Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco07g1702 | ATGAAGTACAATGCCACTTCCACATCGTTGACAGTCAACGCCTACGTGATGTCGCCTGTTGATTCTTTACGGGAGGAAAATGTTTACATGGCCAAGTTGGCCGAACAGGCTGAACGATATGAGGAAATGGTAGAGTTCATGGAGAAAGTTGCCAAGACTGTGGATGTCGAGGAGCTGACTGTTGAGGAGAGGAATCTCCTCTCTGTTGCTTACAAGAATGTCATTGGGGCTCGGAGGGCCTCATGGAGGATTATTTCTTCCATTGAGCAGAAGGAAGAGAGTCGGGGAAATGAGGACCATGTTGCAATTATCAAGGATTACCGTGGCAAAATCGAGACTGAACTGAGCAAGATCTGTGATGGAATTTTGAGCCTACTTGAGTCTCATCTCATCCCATCAGCCTCATCTGCTGAGTCAAAGGTGTTTTATCTCAAAATGAAAGGTGATTACCACAGGTACCTGGCTGAGTTTAAGACTGGAGCTGAACGAAAAGAAGCAGCTGAGAGCACATTGTTAGCCTACAAGTCTGCTCAGGATATCGCTCTTGCTGAATTGGCTCCTACTCATCCAATTAGGCTAGGTCTTGCTCTTAACTTCTCAGTGTTTTATTATGAGATCCTTAATTCGCCAGACCGTGCTTGCAATTTGGCAAAGCAGGCTTTTGACGAAGCAATTTCTGAGCTTGATACATTGGGTGAAGAATCATACAAGGATAGCACCTTGATCATGCAACTCCTCCGAGACAACTTGACCCTTTGGACTTCTGATATTGGGGACGAAGCTGGCGATGAGATTAAGGAAGCATCAAAACGTGAATCAGGGGAGGGACAGTAG | 834 | 45.68 | MKYNATSTSLTVNAYVMSPVDSLREENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVAIIKDYRGKIETELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDIGDEAGDEIKEASKRESGEGQ | 277 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 31024817 | 31027413 | + | CcPI632755_07g017020.1 | Cco07g1702 | 184355 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco07g1702 | 277 | Pfam | 14-3-3 protein | 30 | 254 | IPR023410 | - | |
Cco07g1702 | 277 | FunFam | 14-3-3 protein epsilon | 20 | 267 | - | - | |
Cco07g1702 | 277 | Coils | Coil | 23 | 50 | - | - | |
Cco07g1702 | 277 | ProSitePatterns | 14-3-3 proteins signature 2. | 236 | 255 | IPR023409 | - | |
Cco07g1702 | 277 | ProSitePatterns | 14-3-3 proteins signature 1. | 64 | 74 | IPR023409 | - | |
Cco07g1702 | 277 | SUPERFAMILY | 14-3-3 protein | 24 | 256 | IPR036815 | - | |
Cco07g1702 | 277 | PANTHER | 14-3-3 PROTEIN | 24 | 259 | IPR000308 | GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER) | |
Cco07g1702 | 277 | PIRSF | 14-3-3 | 19 | 266 | IPR000308 | - | |
Cco07g1702 | 277 | SMART | 1433_4 | 24 | 267 | IPR023410 | - | |
Cco07g1702 | 277 | Gene3D | - | 3 | 267 | IPR036815 | - | |
Cco07g1702 | 277 | PRINTS | 14-3-3 protein zeta signature | 107 | 131 | IPR000308 | - | |
Cco07g1702 | 277 | PRINTS | 14-3-3 protein zeta signature | 138 | 160 | IPR000308 | - | |
Cco07g1702 | 277 | PRINTS | 14-3-3 protein zeta signature | 173 | 199 | IPR000308 | - | |
Cco07g1702 | 277 | PRINTS | 14-3-3 protein zeta signature | 200 | 226 | IPR000308 | - | |
Cco07g1702 | 277 | PRINTS | 14-3-3 protein zeta signature | 58 | 87 | IPR000308 | - | |
Cco07g1702 | 277 | PRINTS | 14-3-3 protein zeta signature | 227 | 256 | IPR000308 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco07g1702 | Cco-Chr7:31024817 | Cco11g1473 | Cco-Chr11:27549261 | 3.20E-117 | dispersed | |
Cco07g1702 | Cco-Chr7:31024817 | Cco08g1276 | Cco-Chr8:24564769 | 4.00E-120 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco07g1702 | K06630 | - | csv:101222068 | 499.59 |