Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco08g0831 ATGGATCCCAACAAATTAAACCTAAGTACTTTGGAGCAACAATCCAATTTGGAGATCCAAACAAAGGAATTCGACTACTCGAAACGTGCACAATGGCTACGTGCTGCCGTGCTTGGTGCCAACGACGGGCTCGTCTCGACCGCGTCGCTTATGATGGGAGTTGGAGCTGTGAAACAAGACATCAAGGCCATGATCCTCACTGGTTTCGCCGGGCTAGTCGCGGGGGCGTGTAGTATGGCGATCGGGGAGTTTGTGTCTGTTTACTCTCAATTAGACATTGAAATGGCTCAAATAAAAAGAGAGAAATTACAAAGTAGTAATATAGAAGGAGGAGTACGAGGGCAAGAGAGCAAAGATGAAGAAAAATTACCAAATCCACTTCAAGCAGCTGCAGCCTCTGCCTTAGCTTTCTCTCTAGGAGCAATGGTGCCATTATTGGCAGCTTCCTTTATAAGAGAATATAAAGTAAGGCTGGCGGTGGTTGTGGCGGCGGTGACGTTAGCTCTCGTCATGTTCGGGTGGTTGGGCGCCGTCCTTGGAAAAGCATCACCGATCAAATCGGCCGCTAGAGTGTTGGTCGGAGGTTGGTTAGCTATGGCTATAACGTTTGGCTTGACAAAGCTAATCGGAGCAAGCGGACTCTAG 645 48.37 MDPNKLNLSTLEQQSNLEIQTKEFDYSKRAQWLRAAVLGANDGLVSTASLMMGVGAVKQDIKAMILTGFAGLVAGACSMAIGEFVSVYSQLDIEMAQIKREKLQSSNIEGGVRGQESKDEEKLPNPLQAAAASALAFSLGAMVPLLAASFIREYKVRLAVVVAAVTLALVMFGWLGAVLGKASPIKSAARVLVGGWLAMAITFGLTKLIGASGL 214
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 20149500 20150144 + CcPI632755_08g008310.1 Cco08g0831 185305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco08g0831 214 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 11 210 IPR008217 GO:0005381(PANTHER)|GO:0005384(InterPro)|GO:0005384(PANTHER)|GO:0006880(PANTHER)|GO:0016020(PANTHER)|GO:0030026(PANTHER)|GO:0030026(InterPro)
Cco08g0831 214 Pfam VIT family 119 206 IPR008217 GO:0005384(InterPro)|GO:0030026(InterPro)
Cco08g0831 214 Pfam VIT family 33 106 IPR008217 GO:0005384(InterPro)|GO:0030026(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco08g0831 Cco-Chr8:20149500 Cco09g0964 Cco-Chr9:9085486 1.30E-73 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco08g0831 K22736 - csv:116402413 356.681