Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco07g1675 ATGATTATGGCTCTTCCCATTTCCAGATTACCCTCTCTCTTTCCCCTTCTACCCATTTTTCTTGCCTTCTCTACCTTTCTTGTTTCAACAGAAGCATATGATCCACTTGATCCAAATGGAAACATTACTATCAAATGGGATATTATGAGCTGGACTGCTGATGGATATGTTGGTGTTGTTACCCTGTATAATTTCCAACAATACCGGCATATTCAAACTCCGGGATGGTCTCTCCAATGGAAATGGGCAAAGAAAGAGGTCATATGGAACATGTTGGGAGGCCAAGCAACAGAGCAAGGTGATTGTTCTAGATTTAAAGGGAACATCCCCCATTGCTGCAAGAGGGATCCAACAGTTGTTGACCTATTGCCTGGAACTCCTTATAACCAGCAGATTGCAAATTGCTGCAGAGGTGGAGTTCTTAACTCCTGGGTGCAAGATCCAGCTACTGCAGTGAGCTCATTTCAGCTCACCGTTGGTTCAGCCGGAACCTCGAATAAAACTGTCCGACTGCCAAAGAACTTTACCTTAAAAGCACCTGGACCTGGTTATACCTGTGGACCGGCCAAAATTGTTAAACCGAGCAAATTCGTTTCCCCCGACAAACGGAGAGTTACACAGGCATTGATGACATGGAATGTTACATGCACATATTCACAATTTCTGGCCCAAAAAACTCCTACTTGCTGTGTCTCGCTGTCGTCATTTTACAACGACACAATTGTTTCTTGCCCGAAGTGCTCTTGTGGCTGCCAAGGCAACTTGAACGCACCCCAAAGTTGTGTGGAGCCAAATTCTCCGTATTTAGCCTCTGTTGTTAGCAGTGCTAGTTCTAGCAAGAGCAATTTGACACCATTGGTTCAGTGTACTGGCCATATGTGCCCGATTCGAGTTCACTGGCATGTGAAGCTTAACTATAAGGAGTATTGGAGGGTGAAGATCACAATTACAAACTTCAATTACATGATGAATTATACAAATTGGAACTTAGTTGTTCAACATCCGAACTTCGACAATCTAACACAGATTTTCAGCTTCAACTACCAGTCAATCAATCCGTATGGAACAATAAATGATACTGCAATCCTGTGGGGAGTCAAGTTCTACAACGATTTGCTCATGCAAGCAGGTCCTCTTGGGAATGTGCAGACAGAGCTACTATTCCGGAAGGATCAATCGACTTTCACATTTGACAAAGGCTGGGCTTTTCCTCGGAGGATCTATTTTAATGGCGACAATTGTGTTATGCCACCTCCGGAAGCCTATCCCTACTTACCAAACACAGGTTCTAAGCAAGATGTCTCGATGTTTACTATGCTATTGCTGATTTCCTTGACTCTCTTGTCCTTCCACCATTCGTTTGCATAA 1368 43.64 MIMALPISRLPSLFPLLPIFLAFSTFLVSTEAYDPLDPNGNITIKWDIMSWTADGYVGVVTLYNFQQYRHIQTPGWSLQWKWAKKEVIWNMLGGQATEQGDCSRFKGNIPHCCKRDPTVVDLLPGTPYNQQIANCCRGGVLNSWVQDPATAVSSFQLTVGSAGTSNKTVRLPKNFTLKAPGPGYTCGPAKIVKPSKFVSPDKRRVTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNDTIVSCPKCSCGCQGNLNAPQSCVEPNSPYLASVVSSASSSKSNLTPLVQCTGHMCPIRVHWHVKLNYKEYWRVKITITNFNYMMNYTNWNLVVQHPNFDNLTQIFSFNYQSINPYGTINDTAILWGVKFYNDLLMQAGPLGNVQTELLFRKDQSTFTFDKGWAFPRRIYFNGDNCVMPPPEAYPYLPNTGSKQDVSMFTMLLLISLTLLSFHHSFA 455
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 30751789 30754690 + CcPI632755_07g016750.1 Cco07g1675 184328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco07g1675 455 PANTHER PROTEIN COBRA 22 444 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)|GO:0046658(PANTHER)|GO:0052324(PANTHER)
Cco07g1675 455 Pfam COBRA-like protein 56 219 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
Cco07g1675 455 PIRSF COBRA 7 455 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco06g1748 Cco-Chr6:27966798 Cco07g1675 Cco-Chr7:30751789 2.10E-219 dispersed
Cco07g1675 Cco-Chr7:30751789 Cco07g1676 Cco-Chr7:30755228 5.40E-183 tandem
Cco02g0474 Cco-Chr2:4279807 Cco07g1675 Cco-Chr7:30751789 3.70E-118 transposed
Cco05g0753 Cco-Chr5:6189918 Cco07g1675 Cco-Chr7:30751789 2.00E-37 transposed
Cco05g1112 Cco-Chr5:10074567 Cco07g1675 Cco-Chr7:30751789 8.10E-136 transposed
Cco10g0528 Cco-Chr10:6301955 Cco07g1675 Cco-Chr7:30751789 3.50E-29 transposed
Cco01g1753 Cco-Chr1:30284527 Cco07g1675 Cco-Chr7:30751789 6.50E-147 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco07g1675 - - - 0.0