Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cco08g0684 ATGTTGGGTTCTTTGCCTGCGGTTTTAACTTACTATTGGCGGATGAAAATGCCCGAAACGCCGCGTTACACTGCCTTGGTTGCGAACGACAATAAGAAAGCTTGTGATGACATGTCGAAAGTGTTGAATTTGGAAATTGGTCAAAATGTGGTAAATGAAACCCAAATTAAAACAGACTCCAATTCGAATTCAAATTCATTTGGGTTTTTTAGTAAGAAATTTATTCAAAGACATGGGATTCATCTTCTAGGAACTGCCACTACTTGGTTTTTAATCGACGTGGCATATTATAGCCAAAATTTATTCCAGAAAGACATTTTTAGTGCCGTGGGTTGGTTGCCACAGCCCAAAACAATGAGTGCTTTAGAAGAGGTTTTCAAAATCGTTAAGGCTCAGACACTTATTGCCCTTTGTGGGACCGTTCCGGGCTATTGGGCCACGGTCTTCTAA 450 40.44 MLGSLPAVLTYYWRMKMPETPRYTALVANDNKKACDDMSKVLNLEIGQNVVNETQIKTDSNSNSNSFGFFSKKFIQRHGIHLLGTATTWFLIDVAYYSQNLFQKDIFSAVGWLPQPKTMSALEEVFKIVKAQTLIALCGTVPGYWATVF 149
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 18155001 18155450 - CcPI632755_08g006840.1 Cco08g0684 185158
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cco08g0684 149 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 1 149 - -
Cco08g0684 149 Gene3D MFS general substrate transporter like domains 1 149 IPR036259 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco08g0684 Cco-Chr8:18155001 Cco11g1953 Cco-Chr11:32071316 2.40E-31 dispersed
Cco08g0684 Cco-Chr8:18155001 Cco07g0102 Cco-Chr7:1049884 9.20E-55 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco08g0684 K08176 - csv:101205342 266.159