Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco08g1013 ATGCTCTTGAAGCCCTTCAACACCGTCGCCGTCGTATTCATGCTCGCTTTCGCATTCTTCATCATCTTCTTCACTGGCTTCCTCGAATTTCCACCGGCATCCACTTCCATCGTACCGCCCACCGACGATCTGAATCTCTCCGCACCCGAATTTGCTTCCGAACCTTTCACTGATTTGATCACCGCCTTTAAGAAATGGGACTCTCAGGTGGGTTGTGATCGGTTCCGGGAGAAAATTGGCGGCGGTTTGGGGAATGGCTCTTCGTCGGGTTCGCTGCAGCAAGTAGGCGGCGACTCTAATTCGCAATGTGGGGGGCTGAAACTGAATCATGTTGCTGTTTTAGTGAAAGGATGGACTTGGATTCCTGATAATTTAGACAATTTGTATTCGTGTTCTTGTGGATTGAGCTGTCTTTGGACTAAATCTTCTGTTCTTGCCGATAAACCTGACGCCTTGTTCTTCGAAACCAGTACGCCTCCACGGCAGAGGCACAGAGGAGATCCTCTTCGCATATACATGGATCTCGAGGCTGGTCGGAAGCGCTCAGGTTTTGAGGATCTGTTTGTTAGTTATCATGCGGAAGATGATGTTCAGTCCACTTATGCAGGAGCACTATTTCACAACGGCCGAAACTATCACGTATCTTCTTCTAAAAACAATGATACACTCGTTTATTGGTCGTCGTCTCGTTGTCTTCCCCAAAGAAATCAGCTTGCTAGGAAGCTTCTAAGCTTGCTGCCTCACCATTCATTTGGCAAGTGCTTGAACAACGTAGGCGGACTCGATATGGCCCTTTCGATGTACCCTGAATGTGCAAATGATGCCAGTGTCACCCCGAAATGGTGGGATCACTTGCATTGTGCAATGTCTCACTACAAATTTGTTCTCGCAATTGAAAACACAATGACTGAGAGTTATGTAACGGAGAAGCTATTTTACGCACTAGACTCCGGTTCGGTTCCGATCTATTTTGGTGCCCCTAATGTCTGGGACTTTGTTCCTCCACATTCTATAATTGATGGGTCTAAATTCAGCTCCTTGGAAGAGTTAGCTTCTTACGTAAAGCGACTTGCAGATGATCCAGTAGCTTATGCTCAGTACCATGCTTGGAGACGATGCCGTGCATTAGGTAACTATAGAAGGACCCGAGCTGCGAGCCTCGACACGCTGCCATGTCGGGTGTGTGATGCTGTGAGCAGAAGGGGTGGTAGAAATGCTTGA 1221 47.75 MLLKPFNTVAVVFMLAFAFFIIFFTGFLEFPPASTSIVPPTDDLNLSAPEFASEPFTDLITAFKKWDSQVGCDRFREKIGGGLGNGSSSGSLQQVGGDSNSQCGGLKLNHVAVLVKGWTWIPDNLDNLYSCSCGLSCLWTKSSVLADKPDALFFETSTPPRQRHRGDPLRIYMDLEAGRKRSGFEDLFVSYHAEDDVQSTYAGALFHNGRNYHVSSSKNNDTLVYWSSSRCLPQRNQLARKLLSLLPHHSFGKCLNNVGGLDMALSMYPECANDASVTPKWWDHLHCAMSHYKFVLAIENTMTESYVTEKLFYALDSGSVPIYFGAPNVWDFVPPHSIIDGSKFSSLEELASYVKRLADDPVAYAQYHAWRRCRALGNYRRTRAASLDTLPCRVCDAVSRRGGRNA 406
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 21951924 21954812 + CcPI632755_08g010130.1 Cco08g1013 185487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco08g1013 406 Gene3D - 171 379 IPR038577 -
Cco08g1013 406 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 100 400 - -
Cco08g1013 406 FunFam Alpha-(1,4)-fucosyltransferase 170 376 - -
Cco08g1013 406 PIRSF FucT_plant 1 406 IPR017177 -
Cco08g1013 406 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 109 401 IPR001503 GO:0006486(InterPro)|GO:0008417(InterPro)|GO:0016020(InterPro)|GO:0036065(PANTHER)|GO:0046920(PANTHER)
Cco08g1013 406 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 220 401 IPR001503 GO:0006486(InterPro)|GO:0008417(InterPro)|GO:0016020(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco08g1013 K14412 - csv:101216230 768.459