Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco07g1615 ATGGAGAAAAACCCACCCCCAGAAAAGTCTGAAAGTTTTTCTAAAAATTTCAATAGAAGGATTGCTAATTTGGGCTCACCTCGACGGACTCCCGACGCTGCTGCTGCTGCTGCTGCTGATGCTAAATCAGATTCCGAAAAGCTTGCTGCTGATCGAGATGATGATGCCTTCGTTGAAGACCCTCTTTCCGAATCTGATACGGCCTTGATTTTTGAAGAGGTTGATCGATTCCTCGAGACTTTGTCCAATGTTGGAGACGATGGATCGAATCTAATCCATGAAATTCCGAGCTCCATTCATTCGTTGTCGAAAATGGTGGACTCCATGATCTCCAGGTACAATTCTAACAAATACCCGGCGAAGCTTGGCAAAGATCCCGACCGGGATTCTTCCTTTTTTGAAGCTTTAGGTCGCATTTCCAAGATTGCTATTAAATTAAGCGAATTCCCTACCAGCACTGCCTCGATTCCTTCTCTCAATCGAACCACCACGGCTCTACAGCGAGCGATGTCGTTATTGGATGAAGAATTCAATGCCCTTTTGAAAGAATGCAAACATCGAGAGCTAGATTCGAAACCTGACAAGAAAGCATCAAAGCAGTCGTCGTTCAAAACAATCAACGAATCAGCAGATCAACAAAACAGCACCATTCCTGAATCATCCGAGTCCGATTCTGCTAAGGAAGAGATATTCCCCTCTTTCTCGCAGGAAACTATATCAAATATGAAAAGAATTGCCGGAGCAATGATCTCTGCTGGCTACGAGAAGGAATGTTGTATGAGTTACAGCTTCCTCCGGCAGAGCTCGTTCAAAGGAATATTGAACAAGCTAGGGTACGAAAGTATTAGCATAGACGAGATTCAAAAAATGCAATGGGAGACTCTTCAATCAGAAATCGACAAATGGATCGCCGTCGTCAAGAAATGCTCAAAATCTCTGTTTCCAGGCGAGTGGAAGCTTTGTGATTCTGTTTTCACCGATTATCCCTTCATTTCTCATACGCTCTTCAGCAATTTAACAAGAGCAGTAGTCATAAAACTTCTCAACTTCGCAAACGCCGTCGTTTTGACAAAACGATCCGCGGAGAAGATGTTCAAATTACTTGACATGTACGAAACAATCCGAGATTTAATTCCGGTCATCAATGGCTTCCCCGAAAATTGCAGAACAGAGCTAATTTCCGAAGCGGAAGGGGCAAAAAGCGGGATAGGCGAAGCAATAGTCGGCATTTTCTATGACCTAGAGAGCTCAATCAAAAGCGACAACGCGAAAATTCCAGTTCCAGGAGGAGCAGTTCATCCATTGACGCGCTACATAATGAATTACCTAAAATACGCTTGCGAGTACAAAGAAACCCTAGAACAGGTCTTCCAATTTCTCGACCCAAAAGTGGAAGAAGACCGACCCGCAAGAATGGACGAGAACGACGACGCGTCGCCGAGAAAGTCTCAGCTCGCAATTCAGATTGCAATGGTGATGGATCTACTCGACGCGAATCTCACAATGAGATCGAAACTATACCGCGACGCATCTCTTCGGTACATCTTCCTGATGAACAACGGAAGGTACATAGTACAGAAAATCAAAGGCTCAAGCGGAATTACCGAGTTGATGGGCGACCGTTGGTGCCGTAAACGATCGACGAATCTGCGACAATACCACAAAAATTACCAGAGAGAAACATGGAGTAAGGTATTGCAGTGCCTAAGCCACGAAGGATTGCTGGTGAACGGGAAGGTATCGAAGCCAATATTGAAGGAGAGATTCAAAAGCTTCAACGCGATGTTCGACGAAATACACAAAACGCAAAGCAGTTGGGTAGTGAGTGACGAGCAGCTTCAATCGGAGCTTAGGATTTCGGTGTCGGCCGTGATGATTCCGGCGTACCGTTCGTTCGTTGGGAGATTCAAGCAGCATTTCGATCCGGGAAGACAATCGGAGAAGTACATAAAGTATCAACCTGAAGACATTGAAGGTTTGATCGATGACCTGTTTGATGGAAATACTGCTTCCATGGGGAGAAGAAGAGTGTAG 2034 44.99 MEKNPPPEKSESFSKNFNRRIANLGSPRRTPDAAAAAAADAKSDSEKLAADRDDDAFVEDPLSESDTALIFEEVDRFLETLSNVGDDGSNLIHEIPSSIHSLSKMVDSMISRYNSNKYPAKLGKDPDRDSSFFEALGRISKIAIKLSEFPTSTASIPSLNRTTTALQRAMSLLDEEFNALLKECKHRELDSKPDKKASKQSSFKTINESADQQNSTIPESSESDSAKEEIFPSFSQETISNMKRIAGAMISAGYEKECCMSYSFLRQSSFKGILNKLGYESISIDEIQKMQWETLQSEIDKWIAVVKKCSKSLFPGEWKLCDSVFTDYPFISHTLFSNLTRAVVIKLLNFANAVVLTKRSAEKMFKLLDMYETIRDLIPVINGFPENCRTELISEAEGAKSGIGEAIVGIFYDLESSIKSDNAKIPVPGGAVHPLTRYIMNYLKYACEYKETLEQVFQFLDPKVEEDRPARMDENDDASPRKSQLAIQIAMVMDLLDANLTMRSKLYRDASLRYIFLMNNGRYIVQKIKGSSGITELMGDRWCRKRSTNLRQYHKNYQRETWSKVLQCLSHEGLLVNGKVSKPILKERFKSFNAMFDEIHKTQSSWVVSDEQLQSELRISVSAVMIPAYRSFVGRFKQHFDPGRQSEKYIKYQPEDIEGLIDDLFDGNTASMGRRRV 677
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 30207753 30209786 - CcPI632755_07g016150.1 Cco07g1615 184268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco07g1615 677 MobiDBLite consensus disorder prediction 202 228 - -
Cco07g1615 677 MobiDBLite consensus disorder prediction 1 15 - -
Cco07g1615 677 Pfam Exocyst complex component Exo70 N-terminal 104 183 - -
Cco07g1615 677 FunFam Exocyst subunit Exo70 family protein 115 673 - -
Cco07g1615 677 SUPERFAMILY Cullin repeat-like 121 666 IPR016159 -
Cco07g1615 677 Gene3D Exocyst complex component Exo70 115 675 - -
Cco07g1615 677 MobiDBLite consensus disorder prediction 1 59 - -
Cco07g1615 677 Pfam Exo70 exocyst complex subunit C-terminal 301 663 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
Cco07g1615 677 PANTHER EXOCYST COMPLEX PROTEIN EXO70 103 668 IPR004140 GO:0000145(PANTHER)|GO:0000145(InterPro)|GO:0006887(InterPro)|GO:0006887(PANTHER)
Cco07g1615 677 MobiDBLite consensus disorder prediction 188 228 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco01g0910 Cco-Chr1:10083358 Cco07g1615 Cco-Chr7:30207753 4.70E-173 dispersed
Cco07g1615 Cco-Chr7:30207753 Cco07g1710 Cco-Chr7:31087317 7.60E-72 dispersed
Cco07g1615 Cco-Chr7:30207753 Cco03g0205 Cco-Chr3:2123041 5.60E-67 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco07g1615 K07195 - csv:101220402 1240.71