Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco07g1780 GTTGCAGGTTACTGCTTATGGGGCAAGATACCTCTGGAATCACTTTACATTTCGTGGCAGAATTCATCAAATTTTGGTCTTGGACAGAGGGCTGAGATAATGTCAACCGTTGACATGCGCTCTTGTGTTGTGAAGACAAGTTGCTTGGATGGAGAGAAGTGTATAGGATTTCAAATTCCATATAATTCTGATTCTATGCATTCAGCACAACAAGTACAGGTCACAATTTCTGCAGAAGAGTTTGGTGCTAGGGATAAATCTCCATATGATTCATACACATACAGTGAAATACCTTCCTCATCACTATCTCATATGATTCGGTTGAGGGCGGGAAACGTTATTTTCAATTATAGGTACTACAACAACAGATTGCAGAAAACTGAAGTAACTGAAGACTTTTCCTGTCCATTTTGCTTGGTTAAATGTGCAAGCTTTAAGGGCTTGAGATGTCACTTGTTATCATTACACGATCTCTTCAACTTTGAGTTTTGGGTAACCGAAGAGTATCAAGCTGTAAATGTTACCACGAAAACTGATGTTTGGAGGTCTGAGATCATCGCAGATGGCATTGATCCAAAGCAGCAGACGTTCTTCTTCTGCTCAAGACCTCTCAGACGCAAAAAAGTTAAGAGCGCAGTTCAAAGTGCAAAGCACATACATCCTTTTGTTGTAGAGTCAGAATATTCAGACAAGGCGGATGATGCTCAATCTAGCAAAGGTGAAAAGGCTCAAATATCAGGTTTTTTAAGTACCACTCTGCATTCATCCTATGATCCTGACTGCGTACAATCAATATCAGGGCACAATGTCACACCAACTATGCTTCAATTTGCCAAGACAAGAAAATTGTCGATTGAACGTGCAGACCTGAGACACTGTACCCTCTTAAGGAAGAGACAGTTCTTTCATTCCCACAGAGCTCAGCCAATGGCATTGGAACAAGTGTTATCAGATCGAGATAGCGAAGATGAAGTTGATGATGATGTAGCAGATCTTGAGGATAGGAGGATGCTTGATGATTTTGTTGATGTAACCAGAGATGAGAAGCGAATGATGCATATGTGGAATTCATTTGTCAGGAAGCAACGGGTGCTGGCTGATGGCCATATCCCCTGGGCTTGTGAGGCATTTTCACAATTACATGGACCAAACCTTGTCAAAACTCCAGCTCTACTATGGTGCTGGAGATTGTTTATGATTAAGTTATGGAACCATGTCAAGATTATTGGTGAAAGAGAGGGGTACAAGCGGAAACCGGCAGACTCAAAGAAATCGACCAACCCGACCTATCTGGGTTGTCTTTGTCGCTTCATCGTGGATTTCATGAAAGATGAGTTATATGATGAAGAAACAATGATGCAAGTAACCAATTACTTGAGATCCATTGTCCTTTTGGAAGTGCTCGATTGTCCAACTCCTTTAGTTTTGCTTTTGGCATGTTAG 1443 41.3 VAGYCLWGKIPLESLYISWQNSSNFGLGQRAEIMSTVDMRSCVVKTSCLDGEKCIGFQIPYNSDSMHSAQQVQVTISAEEFGARDKSPYDSYTYSEIPSSSLSHMIRLRAGNVIFNYRYYNNRLQKTEVTEDFSCPFCLVKCASFKGLRCHLLSLHDLFNFEFWVTEEYQAVNVTTKTDVWRSEIIADGIDPKQQTFFFCSRPLRRKKVKSAVQSAKHIHPFVVESEYSDKADDAQSSKGEKAQISGFLSTTLHSSYDPDCVQSISGHNVTPTMLQFAKTRKLSIERADLRHCTLLRKRQFFHSHRAQPMALEQVLSDRDSEDEVDDDVADLEDRRMLDDFVDVTRDEKRMMHMWNSFVRKQRVLADGHIPWACEAFSQLHGPNLVKTPALLWCWRLFMIKLWNHVKIIGEREGYKRKPADSKKSTNPTYLGCLCRFIVDFMKDELYDEETMMQVTNYLRSIVLLEVLDCPTPLVLLLAC 480
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 31944385 31959295 - CcPI632755_07g017800.1 Cco07g1780 184433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco07g1780 480 CDD ZnB-Zn_EMF2-like 102 181 - -
Cco07g1780 480 CDD VEFS-box_EMF2-like 296 405 - -
Cco07g1780 480 PANTHER POLYCOMB GROUP PROTEIN 3 406 - GO:0005634(PANTHER)|GO:0031490(PANTHER)
Cco07g1780 480 Pfam VEFS-Box of polycomb protein 283 406 IPR019135 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco07g1780 Cco-Chr7:31944385 Cco10g0238 Cco-Chr10:2517319 5.90E-63 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco07g1780 - - - 0.0