Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco07g1778 ATGATGCCCAAATGTAAAACCTTCACAACAACGACAACCCATGCAAAATTAGACAAATACCAAGAACATGATGAATATGGGTCCTTCGCCGGATCTTCACGGCGGTGCGTGCTCGACCCGCGCGCAGCGTGGGTCCAGCGGTGGAATCGCGTGGTTCTGCTGGCACGTGCAGCCTCGGTGGCGGTTGACCCGCTCTTCTTTTACGTCATTTTCCTCACCAAGGCTGGCTCGCCCTGCTTCTACCGGGATACGGCTGTTGCTGCCGTCGTCACCGCCGTACGCACGTGCGTGGACATGGTGCACGTCTGCCACGTGTGGATGCAGTTCCGTCTGGCGTTCATTTCGACGGCGTCGTTGGTGGTCGGAAGTGGAAGCCTCGTGTGGGACGCACGTGCCATTACTTCTCACTATTTGAGGTCCTTCAGAGGCTTTTGGCTCGATTTGTTTGTCATTATTCCCATCCCTCAGTTCCTTCCAAAGCTTTACCACAGCATTTACTTGATGAAGAAGCTCCAAAAAGTCACTGGCTTTATCTTTGGCAGCATTTGGTGGCGCTTTAACCTCAATGTATTTGCCTATTTGATTGCCTCTCATGTTGTAGGCGGATGCTGGTATCTCCTTGCGACGCAACGACTAATCTCGTGCCTGGAACGAGAATGCGAGAAACGAAAAACGTGCAAACTGGCATTGTCTTGCTCCATATCTGGCTACAAGGGGGCTGGTAATTTTGGAGCTTTTTCCCATGGTAATAACTTGACAAAGATCAAGTCCTTATGCTTGGAGGTCGATGGACCCTTTAGCTATGGAATTTATGAGCCTGTTCTTTTGGTATTCTCTAGCAACTCTCTGGCTGTTAGAATTCTTTATCCTATCTTCTGGGGTTTATTGAACCTAAGTTCCTTTGGCAATGAACTTGATCCCACATGTGATTTGGTGGAAGTGATATTCAGTAGCTGCATGACACTTGGGGGATTGGTGCTGTTTGTTACCCTAATTGGAAATATACAGATTTTCTTGCAAACTGTCATGGCAAGTAAGGAGGATATGCAAATACGGTTCCGAGATATGGAGTGGTGGATGAAGAGGCGACAATTGCCCATTCATTTGAGAGAAAGAGTTCGCAATTTTGAATATCAAAGGTGGGTAGCCATGGGAGGGCTAGATGAGACCGAACTAATCGGAGGCTTGCCCGATGGCCTTCGTCGAGACATCAAACATTACCTTTGTTTAGACCTTGTTAAGAAGGTACCCTTCTTCGACATGCTCGATGATCTCATACTCGATAACATTTGTGATCGTGTTAAACCGCTCCTATTTGCTAAAGGTGAAAAGATAGTAAGGGAGGGAGACCCTGTGCAAAGAATGGTGTTTATTATTGAAGGATGCGTGGAGCATAGGCGAGGATGCCTAAGCAAAGGCTTTGTAGGCACCAGTTGGCTCAATTCCGGTGGCTTTTTTGGGGAGGAGCTACTGTCGTGGTGTCTCCGATTTCAACACCCTCCATATTTCAATAAGCTTCCAACCTCATTGGCAACATTTACATGTTTACAGCCAGTCGAAGCATATGGCCTCGACGCATCCGATCTCAAATACATTACCAAACACTTCCGTTACATGTTTGCTAGTGAAAAGCTGAAGCAAACTATGCGTTATTACTCTTCAAATTGGCGAACATGGGGAGCTGTGATTATTCAGTTTTCATGGCGTCGTCATCGGACACAAAACCGACCCATGACTCACAACCGACTAAGGCAGTATCATACAATTTTCTTATCATTGAAGCCGAACGATCATCTCGAGTAG 1803 47.03 MMPKCKTFTTTTTHAKLDKYQEHDEYGSFAGSSRRCVLDPRAAWVQRWNRVVLLARAASVAVDPLFFYVIFLTKAGSPCFYRDTAVAAVVTAVRTCVDMVHVCHVWMQFRLAFISTASLVVGSGSLVWDARAITSHYLRSFRGFWLDLFVIIPIPQFLPKLYHSIYLMKKLQKVTGFIFGSIWWRFNLNVFAYLIASHVVGGCWYLLATQRLISCLERECEKRKTCKLALSCSISGYKGAGNFGAFSHGNNLTKIKSLCLEVDGPFSYGIYEPVLLVFSSNSLAVRILYPIFWGLLNLSSFGNELDPTCDLVEVIFSSCMTLGGLVLFVTLIGNIQIFLQTVMASKEDMQIRFRDMEWWMKRRQLPIHLRERVRNFEYQRWVAMGGLDETELIGGLPDGLRRDIKHYLCLDLVKKVPFFDMLDDLILDNICDRVKPLLFAKGEKIVREGDPVQRMVFIIEGCVEHRRGCLSKGFVGTSWLNSGGFFGEELLSWCLRFQHPPYFNKLPTSLATFTCLQPVEAYGLDASDLKYITKHFRYMFASEKLKQTMRYYSSNWRTWGAVIIQFSWRRHRTQNRPMTHNRLRQYHTIFLSLKPNDHLE 600
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 31929143 31933130 - CcPI632755_07g017780.1 Cco07g1778 184431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco07g1778 600 Gene3D Jelly Rolls 416 538 IPR014710 -
Cco07g1778 600 SUPERFAMILY cAMP-binding domain-like 346 537 IPR018490 -
Cco07g1778 600 ProSiteProfiles cAMP/cGMP binding motif profile. 418 491 IPR000595 -
Cco07g1778 600 CDD CAP_ED 418 532 IPR000595 -
Cco07g1778 600 SUPERFAMILY Voltage-gated potassium channels 43 340 - -
Cco07g1778 600 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 29 578 - -
Cco07g1778 600 Gene3D Helix hairpin bin 344 409 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco07g1778 Cco-Chr7:31929143 Cco11g0474 Cco-Chr11:5052540 2.90E-200 dispersed
Cco07g1778 Cco-Chr7:31929143 Cco10g1423 Cco-Chr10:27327317 2.10E-94 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco07g1778 K05391 - rcu:8281281 721.465