Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco08g0685 | ATGGCCAATGACCAGCTCCAGCTTCTGACTGTCCTTGATCGTGCAAAGACCCAATTCTACCATTTCACGGCGGTGGTAATCGCCGGAATGGGCTTCTTCACCGATTCCTACGACCTCTTCTGCATCTCTCTCGTCACAAAACTCCTCGGCCGCATTTACTACACCGTAGAAGGCTCCCCCCGTCCCGGAACCCTCCCTCCCGCCGTCGCCGCCGCCGTCAACGGCGTCGCCCTCGCCGGCACTCTCGTCGGTCAACTCTTCTTCGGCTGGCTCGGCGACAAGCTCGGCCGGAAGCGCGTCTATGGCCTCACCCTCATCCTCATGGTCGTCTGTTCCATCGCCTCCGGTCTCTCCTTCAGCAGCTCTCCGACCGCCGTCATCACCACTCTCTGTTTCTTCCGATTCTGGCTTGGCTTCGGAATCGGCGGCGACTACCCTTTATCCGCTACCATCATGGCCGAATACTCCAACAAAAAAACCCGAGGCGCCTTCGTAGCCGCCGTCTTCGCAATGCAGGGATTTGGAATTCTGGCCGGCGGCACGGTAGTAATTGTAATCTCGTCAATTTTCAAGACCCTTTTTAAAGCTCCACCGTAA | 597 | 57.45 | MANDQLQLLTVLDRAKTQFYHFTAVVIAGMGFFTDSYDLFCISLVTKLLGRIYYTVEGSPRPGTLPPAVAAAVNGVALAGTLVGQLFFGWLGDKLGRKRVYGLTLILMVVCSIASGLSFSSSPTAVITTLCFFRFWLGFGIGGDYPLSATIMAEYSNKKTRGAFVAAVFAMQGFGILAGGTVVIVISSIFKTLFKAPP | 198 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 18155511 | 18156107 | - | CcPI632755_08g006850.1 | Cco08g0685 | 185159 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco08g0685 | 198 | Pfam | Sugar (and other) transporter | 26 | 191 | IPR005828 | GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro) | |
Cco08g0685 | 198 | PANTHER | SOLUTE CARRIER FAMILY 22 MEMBER | 15 | 188 | - | - | |
Cco08g0685 | 198 | ProSiteProfiles | Major facilitator superfamily (MFS) profile. | 24 | 198 | IPR020846 | GO:0022857(InterPro) | |
Cco08g0685 | 198 | SUPERFAMILY | MFS general substrate transporter | 12 | 189 | IPR036259 | - | |
Cco08g0685 | 198 | Gene3D | MFS general substrate transporter like domains | 20 | 198 | IPR036259 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco07g0102 | Cco-Chr7:1049884 | Cco08g0685 | Cco-Chr8:18155511 | 2.10E-88 | dispersed | |
Cco08g0685 | Cco-Chr8:18155511 | Cco11g1953 | Cco-Chr11:32071316 | 1.70E-56 | dispersed | |
Cco08g0685 | Cco-Chr8:18155511 | Cco06g0725 | Cco-Chr6:8259503 | 6.40E-88 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco08g0685 | K08176 | - | csv:101205342 | 365.54 |