Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco08g0780 ATGGTAACATCGGGGCCACCCACTCCTATGGGTGGTGGTGCGCAGTCTGTTTCACCCTCACTTCTGCGATCTAATTCTGGATTGCTGGGAGTTCAAGGTGGTCTGCTTCCTTCTCAGGCAGCCTTTTCTTCAATTGTATCGCCCCGGAATCAGTTCAATAATATGAATATGCTTGGTAATATGTCCAATGTGTCATCTCTCCTTAATCAATCATTTGGGAATGGGGCTCCTAATGCACATCCTGGTGCGGAGCCGGACCCTCTTTCTGGTGTTGGCAACGGAATGAACTTCAATAATCCTTCATCATCCTTTGTAGCATCCAATATGGCAAACCCCGTTTCGTCTGTCCAAGGGCAGAATCCTCAATTTTCTAACCTTCCTAGCAGCCAGTTGTTATCAGATCAGCAGCAGTCGCAACAACTAGAACCCCAGAACTTCCAACATGGTCAGCAGTCTATGGAACAGTTTTCTGCACTTCAGAGCAATCAACAACCACAATTTCAAGCAATGCGAGGGTTGACTGGTGTTGGACCTGTAAAGTTGGAGCCTCAAGTGATGAGCAATGATCAACATGGACAGCAGCAGCAGCAGCATTTGCAAACTTTGAGAAACCTTGGTCCAGTGAAATTGGAATCACAACGGCTTCAGTCGATGAGAGGTTTGGCACCAGTAAAAATGGAACCCCAACAATCGGACCAGTCATTATTTCAGCAGCAGCAGCAACAACAACATCAACATCAACATCAGCATCAGCATCCACATCAGCAACAACAGCAATCGCAACAATTTCTCCATATGTCTAGACAGTCCTCTCAGGCAGCGGCTGCCCAAATTAATCTAATGCACCAACAAAGGTTTTTGCAATTGCAACAACAACATCAGCAACATCTCCTAAAAAGTATGCCTCCTCAACGGCCACAATTGCAACAACATTACCAACAGCAGAACCTTTCTCTGAGATCTCCTGTTAAACCAGGATATGAACCTGGAATGTGTGCCCGGCGTCTGACTCATTACATGTATCACCAGCAACACAGACCTGAAGATAACAACATAGATTTCTGGAGGAAATTTGTTAACGAGTACTTTGCACCTCATGCCAAAAAGAAATGGTGTGTGTCCATGTATGGAAGTGGACGACAAACAACAGGAGTTTTTCCTCAGGATGTATGGCATTGTGAAATATGCAACCGCAAGCCTGGACGTGGCTTTGAAGCTACTGCTGAAGTTCTTCCCAGGCTTTTTAAGATCAAGTATGAAAGTGGTACTATGGAGGAACTACTTTATCTTGACATGCCTCGTGAATATCATAATGCATCTGGTCAGATTGTCTTGGATTATGCAAAAGCGATACAGGAAAGTGTTTTTGAGCAACTTCGTGTTGTCCGCGATGGCCAACTTCGAATTGTTTTTTCTCCAGACCTTAAGATATGTTCATGGGAATTCTGTGCTCGACGCCATGAAGAACTTATTCCTAGGAGATTATTGATACCTCAGGTTAGTCACCTTGGAGCAGCAGCTCAAAAGTACCAGTCTGCCATTCAAAACGCATCATCCAATTTATCAACTCCCGAATTGCAAAACAATTGTAACATGTTTGTGGCTTCAGCACGGCAATTAGCTAAAGCCTTGGAAGTTCCACTGGTAAATGACTTGGGATATACAAAGAGATACGTACGTTGTCTTCAGATATCCGAAGTGGTTAATAGCATGAAGGACTTGATTGATTACAGCAAAGAAACAGGGATTGGGCCAATGGATAGTCTAGCCAAGTTTCCTCGGAGGACTAGTTCATCATCGGGGTTTACAAATCAAGCTCAAATTTCTGATGAGCAGCAGCAACAGCAATCATCCATAGCCCAGCACTCGAATAACAACCAGAGTTCTGTCCAGGCTTCTGCGGTGCAGCAGCTTACAGCTAGCAATGGTGTGACCAGTGTAAATAACCCCGCCAACCAACCTTCAACATCAAACTCAGCAAGCACCATTGCTGGTCTTCTTCACCAAAATTCTATGAACTCAAGACAGCAGAACTCTATGGCTAATGCTAGCAACTCATATGGGGGAAGTAATGTTCAGATTCCATCTCCTGGGTCTTCCAGTACAATTCCACCTACGCAACCGAACCCTTCTACATTCCAGCCACCGACTCCCTCATCATCTAACAATCTTTCACAACCATCGCATGCAGCTGCAAAGAATGCCAATCAAATGAGTGCTGCCAATTCTCCGGCAAATATCTCTATGCAACAACCCGCCTTATCTGGAGATGCTGATCCTAGTGATACACAATCCTCAGTGCAAAAGATCTTACAAGAGATGATGATGAATAATCATATGAACGGGCCGAATAGTCTGGTTGGTGTCGGTTCGGTGGTCAATGATATGAAAAATGTGAATGGGGTCTTACCTACAAGTAGTACAGGTCTCAACAATGGGAATTGCATAGGCGGAAACGGAGCAACAAACGGTGGCTCAGGGATGGGAGGAGGTGGATATGGATCAATGGGGAGCGGGCTTGGGCAGCCTGCCATGGTTAATGGAATGAGAACTGCAATGGGAAATAACTCCATTATGAATAGACGAATAGGAATGGCATCGTTCGCTCTAGAACAAAGCATGAATGGTCAACCTCAGGATTTGGGAAACCAGCTTCTTAGTGGATTAGGAGCTGTAAATGGCTTTAGCAATCTCCAATTTGACTGGAAGCCATCCCCATGA 2721 44.87 MVTSGPPTPMGGGAQSVSPSLLRSNSGLLGVQGGLLPSQAAFSSIVSPRNQFNNMNMLGNMSNVSSLLNQSFGNGAPNAHPGAEPDPLSGVGNGMNFNNPSSSFVASNMANPVSSVQGQNPQFSNLPSSQLLSDQQQSQQLEPQNFQHGQQSMEQFSALQSNQQPQFQAMRGLTGVGPVKLEPQVMSNDQHGQQQQQHLQTLRNLGPVKLESQRLQSMRGLAPVKMEPQQSDQSLFQQQQQQQHQHQHQHQHPHQQQQQSQQFLHMSRQSSQAAAAQINLMHQQRFLQLQQQHQQHLLKSMPPQRPQLQQHYQQQNLSLRSPVKPGYEPGMCARRLTHYMYHQQHRPEDNNIDFWRKFVNEYFAPHAKKKWCVSMYGSGRQTTGVFPQDVWHCEICNRKPGRGFEATAEVLPRLFKIKYESGTMEELLYLDMPREYHNASGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSHLGAAAQKYQSAIQNASSNLSTPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSKETGIGPMDSLAKFPRRTSSSSGFTNQAQISDEQQQQQSSIAQHSNNNQSSVQASAVQQLTASNGVTSVNNPANQPSTSNSASTIAGLLHQNSMNSRQQNSMANASNSYGGSNVQIPSPGSSSTIPPTQPNPSTFQPPTPSSSNNLSQPSHAAAKNANQMSAANSPANISMQQPALSGDADPSDTQSSVQKILQEMMMNNHMNGPNSLVGVGSVVNDMKNVNGVLPTSSTGLNNGNCIGGNGATNGGSGMGGGGYGSMGSGLGQPAMVNGMRTAMGNNSIMNRRIGMASFALEQSMNGQPQDLGNQLLSGLGAVNGFSNLQFDWKPSP 906
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 19601603 19607878 - CcPI632755_08g007800.1 Cco08g0780 185254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco08g0780 906 MobiDBLite consensus disorder prediction 585 635 - -
Cco08g0780 906 MobiDBLite consensus disorder prediction 674 739 - -
Cco08g0780 906 MobiDBLite consensus disorder prediction 701 715 - -
Cco08g0780 906 MobiDBLite consensus disorder prediction 92 152 - -
Cco08g0780 906 MobiDBLite consensus disorder prediction 716 739 - -
Cco08g0780 906 MobiDBLite consensus disorder prediction 225 274 - -
Cco08g0780 906 MobiDBLite consensus disorder prediction 72 152 - -
Cco08g0780 906 MobiDBLite consensus disorder prediction 227 274 - -
Cco08g0780 906 MobiDBLite consensus disorder prediction 674 700 - -
Cco08g0780 906 MobiDBLite consensus disorder prediction 592 635 - -
Cco08g0780 906 Pfam LIM-domain binding protein 335 589 IPR029005 -
Cco08g0780 906 PANTHER LIM DOMAIN-BINDING PROTEIN 1 897 IPR029005 GO:0000122(PANTHER)|GO:0005634(PANTHER)|GO:0005667(PANTHER)|GO:0045944(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco08g0421 Cco-Chr8:9877436 Cco08g0780 Cco-Chr8:19601603 2.20E-276 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco08g0780 - - - 0.0