Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco07g1383 | ATGGATTTCTGGCCGGAATTTCTCGCTAGCAGTTGGGGAAAAGAGTTCGTCGCCGGTGGAATCGGCGGTGTCGCCGGCATCGTCTCCGGCTACCCACTCGACACCCTTCGCATCCGTCAACAACACTCCACCTCCGGCTCCGCCATCAGCGTCCTCCGTAACATCATGTCCAACGGCGGCCCGGCCGCCCTCTACAGAGGAATGGGAGCTCCACTCGCTTCCGTCACTTTCCAGAACGCCATTGTTTTCCAGACCAACGCCGTGCTCTGCAGAGCGTTCGATCCAGCGGCGACAGACAACCGTCCACCGTCGTACAAGGCGGTAGCATTAGGCGGATTCGGCACCGGAGCATTACAGAGCCTAATTTTAACACCGGTGGAGCTCGTGAAAATCCGTCTTCAATTACAGGACTTGGGTTCATCAAATCACACAGATCTGAGTTCATCTCGGCTCGGGCCGATGCAGGTTGCGAAGAACATTTTCAAAACCGAAGGCTACAAAGGGCTATACAGAGGCTTAACAATCACAATGCTAAGAGACGCTCCTTCCCATTGCTTTTACTTTTGGACTTACGAATTCATGAGAGAAAAGCTTCATCCCGGTTGTAGAAAATCCGGGCAAGAGACGTTGAGAACGATGCTGGTAGCCGGAGGACTCGCCGGCGTCGCCAGTTGGGTTTGTTGTTACCCATTGGATGTAGTTAAAACCAGACTTCAAGCTCAATCGAAATTCACGTTTCAAAAGTACAGTGGAATTGTGGATTGTTTCTACAAGAGCGTGAAAGAAGAAGGGTACAGTGTTTTATGGCGTGGATTAGGAACCGCCATAGCTAGAGCTTTTGTGGTGAATGGAGCCATTTTTTCTGCTTATGAACTCAGTTTGAGATGTCTATCCAACAATGGAGGATTTCACGCTGAAAATACCATTTGA | 930 | 50.43 | MDFWPEFLASSWGKEFVAGGIGGVAGIVSGYPLDTLRIRQQHSTSGSAISVLRNIMSNGGPAALYRGMGAPLASVTFQNAIVFQTNAVLCRAFDPAATDNRPPSYKAVALGGFGTGALQSLILTPVELVKIRLQLQDLGSSNHTDLSSSRLGPMQVAKNIFKTEGYKGLYRGLTITMLRDAPSHCFYFWTYEFMREKLHPGCRKSGQETLRTMLVAGGLAGVASWVCCYPLDVVKTRLQAQSKFTFQKYSGIVDCFYKSVKEEGYSVLWRGLGTAIARAFVVNGAIFSAYELSLRCLSNNGGFHAENTI | 309 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 27937686 | 27938768 | + | CcPI632755_07g013830.1 | Cco07g1383 | 184036 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco07g1383 | 309 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 103 | 197 | IPR018108 | - | |
Cco07g1383 | 309 | SUPERFAMILY | Mitochondrial carrier | 11 | 291 | IPR023395 | - | |
Cco07g1383 | 309 | Gene3D | Mitochondrial carrier domain | 9 | 304 | IPR023395 | - | |
Cco07g1383 | 309 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 10 | 92 | IPR018108 | - | |
Cco07g1383 | 309 | PANTHER | MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED | 8 | 298 | IPR050567 | GO:0006810(PANTHER)|GO:0022857(PANTHER) | |
Cco07g1383 | 309 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 208 | 296 | IPR018108 | - | |
Cco07g1383 | 309 | PRINTS | Mitochondrial carrier protein signature | 170 | 188 | IPR002067 | GO:0055085(InterPro) | |
Cco07g1383 | 309 | PRINTS | Mitochondrial carrier protein signature | 15 | 28 | IPR002067 | GO:0055085(InterPro) | |
Cco07g1383 | 309 | PRINTS | Mitochondrial carrier protein signature | 118 | 136 | IPR002067 | GO:0055085(InterPro) | |
Cco07g1383 | 309 | PRINTS | Mitochondrial carrier protein signature | 217 | 239 | IPR002067 | GO:0055085(InterPro) | |
Cco07g1383 | 309 | Pfam | Mitochondrial carrier protein | 109 | 198 | IPR018108 | - | |
Cco07g1383 | 309 | Pfam | Mitochondrial carrier protein | 211 | 299 | IPR018108 | - | |
Cco07g1383 | 309 | Pfam | Mitochondrial carrier protein | 11 | 87 | IPR018108 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco07g1383 | Cco-Chr7:27937686 | Cco09g1228 | Cco-Chr9:12497437 | 8.50E-47 | dispersed | |
Cco10g2213 | Cco-Chr10:35174602 | Cco07g1383 | Cco-Chr7:27937686 | 3.80E-26 | transposed | |
Cco07g1383 | Cco-Chr7:27937686 | Cco09g0206 | Cco-Chr9:1835234 | 5.60E-123 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco07g1383 | K15109 | - | csv:101222749 | 602.823 |