Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cco08g0953 ATGGCGTCTTCTTCTTCTTTCTCCGATCAATACCTCCAACTTTTCTTTTCACTTTTGGCCTTCGCTCTCTCTGCATTCATCTTCTTCCTCGCTCAAAAACGCACCTCGAAGCCACGACTCAACCTCCCGCCGGGACCCCGCGGCTGGCCGGTCGTCGGAAACCTCTTCCAGGTCGCTCGCTCCGGCAAGCATTTCTTCGAATACATTGAAGACATCCGCCAGATTTACGGCCCAATCTTTACTCTCCAGATGGGCTCTCGCACCATGATCATCTTGTCCGGCGCCGACCTCATTCACGAAGCCTTAATCAAGCGCGGCCCTGCTTTCGCTAGCCGCCCCGCCGAGAATCCCACTCGAATCATCTTCAGCAGCAACAAATTCTCCGTTAACGCCGCCGTCTACGGCTCCCTCTGGCGCTCCCTCCGCCGAAACATGGTCGAAAACATGCTCTCTTCTACCCGCTTGAAGGAGTTCCGCGATGTCAGAAAGAACGCCATGGATAAGCTTGTTCAACGCATTCGAACCGACGCCGCTGCCAACGGCGGCGCGGTTTGGGTGTTGAAGAATGCTCGATTCGCTGTGTTCTGTATTCTCTTGGCGATGTGCTTCGGATTAGAAATGGATGAGGAATCGGTTGAGAAAATGGATCAAGTTCTTAAAACTGTTCTGATCACCGTCGATCCGAGAATCGACGATTTTCTCCCGATTTTGAGGCCATTTTTCTCCAAACAGAGGAAACGCGCCATGGAAGTAAGAACGGAGCAAATCGAATTCGTCGTACAGTTCATCAATCGAAGGAAGAAAGCACTTCAAAATCCAGGTTCAGACATTACCGCAACTTCATTTTCGTACCTCGATACGCTCTTCGATCTCAAGGTCGACGGCCGGAAATCTTCCCCGACAGACGCCGAATTAGTCACTCTCTGTTCCGAATTCCTCAACGGCGGCACCGACACGACGGCGACAGCCATCGAATGGGGAATAGCAGAGCTAATCACAAACCCTAACATCCAGAAAAAACTACACGAAGAAATCAAGCAATTAGTAGGCGATAGAAAAGTAGACGAATCTGATATTGAGAAATTGCCTTATCTTCAAGCAGTAGTGAAGGAATTGCTGAGAAGGCATCCGCCGACGTACTTTTCGCTGACACATTCGGCGATCGAGGCGACAAAATTGGCCGGATACGACATTCCAATGGAGGCGAATGTGGAGGTTTATTTGGCCGGAATCAGCAACGATCCGAAACTATGGAAGAATCCGGAGAAATTCGAGCCAGAGAGATTCATGTCCGGCGAGGAAGAGGTGGATATGACGGGGATTAAAGGAATGAAAATGATTCCGTTCGGAGTTGGGCGGAGAATTTGCCCTGGTTTGGGAATGGCGACGATTCACGTTCATCTGATGTTGGCGAGGTTGGTTCAGGAATTTGAATGGAGTTCATATCCGCCGAACAGTAAATTGGATTTTACGAAGAAGTATGAATTTACTGTTGTGATGAAGAATTCTCTCAGAGCCATTGCCACAGACAGAGCTTGA 1539 49.58 MASSSSFSDQYLQLFFSLLAFALSAFIFFLAQKRTSKPRLNLPPGPRGWPVVGNLFQVARSGKHFFEYIEDIRQIYGPIFTLQMGSRTMIILSGADLIHEALIKRGPAFASRPAENPTRIIFSSNKFSVNAAVYGSLWRSLRRNMVENMLSSTRLKEFRDVRKNAMDKLVQRIRTDAAANGGAVWVLKNARFAVFCILLAMCFGLEMDEESVEKMDQVLKTVLITVDPRIDDFLPILRPFFSKQRKRAMEVRTEQIEFVVQFINRRKKALQNPGSDITATSFSYLDTLFDLKVDGRKSSPTDAELVTLCSEFLNGGTDTTATAIEWGIAELITNPNIQKKLHEEIKQLVGDRKVDESDIEKLPYLQAVVKELLRRHPPTYFSLTHSAIEATKLAGYDIPMEANVEVYLAGISNDPKLWKNPEKFEPERFMSGEEEVDMTGIKGMKMIPFGVGRRICPGLGMATIHVHLMLARLVQEFEWSSYPPNSKLDFTKKYEFTVVMKNSLRAIATDRA 512
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 21412664 21414202 + CcPI632755_08g009530.1 Cco08g0953 185427
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cco08g0953 512 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 24 509 IPR051103 GO:0016020(PANTHER)|GO:0016709(PANTHER)
Cco08g0953 512 SUPERFAMILY Cytochrome P450 43 511 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco08g0953 512 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco08g0953 512 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco08g0953 512 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco08g0953 512 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco08g0953 512 Pfam Cytochrome P450 43 500 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco08g0953 512 FunFam Cytochrome P450 family protein 36 512 - -
Cco08g0953 512 CDD CYP77_89 75 505 - -
Cco08g0953 512 Gene3D Cytochrome P450 28 510 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco08g0953 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cco08g0953 512 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco08g0953 512 PRINTS E-class P450 group I signature 407 431 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco08g0953 512 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco08g0953 512 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco08g0953 512 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco08g0953 512 PRINTS E-class P450 group I signature 97 118 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco08g0953 512 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco08g0953 512 PRINTS E-class P450 group I signature 193 211 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cco08g0953 512 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco08g0953 Cco-Chr8:21412664 Cco09g1900 Cco-Chr9:32449273 7.90E-98 dispersed
Cco01g0074 Cco-Chr1:550378 Cco08g0953 Cco-Chr8:21412664 6.10E-90 transposed
Cco04g1993 Cco-Chr4:34103347 Cco08g0953 Cco-Chr8:21412664 2.10E-127 transposed
Cco05g2424 Cco-Chr5:32762332 Cco08g0953 Cco-Chr8:21412664 1.10E-205 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco08g0953 K21995 - csv:101206763 920.998