 573 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 7 559 - GO:0016020(PANTHER)
Cco07g1201 573 Pfam Nodulin-like 8 256 IPR010658 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco06g0062 Cco-Chr6:579238 Cco07g1201 Cco-Chr7:25880517 1.40E-173 dispersed
Cco07g1201 Cco-Chr7:25880517 Cco02g1280 Cco-Chr2:24409518 3.50E-70 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco07g1201 - - - 0.0