Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco08g1081 ATGGGTGGCGGTGGCGGTAGCAGCGGTGTTGTGCCAAGTAGGGAGTTAGATCAAACTCCGACATGGGCCGTTGCCTCTGTCTGTGCAATCATCATTCTTATTTCCATTATATTGGAAAAGGTTCTTCACATGGTTGGAGAGCTATTCCAAAAAAGGAAAAAGAAAGCATTGTATGAAGCGCTTGAGAAAGTTAAAGGCGAGCTTATGGTTTTAGGATTCATTTCTTTGCTCTTAACATTCGGACAAAATTATATTGCTAAAGTTTGCATACCCTCAAAATATGCAAATACTATGTTGCCTTGCCCTTATAGAGGGACTCTACCTAAAAGCTCCCATGGCCTCGAGCCCCAAGATCACGGCGAAGAGACTACAGATCATCACCGTAGGCTTCTTTGGTACGAGCATCGACGTCGTCTTGGTGGCGGTGCTTCCGTAGAAAGTTGCAAATCAGGGTATACACAACTTATATCTTTAAATGGTTTGCATCAAATACATATCTTCATCTTCTTTCTAGCCGTCCTACATGTTGTATTTAGCGGCATAACCATGACTCTTGGAAGATTGAAAATTCGTGGGTGGAAGGTTTGGGAAAAACAGACTGAACAAGAACATGACGCCATGAACGATCCTACAAGGTTCAGACTTACTCACGAGACTTCCTTTGTTAGAGATCACAGCAGTTTTTGGACCAAAACACCCCTCTCCTTTTACTTTGTATGCTTTTGGAGGCAATTCTTGAGGTCCGTTAGTAGGGCAGATTACTTGTCTCTTAGACATGGTTTTGTCACTGTTCATTTAGCCCCCGGGAGTAAATTTGACTTTCAAAAGTACATCAAAAGATCATTAGAAGATGACTTTAAGGTGGTCGTGGGAATCAGTCCTCTACTATGGGCATCAATGGTGCTTTTTCTACTTCTCAATGTTAGTGCCGTTGGAACGAAGCTGCAAGGAATTATAACACAAATGGCTCTTGAAATCAAGGAAAGGCATGCAGTGGTTCAAGGGATTCCCCTCGTCCAAGTCTCCGATAGACACTTTTGGTTTAGTTGGCCAGTTTTGGTTCTTTATCTCATCCATTATGTCCTCTTCCAGTATGAATTTGGGTTGAGATCATGTTTTCACGACAATTTTGATCTTATTATCATCAGAGTTGCCCTTGGGGTTGGAGTCCAAATTTTGTGCAGCTACATTACACTTCCATTATATGCACTTGTTACTCAGATGGGATCAACAATGAAGAAATCCATATTTGATGAACAAACTTCAAAAGCATTAAAGCAATGGCATAGAAGTGCTTTGAAGAAAAAGAACGAAGGGGGAAAGCCCGATTCAACGCCGATGCGAACTTTAGGCGGCGGCGGCGGCGGGGGAAGCCCCCCCGAGTCACCGACGCAATCCCCGCGTGAATTCCAACATCAATTGGTCTCTCAACCGTTGCCAACCGACGTCGAAGCCTCCACCATTCCTTCAGCCAACATAATGACCACCGTTGATCTCCATCAACATCAGCAAAACTATACCAATCGTGACTTGTTGAGCTGA 1542 43.58 MGGGGGSSGVVPSRELDQTPTWAVASVCAIIILISIILEKVLHMVGELFQKRKKKALYEALEKVKGELMVLGFISLLLTFGQNYIAKVCIPSKYANTMLPCPYRGTLPKSSHGLEPQDHGEETTDHHRRLLWYEHRRRLGGGASVESCKSGYTQLISLNGLHQIHIFIFFLAVLHVVFSGITMTLGRLKIRGWKVWEKQTEQEHDAMNDPTRFRLTHETSFVRDHSSFWTKTPLSFYFVCFWRQFLRSVSRADYLSLRHGFVTVHLAPGSKFDFQKYIKRSLEDDFKVVVGISPLLWASMVLFLLLNVSAVGTKLQGIITQMALEIKERHAVVQGIPLVQVSDRHFWFSWPVLVLYLIHYVLFQYEFGLRSCFHDNFDLIIIRVALGVGVQILCSYITLPLYALVTQMGSTMKKSIFDEQTSKALKQWHRSALKKKNEGGKPDSTPMRTLGGGGGGGSPPESPTQSPREFQHQLVSQPLPTDVEASTIPSANIMTTVDLHQHQQNYTNRDLLS 513
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 22604995 22612196 - CcPI632755_08g010810.1 Cco08g1081 185555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco08g1081 513 PANTHER MLO-LIKE PROTEIN 1 13 476 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Cco08g1081 513 Pfam Mlo family 14 447 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Cco08g1081 513 MobiDBLite consensus disorder prediction 459 487 - -
Cco08g1081 513 MobiDBLite consensus disorder prediction 428 487 - -
Cco08g1081 513 MobiDBLite consensus disorder prediction 428 442 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco04g1876 Cco-Chr4:33377143 Cco08g1081 Cco-Chr8:22604995 5.60E-161 dispersed
Cco08g1081 Cco-Chr8:22604995 Cco10g0012 Cco-Chr10:197771 2.70E-146 dispersed
Cco08g1081 Cco-Chr8:22604995 Cco09g2082 Cco-Chr9:35230327 3.20E-75 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco08g1081 K08472 - csv:101208890 875.93