Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cco07g1443 | ATGGATTGTTTGTGGATATTTGTGCAGCTCATCACAGCTGCAGCTTTGATATCTTCCACAATCATAATCCTGAAAAGCTTCATCATCCCCACCACAGCACCACCATCATCATCTTCAAACTCCCTCTCCTCCAACAATAACCCTTCACTTCCTTCTGGTTCCCTCGGTCTCCCCTTCGTCGGTGAAACCCTCCACTTCGTCTCTTCCGCTTACTCTCACCGCCCCGACACCTTCATGGACACACGTCGCCAACGGTATGGAAAGGTTTTCAAATCACATATATTTGGAAGTCCAACAATAGTTTCAACTGATGCTGAAGTGAATAGGTTTATTCTACAAAGTGATGCAAAGGTTTTTGTACCATCTTATCCAAAATCTGTGACAGAGTTGATGGGAAAATCTTCTATATTGCTCATTAATGGCAGTTTGCATAGAAGAATTCATGGCCTTATTGGAGCATTTTTCAAGTCATCTCATCTCAAAGCTCAAGTAACCATAGACATGCAGAAATATCTTCAAAAATCCATCTCTACTTGGACTAATACTTATCAACACAATCCTATCCACATACAAGATGAAGCCAAAAATATTGCCTTTGAAATACTAGTAAAGACACTGATCAGTTTGGAAGCTGGTGAAGAAATGGAATTTCTCAAGAAACAGTTTAATGAATTCATTGCTGGGATTATGGCTTTCCCAATAAACATCCCAGGAAGCAGACTTTACCGATCATTACAGGCGAAAAGGAAAATGGTTAAGTTAGTGAAAGAAATAATAGAAGGAAGAAGAAAGAAGATGGATGAGAAATTGAATAAGGCAGTCCCAATGAATGATGTTGTGGATGTTTTGGTGAATGATGGAAGCCAACAAGTTACAAATGAACTAATAGCAGATAATATGATTGATATGATGATTCCAGGCCAAGATTCTGTCCCAATTCTTATCACTTTGGCTATTAAATACCTTTCAGATTCCCCATCTGCCCTTCAACAATTAGTGGAAGAAAACATGGAATTGAAAAGATTGAAAACTCAGGTTGGAGAGGCATTGAAGTGGAGTGATTACTTGTCTTTACCATTTACACAAAATGTCATAACAGAGACGTTAAGGATAGGAAACATAATAACAGGAGTGATGAGAAAGGCGATGAAAGACATTGAGATAAAAGGGTATTTAATACCTAAAGGATGGTGTGTCCTTGCATATATTAGGTCAGTTCATGTCGATGAAAACCACTTCCAAACCCCTTACCATTTCAATCCATGGAGATGGCAAGATAAAGACTCAAACAACTCCAATTTTACTCCTTTTGGAGGAGGACAAAGGTTGTGCCCTGGACTTGAATTAGCCCGACTAGAAGCTTCAATTTTCTTACATCACTTCGTTACTGAATTCAGGTGGGTGGCTGAGGAAGACAATATTATCAACTTCCCAACAGTAAGGATGAAGAACAAAATGACAATTTGGGTCAAGAAGAGAGAGCATTAA | 1488 | 38.91 | MDCLWIFVQLITAAALISSTIIILKSFIIPTTAPPSSSSNSLSSNNNPSLPSGSLGLPFVGETLHFVSSAYSHRPDTFMDTRRQRYGKVFKSHIFGSPTIVSTDAEVNRFILQSDAKVFVPSYPKSVTELMGKSSILLINGSLHRRIHGLIGAFFKSSHLKAQVTIDMQKYLQKSISTWTNTYQHNPIHIQDEAKNIAFEILVKTLISLEAGEEMEFLKKQFNEFIAGIMAFPINIPGSRLYRSLQAKRKMVKLVKEIIEGRRKKMDEKLNKAVPMNDVVDVLVNDGSQQVTNELIADNMIDMMIPGQDSVPILITLAIKYLSDSPSALQQLVEENMELKRLKTQVGEALKWSDYLSLPFTQNVITETLRIGNIITGVMRKAMKDIEIKGYLIPKGWCVLAYIRSVHVDENHFQTPYHFNPWRWQDKDSNNSNFTPFGGGQRLCPGLELARLEASIFLHHFVTEFRWVAEEDNIINFPTVRMKNKMTIWVKKREH | 495 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 28529488 | 28535264 | - | CcPI632755_07g014430.1 | Cco07g1443 | 184096 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cco07g1443 | 495 | PRINTS | E-class P450 group I signature | 402 | 426 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco07g1443 | 495 | PRINTS | E-class P450 group I signature | 444 | 467 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco07g1443 | 495 | PRINTS | E-class P450 group I signature | 83 | 102 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco07g1443 | 495 | PRINTS | E-class P450 group I signature | 362 | 380 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco07g1443 | 495 | PRINTS | E-class P450 group I signature | 434 | 444 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco07g1443 | 495 | SUPERFAMILY | Cytochrome P450 | 47 | 493 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco07g1443 | 495 | PANTHER | CYTOCHROME P450 26 | 49 | 465 | - | GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER)|GO:0016709(PANTHER) | |
| Cco07g1443 | 495 | FunFam | 3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1 | 40 | 493 | - | - | |
| Cco07g1443 | 495 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 437 | 446 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cco07g1443 | 495 | Gene3D | Cytochrome P450 | 40 | 493 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco07g1443 | 495 | Pfam | Cytochrome P450 | 51 | 473 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cco07g1443 | 495 | CDD | CYP90-like | 82 | 488 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cco04g1757 | Cco-Chr4:32550764 | Cco07g1443 | Cco-Chr7:28529488 | 7.10E-131 | dispersed | |
| Cco07g0983 | Cco-Chr7:22659311 | Cco07g1443 | Cco-Chr7:28529488 | 5.40E-88 | dispersed | |
| Cco07g1443 | Cco-Chr7:28529488 | Cco11g0504 | Cco-Chr11:5313500 | 2.10E-79 | dispersed | |
| Cco06g0158 | Cco-Chr6:1634730 | Cco07g1443 | Cco-Chr7:28529488 | 2.00E-60 | transposed | |
| Cco07g0422 | Cco-Chr7:4711829 | Cco07g1443 | Cco-Chr7:28529488 | 1.00E-99 | transposed | |
| Cco09g2150 | Cco-Chr9:35890580 | Cco07g1443 | Cco-Chr7:28529488 | 1.30E-58 | transposed | |
| Cco07g1443 | Cco-Chr7:28529488 | Cco09g0055 | Cco-Chr9:478274 | 8.50E-190 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cco07g1443 | K12638 | - | csv:101212581 | 827.009 |