Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco08g0923 ATGGAGGTTTCCGGCAGCGGCGGCGGAGGAAATTCATCTAGCGAGAAACGGCGTCGTTCGCTCAGAGAAATCACGACCTCCTTCTTCATCGACGTACTAACCGGACCTTGGTTCATGGTGTTCGCTTCATTCCTCGTCATGTCCACCGCCGGAACGCCGTACATGTTCGGACTTTACTCCGGCGCCATAAAATCCGTCCTCGGCTACGATCAGAGCACTCTGAATCTAATCAGTTTTTTCAAAGACCTAGGAACGAACGTCGGCGTAATTTCCGGCCTAATCGCCGAAATTACGCCGCCGTGGGTGGTTCTAGCGATCGGCGCGGCGATGAACTTCGTCGGATACTTCATGATTTGGTTATCGGTGACGGAAAAAGTGGCGGCGCCAACGGTGTGGCTGATGTGTCTTTACATTTGCTTAGGGGCAAATTCGACGGCGTTTGCGAACACCGGGGCTTTAGTGACTTGTGTGAAGAATTATCCGGCGAGAAGAGGAGCGGTTTTAGGGATTTTGAAAGGATATGTTGGATTAAGCGGAGCAATTTTGACGCAATTCTATCATGCGATTTATGGTGATGATTCGAAATCGTTGATTCTTCTTATTGCTTGGCTTCCGGCGGTTATTTCTGTGGTGTTCTTGAGGACGATTCGGGTTATGAAGGTTCAACATCAGCCTAATGAACTCACAATTTTCTACAGGTTCTTGTACATTTCTCTTGGCCTAGCCGGATTTCTCATGGTGATGATCGTTCTTCAGCAGAAATTCAAATTCTCCCACATCGAATACAGTTCCAGCGCCGCCGTCGTCGTCTTTCTCCTCTTCTTTCCGATCTTCATCGTCATCGCCGAAGATTACAAATTCTGGCGCAAAAAGCTATCTCAACTCCAAAATCCTTCTCCACTCACCATCATCGCTCAAAAACCGCCGCCGTCGCAACAGTTCCCAATCAACCTCGAAACCTCCAACACATCTCCCGCCGGACAACCAAAGTCACAAACGCTATCCTGCTGGAGAACCGCCCTAAATCCGCCGCCAAGAGGCGAAGATTACACGATTCTACAAGCGCTCTTTAGCGCCGACATGCTCCTCCTATTCCTCTCCACCGCGTGCGGCGTCGGCGGCACTCTCACCGCCATCGACAACCTCGGCCAAATCGGCGCTTCTCTACGGTATCCTAAACAGAGCATTAGCACATTTGTATCATTAGTCAGTATTTGGAATTACCTAGGGCGCGTAGTTTCGGGTTTCACCTCAGAAATTTTCCTCACCAAATACAAATTCCCACGAACCTTAATTCTAACCCTAATTCTCCTCCTCTCTTGCGTCGGCCACCTCCTAATCGCCTTCAATCCTCCCGGCGGCCTCTACTTCGCTTCAATCGTCATCGGATTCTGCTACGGCGCTCAATGGCCGATTCTATTCGCCATAATTTCCGAGATCTTCGGCCTCAAATACTACTCGACACTTTACAATTTCGGATCCGCCGCGAGTCCGATCGGGTTGTATTTCGTCAATGTTCGAGTCGCCGGACATTTGTACGACAAGGAGGCCGACCGGCAAATGGTGGCGGCCGGGAGGACGAGGATAGCCGGAGAAGAGTTGAACTGCGTTGGCGTTAATTGCTTTAAAATGTCGTTCATTATAATCACCGGAGTTACTTTAATTGGAGCTCTGTTTTCATTCATTTTGGTTCTTAGAACCAAAGGTTTTTATAAGACTGATATTTATAGGAGGTTTAGGGATGAGGTTGAAGAAGAAGCAGCTGCTGGAAACGACGTCGTTTCAAATGATGATAGAAATGTAGAAGGCAACAAGTAA 1818 48.73 MEVSGSGGGGNSSSEKRRRSLREITTSFFIDVLTGPWFMVFASFLVMSTAGTPYMFGLYSGAIKSVLGYDQSTLNLISFFKDLGTNVGVISGLIAEITPPWVVLAIGAAMNFVGYFMIWLSVTEKVAAPTVWLMCLYICLGANSTAFANTGALVTCVKNYPARRGAVLGILKGYVGLSGAILTQFYHAIYGDDSKSLILLIAWLPAVISVVFLRTIRVMKVQHQPNELTIFYRFLYISLGLAGFLMVMIVLQQKFKFSHIEYSSSAAVVVFLLFFPIFIVIAEDYKFWRKKLSQLQNPSPLTIIAQKPPPSQQFPINLETSNTSPAGQPKSQTLSCWRTALNPPPRGEDYTILQALFSADMLLLFLSTACGVGGTLTAIDNLGQIGASLRYPKQSISTFVSLVSIWNYLGRVVSGFTSEIFLTKYKFPRTLILTLILLLSCVGHLLIAFNPPGGLYFASIVIGFCYGAQWPILFAIISEIFGLKYYSTLYNFGSAASPIGLYFVNVRVAGHLYDKEADRQMVAAGRTRIAGEELNCVGVNCFKMSFIIITGVTLIGALFSFILVLRTKGFYKTDIYRRFRDEVEEEAAAGNDVVSNDDRNVEGNK 605
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 21147416 21150970 + CcPI632755_08g009230.1 Cco08g0923 185397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco08g0923 605 Gene3D MFS general substrate transporter like domains 356 572 IPR036259 -
Cco08g0923 605 SUPERFAMILY MFS general substrate transporter 230 570 IPR036259 -
Cco08g0923 605 Pfam Nodulin-like 36 281 IPR010658 -
Cco08g0923 605 SUPERFAMILY MFS general substrate transporter 39 283 IPR036259 -
Cco08g0923 605 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 36 580 - GO:0016020(PANTHER)
Cco08g0923 605 CDD MFS_Mch1p_like 35 557 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco05g2391 Cco-Chr5:32391771 Cco08g0923 Cco-Chr8:21147416 2.60E-217 dispersed
Cco08g0923 Cco-Chr8:21147416 Cco10g1986 Cco-Chr10:33376859 7.10E-130 dispersed
Cco10g1983 Cco-Chr10:33350382 Cco08g0923 Cco-Chr8:21147416 1.10E-193 wgd
Cco05g2390 Cco-Chr5:32381704 Cco08g0923 Cco-Chr8:21147416 3.30E-217 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco08g0923 - - - 0.0