Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco08g0683 | ATGTTTGCGCTTGCTGTTCCCTACCATCATTGGACCGGGAACCATTTGGGGTTTGTTGTTATGTATGGCCTTACTTTTTTCTTTGCTAATTTTGGTCCTAATAGTACTACCTTTGTTGTCCCTGCTGAGATTTTTCCGGCCCGGTTCCGGTCCACTTGTCATGGGATATCGGCTGCAGCTGGGAAAGCCGGGGCTATCCTTGGAGCTTTTGGGTTCTTGTATGCGGCTCAGAGTCAGGACCCGACAAAGACCGATGCCGGTTACCCGCCCGGGATTGGAATGAGGAATTCTTTGATCATTTTGGGAGTTGTTAATGTGTTCAGATTGCTTTTTACTTTTTTGGTTCCGGAATCTAAAGGGAAGTCTTTGGAAGAAATGTCGAAGGAGAATCAAGTTGAAGAAGAAGAACATGAAGAAAGTAAAGAGCAAGTTAATGGAGTTGAACAGATATCAAGCACTTATGAGCCCTCACCTCACACCGAAGCCCTTAACGTCAAAACCCTCAACGCCGAAGCCCTCACTTCATCGTGTTCAGCCACTTCAACCACCGTCACAGTCCCTGTTGTTTCTGTCGCTTCCATCAATCATCGTTGCTTTCATTCATCGCTGTCGTTGCTTCCGCCGTTGTTTTCAGCCGAAGGAAGCAAGATGACTCCAAACGATTCTTCACTTCTAAACCCTAGACGAACTTCTACGGCTTTCAACTTCTTTCCAAATTGGATATCCCCATTCTCACCCTCATTTTCTTAA | 750 | 45.87 | MFALAVPYHHWTGNHLGFVVMYGLTFFFANFGPNSTTFVVPAEIFPARFRSTCHGISAAAGKAGAILGAFGFLYAAQSQDPTKTDAGYPPGIGMRNSLIILGVVNVFRLLFTFLVPESKGKSLEEMSKENQVEEEEHEESKEQVNGVEQISSTYEPSPHTEALNVKTLNAEALTSSCSATSTTVTVPVVSVASINHRCFHSSLSLLPPLFSAEGSKMTPNDSSLLNPRRTSTAFNFFPNWISPFSPSFS | 249 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 18150366 | 18154942 | - | CcPI632755_08g006830.1 | Cco08g0683 | 185157 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco08g0683 | 249 | ProSiteProfiles | Major facilitator superfamily (MFS) profile. | 1 | 120 | IPR020846 | GO:0022857(InterPro) | |
Cco08g0683 | 249 | Pfam | Sugar (and other) transporter | 12 | 128 | IPR005828 | GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro) | |
Cco08g0683 | 249 | MobiDBLite | consensus disorder prediction | 123 | 147 | - | - | |
Cco08g0683 | 249 | Coils | Coil | 123 | 150 | - | - | |
Cco08g0683 | 249 | Gene3D | MFS general substrate transporter like domains | 1 | 144 | IPR036259 | - | |
Cco08g0683 | 249 | PANTHER | SOLUTE CARRIER FAMILY 22 MEMBER | 18 | 128 | - | - | |
Cco08g0683 | 249 | MobiDBLite | consensus disorder prediction | 123 | 144 | - | - | |
Cco08g0683 | 249 | SUPERFAMILY | MFS general substrate transporter | 8 | 129 | IPR036259 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco08g0683 | Cco-Chr8:18150366 | Cco11g1953 | Cco-Chr11:32071316 | 7.20E-28 | dispersed | |
Cco08g0683 | Cco-Chr8:18150366 | Cco07g0102 | Cco-Chr7:1049884 | 6.90E-55 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco08g0683 | K08176 | - | csv:101205342 | 228.794 |