Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco08g0780 | ATGGTAACATCGGGGCCACCCACTCCTATGGGTGGTGGTGCGCAGTCTGTTTCACCCTCACTTCTGCGATCTAATTCTGGATTGCTGGGAGTTCAAGGTGGTCTGCTTCCTTCTCAGGCAGCCTTTTCTTCAATTGTATCGCCCCGGAATCAGTTCAATAATATGAATATGCTTGGTAATATGTCCAATGTGTCATCTCTCCTTAATCAATCATTTGGGAATGGGGCTCCTAATGCACATCCTGGTGCGGAGCCGGACCCTCTTTCTGGTGTTGGCAACGGAATGAACTTCAATAATCCTTCATCATCCTTTGTAGCATCCAATATGGCAAACCCCGTTTCGTCTGTCCAAGGGCAGAATCCTCAATTTTCTAACCTTCCTAGCAGCCAGTTGTTATCAGATCAGCAGCAGTCGCAACAACTAGAACCCCAGAACTTCCAACATGGTCAGCAGTCTATGGAACAGTTTTCTGCACTTCAGAGCAATCAACAACCACAATTTCAAGCAATGCGAGGGTTGACTGGTGTTGGACCTGTAAAGTTGGAGCCTCAAGTGATGAGCAATGATCAACATGGACAGCAGCAGCAGCAGCATTTGCAAACTTTGAGAAACCTTGGTCCAGTGAAATTGGAATCACAACGGCTTCAGTCGATGAGAGGTTTGGCACCAGTAAAAATGGAACCCCAACAATCGGACCAGTCATTATTTCAGCAGCAGCAGCAACAACAACATCAACATCAACATCAGCATCAGCATCCACATCAGCAACAACAGCAATCGCAACAATTTCTCCATATGTCTAGACAGTCCTCTCAGGCAGCGGCTGCCCAAATTAATCTAATGCACCAACAAAGGTTTTTGCAATTGCAACAACAACATCAGCAACATCTCCTAAAAAGTATGCCTCCTCAACGGCCACAATTGCAACAACATTACCAACAGCAGAACCTTTCTCTGAGATCTCCTGTTAAACCAGGATATGAACCTGGAATGTGTGCCCGGCGTCTGACTCATTACATGTATCACCAGCAACACAGACCTGAAGATAACAACATAGATTTCTGGAGGAAATTTGTTAACGAGTACTTTGCACCTCATGCCAAAAAGAAATGGTGTGTGTCCATGTATGGAAGTGGACGACAAACAACAGGAGTTTTTCCTCAGGATGTATGGCATTGTGAAATATGCAACCGCAAGCCTGGACGTGGCTTTGAAGCTACTGCTGAAGTTCTTCCCAGGCTTTTTAAGATCAAGTATGAAAGTGGTACTATGGAGGAACTACTTTATCTTGACATGCCTCGTGAATATCATAATGCATCTGGTCAGATTGTCTTGGATTATGCAAAAGCGATACAGGAAAGTGTTTTTGAGCAACTTCGTGTTGTCCGCGATGGCCAACTTCGAATTGTTTTTTCTCCAGACCTTAAGATATGTTCATGGGAATTCTGTGCTCGACGCCATGAAGAACTTATTCCTAGGAGATTATTGATACCTCAGGTTAGTCACCTTGGAGCAGCAGCTCAAAAGTACCAGTCTGCCATTCAAAACGCATCATCCAATTTATCAACTCCCGAATTGCAAAACAATTGTAACATGTTTGTGGCTTCAGCACGGCAATTAGCTAAAGCCTTGGAAGTTCCACTGGTAAATGACTTGGGATATACAAAGAGATACGTACGTTGTCTTCAGATATCCGAAGTGGTTAATAGCATGAAGGACTTGATTGATTACAGCAAAGAAACAGGGATTGGGCCAATGGATAGTCTAGCCAAGTTTCCTCGGAGGACTAGTTCATCATCGGGGTTTACAAATCAAGCTCAAATTTCTGATGAGCAGCAGCAACAGCAATCATCCATAGCCCAGCACTCGAATAACAACCAGAGTTCTGTCCAGGCTTCTGCGGTGCAGCAGCTTACAGCTAGCAATGGTGTGACCAGTGTAAATAACCCCGCCAACCAACCTTCAACATCAAACTCAGCAAGCACCATTGCTGGTCTTCTTCACCAAAATTCTATGAACTCAAGACAGCAGAACTCTATGGCTAATGCTAGCAACTCATATGGGGGAAGTAATGTTCAGATTCCATCTCCTGGGTCTTCCAGTACAATTCCACCTACGCAACCGAACCCTTCTACATTCCAGCCACCGACTCCCTCATCATCTAACAATCTTTCACAACCATCGCATGCAGCTGCAAAGAATGCCAATCAAATGAGTGCTGCCAATTCTCCGGCAAATATCTCTATGCAACAACCCGCCTTATCTGGAGATGCTGATCCTAGTGATACACAATCCTCAGTGCAAAAGATCTTACAAGAGATGATGATGAATAATCATATGAACGGGCCGAATAGTCTGGTTGGTGTCGGTTCGGTGGTCAATGATATGAAAAATGTGAATGGGGTCTTACCTACAAGTAGTACAGGTCTCAACAATGGGAATTGCATAGGCGGAAACGGAGCAACAAACGGTGGCTCAGGGATGGGAGGAGGTGGATATGGATCAATGGGGAGCGGGCTTGGGCAGCCTGCCATGGTTAATGGAATGAGAACTGCAATGGGAAATAACTCCATTATGAATAGACGAATAGGAATGGCATCGTTCGCTCTAGAACAAAGCATGAATGGTCAACCTCAGGATTTGGGAAACCAGCTTCTTAGTGGATTAGGAGCTGTAAATGGCTTTAGCAATCTCCAATTTGACTGGAAGCCATCCCCATGA | 2721 | 44.87 | MVTSGPPTPMGGGAQSVSPSLLRSNSGLLGVQGGLLPSQAAFSSIVSPRNQFNNMNMLGNMSNVSSLLNQSFGNGAPNAHPGAEPDPLSGVGNGMNFNNPSSSFVASNMANPVSSVQGQNPQFSNLPSSQLLSDQQQSQQLEPQNFQHGQQSMEQFSALQSNQQPQFQAMRGLTGVGPVKLEPQVMSNDQHGQQQQQHLQTLRNLGPVKLESQRLQSMRGLAPVKMEPQQSDQSLFQQQQQQQHQHQHQHQHPHQQQQQSQQFLHMSRQSSQAAAAQINLMHQQRFLQLQQQHQQHLLKSMPPQRPQLQQHYQQQNLSLRSPVKPGYEPGMCARRLTHYMYHQQHRPEDNNIDFWRKFVNEYFAPHAKKKWCVSMYGSGRQTTGVFPQDVWHCEICNRKPGRGFEATAEVLPRLFKIKYESGTMEELLYLDMPREYHNASGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSHLGAAAQKYQSAIQNASSNLSTPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSKETGIGPMDSLAKFPRRTSSSSGFTNQAQISDEQQQQQSSIAQHSNNNQSSVQASAVQQLTASNGVTSVNNPANQPSTSNSASTIAGLLHQNSMNSRQQNSMANASNSYGGSNVQIPSPGSSSTIPPTQPNPSTFQPPTPSSSNNLSQPSHAAAKNANQMSAANSPANISMQQPALSGDADPSDTQSSVQKILQEMMMNNHMNGPNSLVGVGSVVNDMKNVNGVLPTSSTGLNNGNCIGGNGATNGGSGMGGGGYGSMGSGLGQPAMVNGMRTAMGNNSIMNRRIGMASFALEQSMNGQPQDLGNQLLSGLGAVNGFSNLQFDWKPSP | 906 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 19601603 | 19607878 | - | CcPI632755_08g007800.1 | Cco08g0780 | 185254 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco08g0780 | 906 | MobiDBLite | consensus disorder prediction | 585 | 635 | - | - | |
Cco08g0780 | 906 | MobiDBLite | consensus disorder prediction | 674 | 739 | - | - | |
Cco08g0780 | 906 | MobiDBLite | consensus disorder prediction | 701 | 715 | - | - | |
Cco08g0780 | 906 | MobiDBLite | consensus disorder prediction | 92 | 152 | - | - | |
Cco08g0780 | 906 | MobiDBLite | consensus disorder prediction | 716 | 739 | - | - | |
Cco08g0780 | 906 | MobiDBLite | consensus disorder prediction | 225 | 274 | - | - | |
Cco08g0780 | 906 | MobiDBLite | consensus disorder prediction | 72 | 152 | - | - | |
Cco08g0780 | 906 | MobiDBLite | consensus disorder prediction | 227 | 274 | - | - | |
Cco08g0780 | 906 | MobiDBLite | consensus disorder prediction | 674 | 700 | - | - | |
Cco08g0780 | 906 | MobiDBLite | consensus disorder prediction | 592 | 635 | - | - | |
Cco08g0780 | 906 | Pfam | LIM-domain binding protein | 335 | 589 | IPR029005 | - | |
Cco08g0780 | 906 | PANTHER | LIM DOMAIN-BINDING PROTEIN | 1 | 897 | IPR029005 | GO:0000122(PANTHER)|GO:0005634(PANTHER)|GO:0005667(PANTHER)|GO:0045944(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco08g0421 | Cco-Chr8:9877436 | Cco08g0780 | Cco-Chr8:19601603 | 2.20E-276 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco08g0780 | - | - | - | 0.0 |