Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco07g1817 ATGGGATCATCGGTGAGCGATGAGGAAGCCCAGCTGTTTGCTATGCAAATGGCTAGCGCGTCTGTGCTTCCAATGGTGCTGAAGGCGGCGATTGAGCTGGATTTGCTGGAAATCATTGGGAGGGACGGGGAGGGGGCTGCGTTATCCCCATCCCAAATCGCTTCCCAGCTGTCAGGGGTTAAAAACCCAGAGGCCCACGTGATGCTAGACCGCATGTTGCGCCTGCTGGCCAGCTACTCCATACTCACGTACTCCCTCAATACCCTCCCCGATGGCACCGTGGAGAGGCTCTATGGCCTCTCCCCTGTCTCCAAGTTCTTGATCAACAATCAAGACGGCGTCTCTATTGCCCCTCTTTGTCTCATGAATCAAGATAAAGTCCTTATGGAGAGCTGGTACCATTTGAAAGATGCAGTACTTGAAGGAGGGATTCCCTTCAACAGAGCCTACGGAATGGGGGCGTTCCAATACCATGGAAAAGATCCAAGATTCAACAAGGTGTTCAACAAGGGAATGTCCGACCATTCCACCATTACCATGAAGAAGATTCTGGAGACCTACAAAGGGTTTGAAGGGCTTAATTCAGTGGTGGATGTTGGGGGTGGCACCGGAGCGGTTCTCCACATGATAGTTTCCAAGTACCCTTCTATTAGGGGCATCAACTTCGACCTCCCTCATGTCATTGAGGATGCCCCTGCCTACCCAGGCGTGGAACATGTTGGAGGCGACATGTTTGACAGCGTTCCAAAGGGGGATGCCATTTTCATGAAGTGGATCTGCCACGATTGGAGCGACCACCACTGCCTCAAGTTCTTGAAGAATTGCTACGATGCGCTGCCGCAGCACGGCAAGGTGATTGTGGCGGAATGCATTCTTCCGGTAGCACCGGACAGCAGCCTCGCCACCAAGGGAGTCATTCACATAGACCTCATAATGCTGGCTCACAACCCCGGAGGCAAAGAAAGGACCGAGAAGGAGTTTCAAGCCTTGTCTAAGGCTGCAGGATTTCATGGTTTCAAGGTCCACTGTTGTGCTTTTAATACTTATGTCATGGAATTTCTCAAGACACCTTAG 1074 51.68 MGSSVSDEEAQLFAMQMASASVLPMVLKAAIELDLLEIIGRDGEGAALSPSQIASQLSGVKNPEAHVMLDRMLRLLASYSILTYSLNTLPDGTVERLYGLSPVSKFLINNQDGVSIAPLCLMNQDKVLMESWYHLKDAVLEGGIPFNRAYGMGAFQYHGKDPRFNKVFNKGMSDHSTITMKKILETYKGFEGLNSVVDVGGGTGAVLHMIVSKYPSIRGINFDLPHVIEDAPAYPGVEHVGGDMFDSVPKGDAIFMKWICHDWSDHHCLKFLKNCYDALPQHGKVIVAECILPVAPDSSLATKGVIHIDLIMLAHNPGGKERTEKEFQALSKAAGFHGFKVHCCAFNTYVMEFLKTP 357
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 32265124 32266197 - CcPI632755_07g018170.1 Cco07g1817 184470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco07g1817 357 FunFam Caffeic acid 3-O-methyltransferase 1 107 - -
Cco07g1817 357 Pfam Dimerisation domain 25 77 IPR012967 GO:0046983(InterPro)
Cco07g1817 357 SUPERFAMILY Winged helix DNA-binding domain 6 110 IPR036390 -
Cco07g1817 357 Pfam O-methyltransferase domain 132 336 IPR001077 GO:0008171(InterPro)
Cco07g1817 357 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 112 353 IPR029063 -
Cco07g1817 357 Gene3D - 2 107 IPR036388 -
Cco07g1817 357 PIRSF O-mtase 2 355 IPR016461 GO:0008168(InterPro)
Cco07g1817 357 PANTHER O-METHYLTRANSFERASE 9 344 IPR016461 GO:0008168(InterPro)|GO:0008171(PANTHER)|GO:0008757(PANTHER)|GO:0019438(PANTHER)|GO:0032259(PANTHER)
Cco07g1817 357 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 15 355 IPR016461 GO:0008168(InterPro)
Cco07g1817 357 CDD AdoMet_MTases 196 287 - -
Cco07g1817 357 FunFam Caffeic acid O-methyltransferase 108 355 - -
Cco07g1817 357 Gene3D Vaccinia Virus protein VP39 108 355 IPR029063 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco07g1817 Cco-Chr7:32265124 Cco10g0408 Cco-Chr10:4849876 4.20E-114 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco07g1817 K13066 - csv:101204109 672.544