Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco07g1702 ATGAAGTACAATGCCACTTCCACATCGTTGACAGTCAACGCCTACGTGATGTCGCCTGTTGATTCTTTACGGGAGGAAAATGTTTACATGGCCAAGTTGGCCGAACAGGCTGAACGATATGAGGAAATGGTAGAGTTCATGGAGAAAGTTGCCAAGACTGTGGATGTCGAGGAGCTGACTGTTGAGGAGAGGAATCTCCTCTCTGTTGCTTACAAGAATGTCATTGGGGCTCGGAGGGCCTCATGGAGGATTATTTCTTCCATTGAGCAGAAGGAAGAGAGTCGGGGAAATGAGGACCATGTTGCAATTATCAAGGATTACCGTGGCAAAATCGAGACTGAACTGAGCAAGATCTGTGATGGAATTTTGAGCCTACTTGAGTCTCATCTCATCCCATCAGCCTCATCTGCTGAGTCAAAGGTGTTTTATCTCAAAATGAAAGGTGATTACCACAGGTACCTGGCTGAGTTTAAGACTGGAGCTGAACGAAAAGAAGCAGCTGAGAGCACATTGTTAGCCTACAAGTCTGCTCAGGATATCGCTCTTGCTGAATTGGCTCCTACTCATCCAATTAGGCTAGGTCTTGCTCTTAACTTCTCAGTGTTTTATTATGAGATCCTTAATTCGCCAGACCGTGCTTGCAATTTGGCAAAGCAGGCTTTTGACGAAGCAATTTCTGAGCTTGATACATTGGGTGAAGAATCATACAAGGATAGCACCTTGATCATGCAACTCCTCCGAGACAACTTGACCCTTTGGACTTCTGATATTGGGGACGAAGCTGGCGATGAGATTAAGGAAGCATCAAAACGTGAATCAGGGGAGGGACAGTAG 834 45.68 MKYNATSTSLTVNAYVMSPVDSLREENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVAIIKDYRGKIETELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDIGDEAGDEIKEASKRESGEGQ 277
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 31024817 31027413 + CcPI632755_07g017020.1 Cco07g1702 184355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco07g1702 277 Pfam 14-3-3 protein 30 254 IPR023410 -
Cco07g1702 277 FunFam 14-3-3 protein epsilon 20 267 - -
Cco07g1702 277 Coils Coil 23 50 - -
Cco07g1702 277 ProSitePatterns 14-3-3 proteins signature 2. 236 255 IPR023409 -
Cco07g1702 277 ProSitePatterns 14-3-3 proteins signature 1. 64 74 IPR023409 -
Cco07g1702 277 SUPERFAMILY 14-3-3 protein 24 256 IPR036815 -
Cco07g1702 277 PANTHER 14-3-3 PROTEIN 24 259 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Cco07g1702 277 PIRSF 14-3-3 19 266 IPR000308 -
Cco07g1702 277 SMART 1433_4 24 267 IPR023410 -
Cco07g1702 277 Gene3D - 3 267 IPR036815 -
Cco07g1702 277 PRINTS 14-3-3 protein zeta signature 107 131 IPR000308 -
Cco07g1702 277 PRINTS 14-3-3 protein zeta signature 138 160 IPR000308 -
Cco07g1702 277 PRINTS 14-3-3 protein zeta signature 173 199 IPR000308 -
Cco07g1702 277 PRINTS 14-3-3 protein zeta signature 200 226 IPR000308 -
Cco07g1702 277 PRINTS 14-3-3 protein zeta signature 58 87 IPR000308 -
Cco07g1702 277 PRINTS 14-3-3 protein zeta signature 227 256 IPR000308 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco07g1702 Cco-Chr7:31024817 Cco11g1473 Cco-Chr11:27549261 3.20E-117 dispersed
Cco07g1702 Cco-Chr7:31024817 Cco08g1276 Cco-Chr8:24564769 4.00E-120 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco07g1702 K06630 - csv:101222068 499.59