Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco07g1638 ATGCAAGAAGCTTTTCTTAATTTGTATTTAACAATGGCGGTTGGGAGTACTGTATCAGTTTTCTGCTCTTCTTCCTTAACTCTTCTTCTTCTTCTTCTGCTCGTATTTCCATTTGGGTCTAATTCTGAGGATCTAAAAGCTTGCAAGTTTGATGCCATATTTCAGTTTGGGGATTCCTTAGCTGACACTGGAAATCTGATACGAGAGAACCCTTCGACTCCTTTTTCTCATCTTCCTTATGGCGAAACGTTCTTTAAGAAAGCCACTGGAAGATGTTCTAATGGCTTACTTATGGTCGATTACTTTGCTTTGGCAGCAGGGCTTCCTTTGGTGAATCCCTACTTGAAAAAGAAGGCATCTTTCACTCATGGAGTGAATTTTGCGGTGGCTGGCTCTACTGCCTTGCCTTTGAATGTTCTTGCTCAAAACAACATCTCATCTCCGGTTACCAACACATCTCTGAGTAAACAACTTGAATGGATGCATTCATATCTCAATACTATTTGTTCTAACAAAAGAGATTGTACTAAGAAGTTAAAGCATGCATTATTTTTTATGGGGGAGATTGGAGGGAATGATTATAACTATGCTCTATTTGAAGGCAAAACTGTTGCTGAAGTAAAAAATATGGTACCTGGAGTTGTACAAACAATAATAGATGCTACTAGAAGGGTCATCGATTATGGTGCTACTCGAGTTATTATTCCAGGACATTTTTCAATGGGTTGTCTACCAATCTACCTCACTGGCTTTCAAACCAATTATTCAACTGCTTATGACAAGTTTCATTGTTTAAAGGATTTCAACGGTTTAGCAAGTTATCATAATAACAAATTGAAGCAAGCTATCAAGCTGTTGAGAAAAGAGAATCCTAACACCATAATTACATATGGTGATTATTATAATGCATTATTTTGGATTTTCCGACATGCTTCTTTGCTTGGGTCTCAAGGCCTTGAAGTCTCAGCTCAGGGGCTTGGGTGCATGGGCATGTCCTCATATTACGGCCCTGCTCAGCCACAAGAAGACATGATTGCCCTCATCCACCACGCCGTCGCGGCCGGGGTCACCTTCTTGGATACCTCAGACATATACGGCCCTTTCACCAACGAGACCCTCCTTGGAAATGCTCTTAAGACCGATGGGGTTAGGGACAAGGTTCAGTTGGCTACCAAATTTGGACTCCATCTCGCCCACGGTAACTTCGAGGTCCACGGCCATCCGGCCTATGTTAGGGCCGCGTGTGAGGCCAGCTTGGACCGCCTTGGGGTTCATTGTATCGATCTCTATTATCAGCATCGGATCGATACTAAAGTTCCCATTGAAATCACGATTGGGGAGCTGAAGAAATTGGTTGAAGAAGGGAAAATAAAGTACATAGGTTTATCTGAAGCTTCAGCCTCTACCATTAGAAGAGCTCATGCAGTTCATCCAATTACAGCAGTTCAAATCGAATGGGAACTGGGCATTGGAATTGTGGCATACAGTCCTCTGGGAAGGGGTTTTCTATCTTCTGGGGCCAACTTCATTGAAAACTTAACAGATGATGACTACAGAAAGAAACTCCCTCGATTTCAACCCGAAAACTTGGAGCACAACAAGACCATATTCGAGAAGGTTAGCGAATTGGCAGCTAGAAAAGGGTGCACCACATCTCAGCTAGCCTTAGCATGGGTTCACCACCAAGGGACCGATGTGGTTCCAATTCCTGGAACCACTAAGCTTAAAAATCTGCAATCAAACATTGAAGCTTTGTCATTGAAACTTACACCACAAGAAATGGCTGAACTTGAAGCCTATGCTTTAGCTGATGGAGTTAAAGGAGACAGATATGGTGATGACATTTCCACTTGGAAACAATCTGAAACCCCACCACTTTCTTCATGGAAATTTTGA 1896 42.35 MQEAFLNLYLTMAVGSTVSVFCSSSLTLLLLLLLVFPFGSNSEDLKACKFDAIFQFGDSLADTGNLIRENPSTPFSHLPYGETFFKKATGRCSNGLLMVDYFALAAGLPLVNPYLKKKASFTHGVNFAVAGSTALPLNVLAQNNISSPVTNTSLSKQLEWMHSYLNTICSNKRDCTKKLKHALFFMGEIGGNDYNYALFEGKTVAEVKNMVPGVVQTIIDATRRVIDYGATRVIIPGHFSMGCLPIYLTGFQTNYSTAYDKFHCLKDFNGLASYHNNKLKQAIKLLRKENPNTIITYGDYYNALFWIFRHASLLGSQGLEVSAQGLGCMGMSSYYGPAQPQEDMIALIHHAVAAGVTFLDTSDIYGPFTNETLLGNALKTDGVRDKVQLATKFGLHLAHGNFEVHGHPAYVRAACEASLDRLGVHCIDLYYQHRIDTKVPIEITIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQIEWELGIGIVAYSPLGRGFLSSGANFIENLTDDDYRKKLPRFQPENLEHNKTIFEKVSELAARKGCTTSQLALAWVHHQGTDVVPIPGTTKLKNLQSNIEALSLKLTPQEMAELEAYALADGVKGDRYGDDISTWKQSETPPLSSWKF 631
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 30487079 30493935 + CcPI632755_07g016380.1 Cco07g1638 184291

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cco07g1638 631 PANTHER AFLATOXIN B1 ALDEHYDE REDUCTASE 313 611 IPR050791 GO:0004033(PANTHER)|GO:0005737(PANTHER)
Cco07g1638 631 Gene3D - 311 627 IPR036812 -
Cco07g1638 631 Pfam GDSL-like Lipase/Acylhydrolase 53 308 IPR001087 GO:0016788(InterPro)
Cco07g1638 631 CDD AKR_AKR13D1 314 597 - -
Cco07g1638 631 Pfam Aldo/keto reductase family 326 599 IPR023210 -
Cco07g1638 631 SUPERFAMILY NAD(P)-linked oxidoreductase 314 603 IPR036812 -
Cco07g1638 631 CDD SGNH_plant_lipase_like 52 336 IPR035669 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco07g1638 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco07g1628 Cco-Chr7:30343601 Cco07g1638 Cco-Chr7:30487079 7.30E-140 dispersed
Cco07g1638 Cco-Chr7:30487079 Cco10g0100 Cco-Chr10:933154 3.60E-116 dispersed
Cco07g1638 Cco-Chr7:30487079 Cco04g2142 Cco-Chr4:35219823 1.50E-50 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g1074 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone15ag0623 . . . . . . Blo02g00409 . . Bda13g00295 . . . . . . . . . . . . . . . . . . . . Cla07g01481 Cam07g1578 Cec07g1677 Cco07g1638 Clacu07g1569 Cmu07g1537 Cre07g1913 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0016358 0 0 0 0 0 1 0 1 1 0 1 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 0 0 0 8