Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco07g1615 | ATGGAGAAAAACCCACCCCCAGAAAAGTCTGAAAGTTTTTCTAAAAATTTCAATAGAAGGATTGCTAATTTGGGCTCACCTCGACGGACTCCCGACGCTGCTGCTGCTGCTGCTGCTGATGCTAAATCAGATTCCGAAAAGCTTGCTGCTGATCGAGATGATGATGCCTTCGTTGAAGACCCTCTTTCCGAATCTGATACGGCCTTGATTTTTGAAGAGGTTGATCGATTCCTCGAGACTTTGTCCAATGTTGGAGACGATGGATCGAATCTAATCCATGAAATTCCGAGCTCCATTCATTCGTTGTCGAAAATGGTGGACTCCATGATCTCCAGGTACAATTCTAACAAATACCCGGCGAAGCTTGGCAAAGATCCCGACCGGGATTCTTCCTTTTTTGAAGCTTTAGGTCGCATTTCCAAGATTGCTATTAAATTAAGCGAATTCCCTACCAGCACTGCCTCGATTCCTTCTCTCAATCGAACCACCACGGCTCTACAGCGAGCGATGTCGTTATTGGATGAAGAATTCAATGCCCTTTTGAAAGAATGCAAACATCGAGAGCTAGATTCGAAACCTGACAAGAAAGCATCAAAGCAGTCGTCGTTCAAAACAATCAACGAATCAGCAGATCAACAAAACAGCACCATTCCTGAATCATCCGAGTCCGATTCTGCTAAGGAAGAGATATTCCCCTCTTTCTCGCAGGAAACTATATCAAATATGAAAAGAATTGCCGGAGCAATGATCTCTGCTGGCTACGAGAAGGAATGTTGTATGAGTTACAGCTTCCTCCGGCAGAGCTCGTTCAAAGGAATATTGAACAAGCTAGGGTACGAAAGTATTAGCATAGACGAGATTCAAAAAATGCAATGGGAGACTCTTCAATCAGAAATCGACAAATGGATCGCCGTCGTCAAGAAATGCTCAAAATCTCTGTTTCCAGGCGAGTGGAAGCTTTGTGATTCTGTTTTCACCGATTATCCCTTCATTTCTCATACGCTCTTCAGCAATTTAACAAGAGCAGTAGTCATAAAACTTCTCAACTTCGCAAACGCCGTCGTTTTGACAAAACGATCCGCGGAGAAGATGTTCAAATTACTTGACATGTACGAAACAATCCGAGATTTAATTCCGGTCATCAATGGCTTCCCCGAAAATTGCAGAACAGAGCTAATTTCCGAAGCGGAAGGGGCAAAAAGCGGGATAGGCGAAGCAATAGTCGGCATTTTCTATGACCTAGAGAGCTCAATCAAAAGCGACAACGCGAAAATTCCAGTTCCAGGAGGAGCAGTTCATCCATTGACGCGCTACATAATGAATTACCTAAAATACGCTTGCGAGTACAAAGAAACCCTAGAACAGGTCTTCCAATTTCTCGACCCAAAAGTGGAAGAAGACCGACCCGCAAGAATGGACGAGAACGACGACGCGTCGCCGAGAAAGTCTCAGCTCGCAATTCAGATTGCAATGGTGATGGATCTACTCGACGCGAATCTCACAATGAGATCGAAACTATACCGCGACGCATCTCTTCGGTACATCTTCCTGATGAACAACGGAAGGTACATAGTACAGAAAATCAAAGGCTCAAGCGGAATTACCGAGTTGATGGGCGACCGTTGGTGCCGTAAACGATCGACGAATCTGCGACAATACCACAAAAATTACCAGAGAGAAACATGGAGTAAGGTATTGCAGTGCCTAAGCCACGAAGGATTGCTGGTGAACGGGAAGGTATCGAAGCCAATATTGAAGGAGAGATTCAAAAGCTTCAACGCGATGTTCGACGAAATACACAAAACGCAAAGCAGTTGGGTAGTGAGTGACGAGCAGCTTCAATCGGAGCTTAGGATTTCGGTGTCGGCCGTGATGATTCCGGCGTACCGTTCGTTCGTTGGGAGATTCAAGCAGCATTTCGATCCGGGAAGACAATCGGAGAAGTACATAAAGTATCAACCTGAAGACATTGAAGGTTTGATCGATGACCTGTTTGATGGAAATACTGCTTCCATGGGGAGAAGAAGAGTGTAG | 2034 | 44.99 | MEKNPPPEKSESFSKNFNRRIANLGSPRRTPDAAAAAAADAKSDSEKLAADRDDDAFVEDPLSESDTALIFEEVDRFLETLSNVGDDGSNLIHEIPSSIHSLSKMVDSMISRYNSNKYPAKLGKDPDRDSSFFEALGRISKIAIKLSEFPTSTASIPSLNRTTTALQRAMSLLDEEFNALLKECKHRELDSKPDKKASKQSSFKTINESADQQNSTIPESSESDSAKEEIFPSFSQETISNMKRIAGAMISAGYEKECCMSYSFLRQSSFKGILNKLGYESISIDEIQKMQWETLQSEIDKWIAVVKKCSKSLFPGEWKLCDSVFTDYPFISHTLFSNLTRAVVIKLLNFANAVVLTKRSAEKMFKLLDMYETIRDLIPVINGFPENCRTELISEAEGAKSGIGEAIVGIFYDLESSIKSDNAKIPVPGGAVHPLTRYIMNYLKYACEYKETLEQVFQFLDPKVEEDRPARMDENDDASPRKSQLAIQIAMVMDLLDANLTMRSKLYRDASLRYIFLMNNGRYIVQKIKGSSGITELMGDRWCRKRSTNLRQYHKNYQRETWSKVLQCLSHEGLLVNGKVSKPILKERFKSFNAMFDEIHKTQSSWVVSDEQLQSELRISVSAVMIPAYRSFVGRFKQHFDPGRQSEKYIKYQPEDIEGLIDDLFDGNTASMGRRRV | 677 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 30207753 | 30209786 | - | CcPI632755_07g016150.1 | Cco07g1615 | 184268 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco07g1615 | 677 | MobiDBLite | consensus disorder prediction | 202 | 228 | - | - | |
Cco07g1615 | 677 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
Cco07g1615 | 677 | Pfam | Exocyst complex component Exo70 N-terminal | 104 | 183 | - | - | |
Cco07g1615 | 677 | FunFam | Exocyst subunit Exo70 family protein | 115 | 673 | - | - | |
Cco07g1615 | 677 | SUPERFAMILY | Cullin repeat-like | 121 | 666 | IPR016159 | - | |
Cco07g1615 | 677 | Gene3D | Exocyst complex component Exo70 | 115 | 675 | - | - | |
Cco07g1615 | 677 | MobiDBLite | consensus disorder prediction | 1 | 59 | - | - | |
Cco07g1615 | 677 | Pfam | Exo70 exocyst complex subunit C-terminal | 301 | 663 | IPR046364 | GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro) | |
Cco07g1615 | 677 | PANTHER | EXOCYST COMPLEX PROTEIN EXO70 | 103 | 668 | IPR004140 | GO:0000145(PANTHER)|GO:0000145(InterPro)|GO:0006887(InterPro)|GO:0006887(PANTHER) | |
Cco07g1615 | 677 | MobiDBLite | consensus disorder prediction | 188 | 228 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco01g0910 | Cco-Chr1:10083358 | Cco07g1615 | Cco-Chr7:30207753 | 4.70E-173 | dispersed | |
Cco07g1615 | Cco-Chr7:30207753 | Cco07g1710 | Cco-Chr7:31087317 | 7.60E-72 | dispersed | |
Cco07g1615 | Cco-Chr7:30207753 | Cco03g0205 | Cco-Chr3:2123041 | 5.60E-67 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco07g1615 | K07195 | - | csv:101220402 | 1240.71 |