Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco07g1747 ATGAAATTTTCAGTTTCTCCCATTTTCAAATCCCCCGCCATTTCCCCCAGATTCTTCTTCTCCACCGCCATGTCCACTTCTGATCACTCTCCCCCTGCCTTCGACCGACCTCGCTCCGTCATCAAGAAGATTCTTGCTAAACTCCAGCACGAAGGCGACGGCGCCGTCGTTCGTCGAGGCATCGGAAGGAATGATTTGAAGAATCTAGATCCATTTCTTATGCTCGATGATTTCTCTGTCAGTCCGCCGGCTGGATTCCCCGATCATCCTCACAGAGGTTTTGAGACAGTGACGTACATGTTACAGGGAGGGATTACCCATCAAGATTTTGCTGGCCACAAGGGTACAATCAGAACAGGGGATGTCCAGTGGATGACAGCAGGAAGAGGTATAATTCATTCGGAAATGCCTGCTGGTGAAGGATCTCAAAAGGGTTTGCAGCTTTGGATCAATCTTGCATCCCATGACAAAATGATGGAGCCAAGGTATCAGGAGATCTCAAGCGACAACATTCCAAGAGCGGAGAAAGACGGTGTGGAAGTTCGTGTCATAGCAGGAGAGTCTATGGGAGTTCATTCTCCAATCTACACTAGAACTCCAACTATGTACCTTGACTTTACTTTGAAACCAAGAGCTCAAGTGCATCAAAGCATTCCAGACTCGTGGACGTCTTTCGTGTACATAATCGACGGGGAAGGAGTGTTTGGGTCGCCGAACTCATCGCGGGTGGCGGCTCACCATGTTCTAGTATTGGGAGGTGGAGATGGGGTAAGTGTGTGGAACAGATCTTCAAAGCCATTGAGGTTTGTTTTGATTGCAGGGAAGCCCTTGAATGAGCCAATTGTTCAATATGGACCATTTGTTATGAACTCACAATCTGAAATTGACAAAGCAATTGAGGACTATCACTATTCCAAAAATGGGTTTGAAATGGCGAAGTATTGGCGATCTCAGTGA 957 47.13 MKFSVSPIFKSPAISPRFFFSTAMSTSDHSPPAFDRPRSVIKKILAKLQHEGDGAVVRRGIGRNDLKNLDPFLMLDDFSVSPPAGFPDHPHRGFETVTYMLQGGITHQDFAGHKGTIRTGDVQWMTAGRGIIHSEMPAGEGSQKGLQLWINLASHDKMMEPRYQEISSDNIPRAEKDGVEVRVIAGESMGVHSPIYTRTPTMYLDFTLKPRAQVHQSIPDSWTSFVYIIDGEGVFGSPNSSRVAAHHVLVLGGGDGVSVWNRSSKPLRFVLIAGKPLNEPIVQYGPFVMNSQSEIDKAIEDYHYSKNGFEMAKYWRSQ 318
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 31571002 31573202 + CcPI632755_07g017470.1 Cco07g1747 184400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco07g1747 318 PIRSF Pirin 36 316 IPR012093 -
Cco07g1747 318 Gene3D Jelly Rolls 172 277 IPR014710 -
Cco07g1747 318 Pfam Pirin C-terminal cupin domain 203 307 IPR008778 -
Cco07g1747 318 CDD cupin_pirin_C 200 276 - -
Cco07g1747 318 FunFam pirin 51 183 - -
Cco07g1747 318 Gene3D Jelly Rolls 51 303 IPR014710 -
Cco07g1747 318 Pfam Pirin 57 150 IPR003829 -
Cco07g1747 318 PANTHER PIRIN-RELATED 29 318 IPR012093 -
Cco07g1747 318 CDD cupin_pirin_N 55 152 - -
Cco07g1747 318 SUPERFAMILY RmlC-like cupins 38 316 IPR011051 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco07g1747 Cco-Chr7:31571002 Cco09g2296 Cco-Chr9:37210392 4.30E-118 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco07g1747 K06911 - csv:101205861 608.601