Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco08g0831 | ATGGATCCCAACAAATTAAACCTAAGTACTTTGGAGCAACAATCCAATTTGGAGATCCAAACAAAGGAATTCGACTACTCGAAACGTGCACAATGGCTACGTGCTGCCGTGCTTGGTGCCAACGACGGGCTCGTCTCGACCGCGTCGCTTATGATGGGAGTTGGAGCTGTGAAACAAGACATCAAGGCCATGATCCTCACTGGTTTCGCCGGGCTAGTCGCGGGGGCGTGTAGTATGGCGATCGGGGAGTTTGTGTCTGTTTACTCTCAATTAGACATTGAAATGGCTCAAATAAAAAGAGAGAAATTACAAAGTAGTAATATAGAAGGAGGAGTACGAGGGCAAGAGAGCAAAGATGAAGAAAAATTACCAAATCCACTTCAAGCAGCTGCAGCCTCTGCCTTAGCTTTCTCTCTAGGAGCAATGGTGCCATTATTGGCAGCTTCCTTTATAAGAGAATATAAAGTAAGGCTGGCGGTGGTTGTGGCGGCGGTGACGTTAGCTCTCGTCATGTTCGGGTGGTTGGGCGCCGTCCTTGGAAAAGCATCACCGATCAAATCGGCCGCTAGAGTGTTGGTCGGAGGTTGGTTAGCTATGGCTATAACGTTTGGCTTGACAAAGCTAATCGGAGCAAGCGGACTCTAG | 645 | 48.37 | MDPNKLNLSTLEQQSNLEIQTKEFDYSKRAQWLRAAVLGANDGLVSTASLMMGVGAVKQDIKAMILTGFAGLVAGACSMAIGEFVSVYSQLDIEMAQIKREKLQSSNIEGGVRGQESKDEEKLPNPLQAAAASALAFSLGAMVPLLAASFIREYKVRLAVVVAAVTLALVMFGWLGAVLGKASPIKSAARVLVGGWLAMAITFGLTKLIGASGL | 214 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 20149500 | 20150144 | + | CcPI632755_08g008310.1 | Cco08g0831 | 185305 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco08g0831 | 214 | PANTHER | FE(2+)/MN(2+) TRANSPORTER PCL1 | 11 | 210 | IPR008217 | GO:0005381(PANTHER)|GO:0005384(InterPro)|GO:0005384(PANTHER)|GO:0006880(PANTHER)|GO:0016020(PANTHER)|GO:0030026(PANTHER)|GO:0030026(InterPro) | |
Cco08g0831 | 214 | Pfam | VIT family | 119 | 206 | IPR008217 | GO:0005384(InterPro)|GO:0030026(InterPro) | |
Cco08g0831 | 214 | Pfam | VIT family | 33 | 106 | IPR008217 | GO:0005384(InterPro)|GO:0030026(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco08g0831 | Cco-Chr8:20149500 | Cco09g0964 | Cco-Chr9:9085486 | 1.30E-73 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco08g0831 | K22736 | - | csv:116402413 | 356.681 |