Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cco08g0684 | ATGTTGGGTTCTTTGCCTGCGGTTTTAACTTACTATTGGCGGATGAAAATGCCCGAAACGCCGCGTTACACTGCCTTGGTTGCGAACGACAATAAGAAAGCTTGTGATGACATGTCGAAAGTGTTGAATTTGGAAATTGGTCAAAATGTGGTAAATGAAACCCAAATTAAAACAGACTCCAATTCGAATTCAAATTCATTTGGGTTTTTTAGTAAGAAATTTATTCAAAGACATGGGATTCATCTTCTAGGAACTGCCACTACTTGGTTTTTAATCGACGTGGCATATTATAGCCAAAATTTATTCCAGAAAGACATTTTTAGTGCCGTGGGTTGGTTGCCACAGCCCAAAACAATGAGTGCTTTAGAAGAGGTTTTCAAAATCGTTAAGGCTCAGACACTTATTGCCCTTTGTGGGACCGTTCCGGGCTATTGGGCCACGGTCTTCTAA | 450 | 40.44 | MLGSLPAVLTYYWRMKMPETPRYTALVANDNKKACDDMSKVLNLEIGQNVVNETQIKTDSNSNSNSFGFFSKKFIQRHGIHLLGTATTWFLIDVAYYSQNLFQKDIFSAVGWLPQPKTMSALEEVFKIVKAQTLIALCGTVPGYWATVF | 149 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 18155001 | 18155450 | - | CcPI632755_08g006840.1 | Cco08g0684 | 185158 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cco08g0684 | 149 | PANTHER | SOLUTE CARRIER FAMILY 22 MEMBER | 1 | 149 | - | - | |
| Cco08g0684 | 149 | Gene3D | MFS general substrate transporter like domains | 1 | 149 | IPR036259 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cco08g0684 | Cco-Chr8:18155001 | Cco11g1953 | Cco-Chr11:32071316 | 2.40E-31 | dispersed | |
| Cco08g0684 | Cco-Chr8:18155001 | Cco07g0102 | Cco-Chr7:1049884 | 9.20E-55 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cco08g0684 | K08176 | - | csv:101205342 | 266.159 |