Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco07g1527 ATGGAGCCGTCTCTTGAACTTTCAGAAACGCCTGAGCAGATTATTCTACGATGGGACTCGGCCGCACCGGAGGAGGTGAAGGATAAGATGATTTTTGACTCTGACAGGGAAGAGATCGACCGTTATTTGCAGGCTGTTGATGAAATCCAGAGGTCTATGTCGTCCGCTACCATTTCGGACGATCAGAACAAAGTCGATTCCACTATGCAGATCGCCATGGCTAGGCTTGAGGATGAGTTCCGTCACATTCTTTCCAGTCATACCACTCCGATCGAGGTCGAGTCGCTTACTGATCCGAGTCCATCTTCTCGCTCCATGTCCACTAGTGGGAGTGGTGTGTTCGAGGATGAAAACGATGAGGAACCGGAGTTACAGGAAGTTCAGCTCGATTTAACTGGCAGTCCAAGTTTTGGGTCCAGCGGTCGATCGAGCTACCGGGCGACCAGCAGTATTCGTGAAATTGATCTGATACCTTCGGATGCGGTTATCGATCTACGAAGTATTGCTGAACGGATGATATCGGCGGGGTACCTGCGGGAGTGCATCCAAGTTTATGGCAGTGTGCGAAAGTCCACCTTCGACTCCAGCTTCCGACGGCTCGGAATTGAGAAACTGAGCATTGGAGATATCCAGAGGCTGGATTGGAATGAGCTGGAGACGAAGATCAGAAGGTGGATTAGAGCAGCAAAGGTGTCTATTAGGACTTTGTTTTCCAGCGAGAAGAAACTCTGCGAGCAAATTTTTTATGGCATAGGGACCGCCATAGACGATGCTTGTTTCATGGAGACTGTAAAAGGTCCTGTGACTCAGTTGTTCAATTTCGCCGAAGCAATCAGTATAAGCCGCAGATCGCCGGAGAAGCTGTTCAAGATTCTGGACCTCCACGATGCCTTCACGGAGTTGATACCTGACATTGATATAATATTCGAATCAAAATCTGCGGAGTATATCCGAATTCAGGCGGCGGAGATATTGTCGCGGCTGGCGGAGGCCGTCAGAGGGACTTTATCGGAGTTTGAAAATGCGGTGCTGCGGGAGCCGTCGACGCATCCGGTTCCCGGCGGAACTCTTCATCCGTTGACAAGGTACGTAATGAACTATGTGAGTCTGATTTCGGACTACAAAGTGACGTTAGACGAGCTCATCGTGTCCAAACCATCGACGGGCTCGAGGTATTCGGCCGACCCCACAACCCCAGATATGGACTTTGGTGAGCTAGAGGGCAAAACGCCATTAGCGCTCCATCTTATATGGAGCATCGTGATTCTGCAGTTCAATTTGGAGGGGAAATCCAGGCACTACAAAGACCCTTCTCTAGCTCATCTCTTCATCATGAACAACGTTCATTACATCGTTCAGAAGATAAAAGGATCCCCAGAGTTGCGAGAAATGATCGGAGACGTTTATCTAAAAAGGCTGACCGGGAAGTTTCGACAGGCGGCCACAAACTACGAGAGAACAACGTGGGTGAATGTGCTGTATTGCCTGCGAAACGAAGGGTTGAATGTGGGCGGGAGCTTGTCTTCCGGACCCGCAAAGAGTCTTATTAGAGATAGATTCAAGACTTTCAACGCCATGTTTGAGGAGGTTCACAGGACACAATCAGCATGGTTGATACCAGATTCTCAGCTGAGGGAGGAGCTGCGCATATCCATAACTGAGAAGTTGATTCCAGCTTACAGGTCGTTTCTTGGCCTCCATGGCCACCACATAGAGAGTGGAAAACACCCCGAAAATTACATCAAGTACTCCGTCGAGGAACTGGAAAATGCCATCTTGGATTTCTTTGAGGGTTGCTCGGCAACCCATAACTTGAGAAGGAGATCTCACTGA 1833 49.26 MEPSLELSETPEQIILRWDSAAPEEVKDKMIFDSDREEIDRYLQAVDEIQRSMSSATISDDQNKVDSTMQIAMARLEDEFRHILSSHTTPIEVESLTDPSPSSRSMSTSGSGVFEDENDEEPELQEVQLDLTGSPSFGSSGRSSYRATSSIREIDLIPSDAVIDLRSIAERMISAGYLRECIQVYGSVRKSTFDSSFRRLGIEKLSIGDIQRLDWNELETKIRRWIRAAKVSIRTLFSSEKKLCEQIFYGIGTAIDDACFMETVKGPVTQLFNFAEAISISRRSPEKLFKILDLHDAFTELIPDIDIIFESKSAEYIRIQAAEILSRLAEAVRGTLSEFENAVLREPSTHPVPGGTLHPLTRYVMNYVSLISDYKVTLDELIVSKPSTGSRYSADPTTPDMDFGELEGKTPLALHLIWSIVILQFNLEGKSRHYKDPSLAHLFIMNNVHYIVQKIKGSPELREMIGDVYLKRLTGKFRQAATNYERTTWVNVLYCLRNEGLNVGGSLSSGPAKSLIRDRFKTFNAMFEEVHRTQSAWLIPDSQLREELRISITEKLIPAYRSFLGLHGHHIESGKHPENYIKYSVEELENAILDFFEGCSATHNLRRRSH 610
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 29318019 29319851 + CcPI632755_07g015270.1 Cco07g1527 184180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco07g1527 610 Pfam Exocyst complex component Exo70 N-terminal 12 85 - -
Cco07g1527 610 SUPERFAMILY Cullin repeat-like 11 597 IPR016159 -
Cco07g1527 610 PANTHER EXOCYST COMPLEX PROTEIN EXO70 11 598 IPR004140 GO:0000145(PANTHER)|GO:0000145(InterPro)|GO:0006887(InterPro)|GO:0006887(PANTHER)
Cco07g1527 610 MobiDBLite consensus disorder prediction 87 123 - -
Cco07g1527 610 Gene3D Exocyst complex component Exo70 14 606 - -
Cco07g1527 610 MobiDBLite consensus disorder prediction 88 113 - -
Cco07g1527 610 Pfam Exo70 exocyst complex subunit C-terminal 224 594 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco03g1393 Cco-Chr3:27829460 Cco07g1527 Cco-Chr7:29318019 5.10E-121 dispersed
Cco05g2453 Cco-Chr5:32970871 Cco07g1527 Cco-Chr7:29318019 9.40E-104 dispersed
Cco07g1527 Cco-Chr7:29318019 Cco07g1710 Cco-Chr7:31087317 9.70E-103 dispersed
Cco07g1527 Cco-Chr7:29318019 Cco02g2189 Cco-Chr2:34543628 6.10E-89 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco07g1527 K07195 - csv:101204229 1130.55