Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco07g1286 ATGGCAGAGGAGAAGATAGGGGAAGAAAGCAACAAAAATTTGAGGGGAAGAAAGTCTTCATGGCCAACCCTCCGCCGTGTAGACTCACTCAATTTGGAGGCCGGACGGATTCCGGCCATCGCAGCTCGTCAACTCTCCAGCGTAAATTGGCGGCGAACATTAAGCTTGGCATTTCAGAGCGTGGGAGTGGTGTACGGCGACATCGGGACATCGCCGTTGTACGTGTTTGCAAGCACGTTCAGCAACGGGACGATCGAGGACACAGACGATGTGATCGGAGTTCTATCACTCATAATCTACACAATAGCACTGGTTCCATTGTTGAAGTATGTTTTCATTGTGCTGTGGGCAAATGACAATGGCGATGGGGGGACATTTGCCCTTTACTCGTTGTTGTGCCGCTACGTGAAAGTGGGGTTGATTCCGAATGAACAGCCAGAGGACATGGAACTCTCAAATTATCAGCTCCTTATGCCTTCCAATTTGAGAAGATCTCAGAAAGTGAAAGAGAAGCTTGAGAATAGTATGTTTGCAAAAGTTGCCCTTTTTCTTGTCACTATTGCTGGGACTTCCATGGTTATTGGAGATGGAGTTCTCACTCCATCTATCTCGGTTCTCTCAGCAGTGAGCGGAATCAAATCACTAGGAACAGATGCGGTTGTGGGGGTTTCAGTAGCTATTCTTGTAATTTTGTTCTGCATTCAACGATTTGGAACTGACAAAGTTGGATTCTCATTTGCCCCAATAATATTTATTTGGTTTGCATTTATTGGTGGCATTGGCCTCTTCAACTTGTTCAAGCATGACCCTGCTGTTCTCAAAGCTTTTAACCCTAAATATATCTTTGATTACTTCAAAAGAAATGGCAAACAAGCTTGGGTTTCCCTTGGTGGAGTTTTTCTTTGCATCACAGGGACTGAGGCCATGTTTGCTGATTTGGGTCACTTCAATGTTAGAGCCATCCAGATTAGTTTCTCTTCTATTGTATTCCCTGCTTTATTAGCAGCCTACAGTGGGCAAGCTGCATATCTAAGAAAATTCCCAGATCATGTTGGCAATACTTTCTATGACTCAATTCCAGATCCTTTGTACTGGCCAATGTTCGTAGTTGCAGTGGCAGCCTCCATCATAGCAAGCCAAGCAATGATCTCAGGAGCATTTGCCATAATATCACAATCCTTGTCTTTAGGTTGCTTCCCAAGAGTAAAAGTTATCCACACTTCACCCAAATACGAAGGCCAAGTTTACATCCCAGAGATCAATTACCTTCTAATGTTGGCGTGTGTGATCGTAACTGCGGCCTTCAGAACCACGGAGAACATCGGTCACGCCTACGGCATTGCGGTCGTGTCCGTCATGATCATGACCACCGCCATGGTTTCTCTCATCATGGTGGTTATTTGGAAGACCAGTATTTGGTTGATAGTTTGTTTCATTCTGGTGTTTGGCTCTATTGAACTTCTCTATTTCTCGTCTGTTCTTTACAAGTTCACTCAAGGCGGGTTTCTTCCTCTTATTCTTGCTCTTTTTCTCATGGCTGTCATGATTGTTTGGCACTATGTTCATAGGGAAAGATACATTTTTGAACTCAAAAATAAGGTCTCTAGTGGCTACATAACCGAGCTAGCTAATAATCCTGATGTTAACCGAATTCCTGGAATTGGTCTTCTTTACTCTGAGTTGGTTCAAGGTATTCCTCCCATTTTTCCTCACTTCATTTCTAGTGTTCCTTCTGTTCACTCCGTCATCGTCTTCGTCTCCATCAAGTCCATTCCCATCAGCAAAGTCGCACCCGACGAGCGGTTTTTGTTCCGCCATGTCGAGCCCAGGGAGTACCGTATGTTTCGATGTGTCGTCAGATATGGATACAAAGACATAGTCACCGGATCTGCTGAGTTTGAGCGGCAGTTGGTGGAGAGCTTGAAAGAATTCATAAGCCAAGAACATGTAATGCGGGAAGGTGTTCCAATAGAGCCACCAGCTTCAGCCAAAATTGAACCAACAAAAAAAGTAAAACCTTCTTCTTCTTCTTCTTCAGTAGCAACAGTGCATGTGGAAGGTGCGACGACAATATCCGTGGAAATGGGAAACCAGTCATCTCGACGCTCGTCAGGGTCCATTCAGCCGGTCGGCGGTTCGAAATCGAGGGGGTCGGATCATCAAGTACTAGGAGTGGCTGCAGTGGAAGAAGAGATGGGATTTATAGAGAAAGCAAAGAAGAAAGGGGTGGTTTATTTGTTGGGAGAAGCAGAGGTAGTGGCTGAACCAAAATCCTCATTGTTTAAGAAGATAGTGGTTAATTATGCTTATAGTTTCTTGAGGAAGAACTTTAGGCAAGGGGAAAATATTCTTGAGATTCCACGTACAAGGCTTTTAAGGGTTGGAATGACTTATGAAATATGA 2403 44.36 MAEEKIGEESNKNLRGRKSSWPTLRRVDSLNLEAGRIPAIAARQLSSVNWRRTLSLAFQSVGVVYGDIGTSPLYVFASTFSNGTIEDTDDVIGVLSLIIYTIALVPLLKYVFIVLWANDNGDGGTFALYSLLCRYVKVGLIPNEQPEDMELSNYQLLMPSNLRRSQKVKEKLENSMFAKVALFLVTIAGTSMVIGDGVLTPSISVLSAVSGIKSLGTDAVVGVSVAILVILFCIQRFGTDKVGFSFAPIIFIWFAFIGGIGLFNLFKHDPAVLKAFNPKYIFDYFKRNGKQAWVSLGGVFLCITGTEAMFADLGHFNVRAIQISFSSIVFPALLAAYSGQAAYLRKFPDHVGNTFYDSIPDPLYWPMFVVAVAASIIASQAMISGAFAIISQSLSLGCFPRVKVIHTSPKYEGQVYIPEINYLLMLACVIVTAAFRTTENIGHAYGIAVVSVMIMTTAMVSLIMVVIWKTSIWLIVCFILVFGSIELLYFSSVLYKFTQGGFLPLILALFLMAVMIVWHYVHRERYIFELKNKVSSGYITELANNPDVNRIPGIGLLYSELVQGIPPIFPHFISSVPSVHSVIVFVSIKSIPISKVAPDERFLFRHVEPREYRMFRCVVRYGYKDIVTGSAEFERQLVESLKEFISQEHVMREGVPIEPPASAKIEPTKKVKPSSSSSSVATVHVEGATTISVEMGNQSSRRSSGSIQPVGGSKSRGSDHQVLGVAAVEEEMGFIEKAKKKGVVYLLGEAEVVAEPKSSLFKKIVVNYAYSFLRKNFRQGENILEIPRTRLLRVGMTYEI 800
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 26942717 26952412 + CcPI632755_07g012860.1 Cco07g1286 183939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco07g1286 800 MobiDBLite consensus disorder prediction 659 718 - -
Cco07g1286 800 MobiDBLite consensus disorder prediction 669 715 - -
Cco07g1286 800 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 37 800 IPR003855 GO:0006813(PANTHER)|GO:0015079(PANTHER)|GO:0015079(InterPro)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cco07g1286 800 Pfam K+ potassium transporter integral membrane domain 56 536 IPR053951 -
Cco07g1286 800 NCBIfam potassium uptake protein 56 800 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cco07g1286 800 Pfam K+ potassium transporter C-terminal domain 552 800 IPR053952 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco07g1286 Cco-Chr7:26942717 Cco09g0585 Cco-Chr9:5144988 3.20E-223 dispersed
Cco07g1286 Cco-Chr7:26942717 Cco10g1041 Cco-Chr10:22463363 7.70E-225 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco07g1286 K03549 - csv:101205628 1334.7