Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco08g0776 | ATGGGAATTAAGGTAGGTGAGGGAAGAGGCAGTACAGTCGGAAGAGCCGTCGCTGTTGCCGCCGTTATCGGGTTGGTTATAATGTCTCAGTTGGAGAACGTGGAGGCAGCCGTTTACGTTGTCGGCGACTCCGGTGGATGGACTTTTAACGTCCAAGGTTGGCCCAAAGGAAAACGTTTTCGTGCCGGTGATATTCTCAAGTTCAATTACGACTCAACAATTCATAACGTGGTGGTGGTGAACCAAGCTGGGTATACCAACTGCAAAACTCCGGCGGGTGCCAAAGTGTACAAATCCGGCAGCGATCAGATAACATTGCCTAAAGGACAAAGCTATTTCATCTGCAATTTCCCCGGCCACTGTGAGGCCGGCATGAAGATTGCCGAGATTCCACCGCCGTCGTTCCCCGCCGCCACCATCTCAACTGTGCTCCTGCTCCAAGCCTCCAAGGTTCAACTCCTGCAATTCCACGGACGATTCTTCTTTCCTTTTCCCTCTGCCTTTGCTCCCCCTCTTGGGGATGCCGATCAAGAGACCACTCTACGACCGCCTCAACCATCCTCTCCTCCGCCGCCGCTAGTTTCAGAAATTATAATGTCCTCGAGAGATTCTAACGTCCTTTTCAGTGGTGGCGGTATCAGTTTTCTCAATGAAAATCACACTGGAAAGTTCAGCTATGGATATTCTAGTTTCAAGGGCAAAAGGGCTTCGATGGAGGACTTCTATGAAACAAGAATTTCTGAAGTTGATGGTCAGATGGTCGCTTTTTTCGGTGTTTTTGATGGTCATGGAGGTTCCAGAACGGCTGAATACCTTAAGCGCAATCTTTTCAAGAACCTAAGTAGCCATCCAGACTTTATCAAAGACACAAGGACTGCTATTATTGAGGTCTTTAAGCAGACCGATGCCGATTATATCAATGAAGAGAAAGGACAGCAGAAAGATGCTGGGTCAACTGCATCAACTGCTGTATTGTTGGGGGATCGTCTCCTTGTTGCAAATGTTGGGGATTCTAGAGTAGTTGCATCGAGGGCTGGTTCAGCTATTCCCCTCTCTATTGATCACAAACCTGATAGATCAGACGAGCGCGAAAGGATTGAACAAGCTGGAGGGTTCATTCTTTGGGCAGGAACTTGGAGGGTTGGTGGTATTCTAGCAGTTTCGCGTGCCTTTGGAGATAAGCTACTCAAACCATTTGTTGTTGCTGATCCCGAAATTAAGGAAGAAGAACTTGAAGGTGTAGATTTTATTATTATTGCAAGCGATGGACTTTGGAATGTCATCTCAAACGAGGAAGCTGTAGCATTGGTACAACACAACCAAGATGCAGAAATGGCATCAAGAAACCTAATCCAAGAAGCTTATGCTCGAGGGAGTTCTGACAACATTACATGCGTCATTGATGTTCCTGCTCAATCTGTAGATTACTTAATACTTTGCCTTTATGATTATGGCATGCTGATATGTTTTGCTTCAAACTCATGTTGCACATGTCGTTTCAATGGGGTCTCCACGAAAATGGTGAACGATACTGAGTATTACGACATTCTCGGTGTTCGTTCTTCTGCTTCTGAGGAGGAGATTCGTAAGGCCTATTATCTTAAGGCAAAACAAGTCCATCCGGATAAAAATTTGAATGATCCTCAAGCTGCTGAAAGGTTTCAGGCGTTAGGTGAAGCTTATCAAGTGTTGAGTGATGCAGTCCAAAGAGATGCATATGATAGGAATGGGAAACATAGTATTACTAGGGAATCCATGCTTGACCCTACTGCTGTTTTTGCACTTCTATTTGGGAGTGAATTATTTGAGGACTACATTGGACATTTAGCTGTAGCATCAATGGCCTCATCTGAATTAGAAAGCGAAATTGGCAATCCAGAGAGATTACATGATAAGTTGAAGGCAATCCAGAAAGAAAGAGAAGAAAAACTTGCACGTGTACTCGAGGGTTTTCTTAATCAATATGTTCTAGGTGACAAAGACAGATTCTTACGACATGCTGAATCTGAAGCCAAAAGACTTTCTAATGCGGCTTTTGGCGTTAATATATTACACACTATAGGCTACATTTATTCAAGACAAGCAGCACAAGAGCTTGGAAAGAGAGCCATTTATCTTGGTGCTTTTCAGTTGTTACAACTTCAAGATGACATTTGCCGGCAGTTTAAAATGGATGGTAGTGGTCCTGGAAATGATATTGAATCACATATTCAAGCGAATAAAGACACATTCCTCAATTCGTTGTGGAAGCTTAATGTGGTTGACATTGAATTGACACTTATGAATGTGTGCCAGATGGTGCTACGCGATAATACTGTTAGAAAGGAAGAACTAAAAGCTCGTGCCCTGGCTCTGAAGATTCTTGGAAAGATATTCCAGGAGAAGCAGGCACAAAATGGTGGAACGTCAAGAAAGAAAGGTGCTGCTGCAATAGATGACGACGGAACGAGTTCAGAGAGCAGCGATGATGAGGACGATCCCCGAAGGCCGCTATCATATCGAACTCCTTTTCTTACTCAGGCAAGTAGATCAAACTCTTCTCTTTCCACTCAAAAGAGGATCCACTTTATCTCATGTACGTTGAAACTCGCGCGGAAAACTTTGCCCGAATTTTTAATCCAGAAGTCTTCACTTATGAAATTGAAGGCATTTCCAAAAGTAACCAAGCAAGTGTTCAAAACAAATAAGAGGCTTGGCATCTTCATGTCCGTAAGCTACATATTTACACATGAAAAGAAAGGAAAAGCCGACCGAGAGAACGAAGTCCTCATATGTCCAGATTCCCGTTCTTCCGAGCAACATGTACATATACAACCATATCATGATTTTCCGGAGAAGGATGGTGTTCTAGAATAA | 2856 | 43.73 | MGIKVGEGRGSTVGRAVAVAAVIGLVIMSQLENVEAAVYVVGDSGGWTFNVQGWPKGKRFRAGDILKFNYDSTIHNVVVVNQAGYTNCKTPAGAKVYKSGSDQITLPKGQSYFICNFPGHCEAGMKIAEIPPPSFPAATISTVLLLQASKVQLLQFHGRFFFPFPSAFAPPLGDADQETTLRPPQPSSPPPPLVSEIIMSSRDSNVLFSGGGISFLNENHTGKFSYGYSSFKGKRASMEDFYETRISEVDGQMVAFFGVFDGHGGSRTAEYLKRNLFKNLSSHPDFIKDTRTAIIEVFKQTDADYINEEKGQQKDAGSTASTAVLLGDRLLVANVGDSRVVASRAGSAIPLSIDHKPDRSDERERIEQAGGFILWAGTWRVGGILAVSRAFGDKLLKPFVVADPEIKEEELEGVDFIIIASDGLWNVISNEEAVALVQHNQDAEMASRNLIQEAYARGSSDNITCVIDVPAQSVDYLILCLYDYGMLICFASNSCCTCRFNGVSTKMVNDTEYYDILGVRSSASEEEIRKAYYLKAKQVHPDKNLNDPQAAERFQALGEAYQVLSDAVQRDAYDRNGKHSITRESMLDPTAVFALLFGSELFEDYIGHLAVASMASSELESEIGNPERLHDKLKAIQKEREEKLARVLEGFLNQYVLGDKDRFLRHAESEAKRLSNAAFGVNILHTIGYIYSRQAAQELGKRAIYLGAFQLLQLQDDICRQFKMDGSGPGNDIESHIQANKDTFLNSLWKLNVVDIELTLMNVCQMVLRDNTVRKEELKARALALKILGKIFQEKQAQNGGTSRKKGAAAIDDDGTSSESSDDEDDPRRPLSYRTPFLTQASRSNSSLSTQKRIHFISCTLKLARKTLPEFLIQKSSLMKLKAFPKVTKQVFKTNKRLGIFMSVSYIFTHEKKGKADRENEVLICPDSRSSEQHVHIQPYHDFPEKDGVLE | 951 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 19538892 | 19555728 | - | CcPI632755_08g007760.1 | Cco08g0776 | 185250 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco08g0776 | 951 | PANTHER | DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN | 433 | 826 | IPR052423 | - | |
Cco08g0776 | 951 | SMART | dnaj_3 | 511 | 569 | IPR001623 | - | |
Cco08g0776 | 951 | SUPERFAMILY | Chaperone J-domain | 506 | 607 | IPR036869 | - | |
Cco08g0776 | 951 | Pfam | X-domain of DnaJ-containing | 637 | 708 | IPR026894 | - | |
Cco08g0776 | 951 | Pfam | X-domain of DnaJ-containing | 709 | 800 | IPR026894 | - | |
Cco08g0776 | 951 | Pfam | Protein phosphatase 2C | 226 | 463 | IPR001932 | - | |
Cco08g0776 | 951 | MobiDBLite | consensus disorder prediction | 173 | 192 | - | - | |
Cco08g0776 | 951 | ProSitePatterns | PPM-type phosphatase domain signature. | 256 | 264 | IPR000222 | GO:0043169(InterPro) | |
Cco08g0776 | 951 | ProSiteProfiles | PPM-type phosphatase domain profile. | 225 | 470 | IPR001932 | - | |
Cco08g0776 | 951 | Gene3D | - | 37 | 129 | IPR008972 | - | |
Cco08g0776 | 951 | CDD | DnaJ | 512 | 566 | IPR001623 | - | |
Cco08g0776 | 951 | SUPERFAMILY | Cupredoxins | 37 | 127 | IPR008972 | - | |
Cco08g0776 | 951 | SMART | PP2C_4 | 215 | 468 | IPR001932 | - | |
Cco08g0776 | 951 | Gene3D | DnaJ domain | 501 | 591 | IPR036869 | - | |
Cco08g0776 | 951 | PRINTS | DnaJ domain signature | 514 | 532 | IPR001623 | - | |
Cco08g0776 | 951 | PRINTS | DnaJ domain signature | 532 | 547 | IPR001623 | - | |
Cco08g0776 | 951 | PRINTS | DnaJ domain signature | 569 | 588 | IPR001623 | - | |
Cco08g0776 | 951 | PRINTS | DnaJ domain signature | 549 | 569 | IPR001623 | - | |
Cco08g0776 | 951 | CDD | PP2Cc | 224 | 467 | IPR001932 | - | |
Cco08g0776 | 951 | MobiDBLite | consensus disorder prediction | 799 | 836 | - | - | |
Cco08g0776 | 951 | Pfam | DnaJ domain | 512 | 574 | IPR001623 | - | |
Cco08g0776 | 951 | Pfam | Plastocyanin-like domain | 47 | 125 | IPR003245 | GO:0009055(InterPro) | |
Cco08g0776 | 951 | FunFam | basic blue protein-like | 37 | 130 | - | - | |
Cco08g0776 | 951 | ProSitePatterns | Type-1 copper (blue) proteins signature. | 109 | 125 | IPR028871 | - | |
Cco08g0776 | 951 | ProSitePatterns | Nt-dnaJ domain signature. | 554 | 573 | IPR018253 | - | |
Cco08g0776 | 951 | ProSiteProfiles | dnaJ domain profile. | 512 | 577 | IPR001623 | - | |
Cco08g0776 | 951 | CDD | Plantacyanin | 37 | 131 | IPR041844 | - | |
Cco08g0776 | 951 | Gene3D | - | 216 | 471 | IPR036457 | - | |
Cco08g0776 | 951 | ProSiteProfiles | Phytocyanin domain profile. | 37 | 133 | IPR003245 | GO:0009055(InterPro) | |
Cco08g0776 | 951 | SUPERFAMILY | PP2C-like | 222 | 467 | IPR036457 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco05g1146 | Cco-Chr5:10511803 | Cco08g0776 | Cco-Chr8:19538892 | 2.40E-32 | dispersed | |
Cco05g1148 | Cco-Chr5:10531377 | Cco08g0776 | Cco-Chr8:19538892 | 1.40E-37 | dispersed | |
Cco05g1832 | Cco-Chr5:27225870 | Cco08g0776 | Cco-Chr8:19538892 | 1.60E-95 | dispersed | |
Cco08g0776 | Cco-Chr8:19538892 | Cco11g1979 | Cco-Chr11:32232129 | 1.60E-96 | dispersed | |
Cco08g0776 | Cco-Chr8:19538892 | Cco07g0249 | Cco-Chr7:2544210 | 5.90E-46 | transposed | |
Cco08g0776 | Cco-Chr8:19538892 | Cco11g1844 | Cco-Chr11:31126697 | 5.90E-46 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco08g0776 | - | - | - | 0.0 |