Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco07g1807 ATGGCCAATACCATCTTCCCTCTCTTCCTCTTCTTCTTCTTCTTCTTCTTCCTCCACTTTCCATCGCTTTCTCCGGCCAAACTCCGGCCCGATTTCTACACCTACTCATGCCCTCAGGCGGAATCCATCGTCCGGTCTGTGATGCAGAAAGCTCTCATCAGAGAGCCTCGGAGTGTCGCCTCCGTTATGCGCTTCCAGTTTCACGATTGCTTCGTTAATGGCTGTGATGCTTCTATGCTGCTCGATGATACGCCGACCATGCTCGGAGAGAAACTCGCTCTCTCTAACATTAATTCTCTTAGATCTTACGAAGTTGTCGATGAAGTGAAGGAGGCCTTGGAGAAGGTCTGTCCTGGAATCGTCTCTTGTGCAGATATCATAATTATGGCATCCAGAGACGCCGTTGCTCTCACTGGCGGCCCCAACTGGGCAGTGCGATTGGGGCGGCTGGACAGCTTAACAGCAAGCCAAGAGGACTCAAACCAGATCATGCCAAGTCCAAGAGCCAATGCAACCTCTCTCATTGACCTTTTCAACAAATACAACCTTTCTGTTAAAGATTTGGTTTCTCTTTCGGGTTCGCACTCGATCGGCCAAGGCCGGTGTTTCTCCATCATGTTTCGTCTGTACAACCAGTCCGGTACGGGGCGGCCGGACCCAGCCATCGAGCCGAGCTTCAGAGAAGAGCTCTTCAAGCGATGCCCTCAAGGTGGGGATGAAAATATGACAGTGAACCTTGATTCCACACCTTATGTTTTTGACAATCAGTACTTCAAGGACTTGGTTGGTGGGAGAGGGTTGTTGAATTCTGATGAAACTCTTTACACATTTGGTGAAACTAGAAGGTATGTGAGATTGTTTAGCCAAAATCAAAGTGCATTTTTCAGGGCGTTTGTGGAGGGTATGTTGAAGATGGGTGACTTGCAGTCTGGCCGCCCAGGGGAAGTAAGAAGGAACTGTCGGGTAGTCAATCGCCAGTCAGTGATCATATAA 993 49.24 MANTIFPLFLFFFFFFFLHFPSLSPAKLRPDFYTYSCPQAESIVRSVMQKALIREPRSVASVMRFQFHDCFVNGCDASMLLDDTPTMLGEKLALSNINSLRSYEVVDEVKEALEKVCPGIVSCADIIIMASRDAVALTGGPNWAVRLGRLDSLTASQEDSNQIMPSPRANATSLIDLFNKYNLSVKDLVSLSGSHSIGQGRCFSIMFRLYNQSGTGRPDPAIEPSFREELFKRCPQGGDENMTVNLDSTPYVFDNQYFKDLVGGRGLLNSDETLYTFGETRRYVRLFSQNQSAFFRAFVEGMLKMGDLQSGRPGEVRRNCRVVNRQSVII 330
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 32197567 32199508 - CcPI632755_07g018070.1 Cco07g1807 184460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco07g1807 330 CDD secretory_peroxidase 27 323 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cco07g1807 330 ProSiteProfiles Plant heme peroxidase family profile. 27 324 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco07g1807 330 Pfam Peroxidase 44 290 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco07g1807 330 FunFam Peroxidase 165 305 - -
Cco07g1807 330 Gene3D - 31 324 - -
Cco07g1807 330 Gene3D Peroxidase, domain 2 165 305 - -
Cco07g1807 330 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Cco07g1807 330 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco07g1807 330 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco07g1807 330 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco07g1807 330 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco07g1807 330 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco07g1807 330 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco07g1807 330 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco07g1807 330 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco07g1807 330 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco07g1807 330 PANTHER PEROXIDASE 72-RELATED 15 323 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco07g1807 330 SUPERFAMILY Heme-dependent peroxidases 28 324 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco07g1807 330 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco07g1807 330 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco07g1807 330 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco07g1807 330 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco07g1807 330 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cco07g1807 330 FunFam Peroxidase 31 174 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco07g1807 Cco-Chr7:32197567 Cco11g0108 Cco-Chr11:1159819 8.20E-72 dispersed
Cco07g1807 Cco-Chr7:32197567 Cco07g0944 Cco-Chr7:21624347 2.80E-80 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco07g1807 K00430 - csv:116406089 565.459