Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco08g1160 | ATGGAGGAAGAGGAAACCGGAGAGGCTATCCGGCCGGAATTTCCGACGGGGCGAGTGAAGAAGATAATGAAGCTCGACAAGGATATTGGCAAAGTGAATTCAGAAGCCCTGTTTCTAGTCTCATGCGCCACCGAGCTCTTCCTCAAGCTTCTCGCTGAAAAATCTGCAGAAGTCGCCGCTGAGAAGAAACGGAAAACCGTGAAGCTTGAACACATCCGAATCGCCGCCAAAAGGCATCGATCTATTAGTGATTTTCTACTCGATTCGCTTCCTCTTCCTTCTCAGCGGTCGGATGCGCCGGCAAAGGACGAGAATCGCACTCGCACTGTCGTTGATAAAGTGGCTCCTGAAGGAACCCGTCGAATCGATGATTTCTTTCGCCGGCCAGCAAAGACAACGTCGGCGGAGACCAACGAGTCATAG | 423 | 51.77 | MEEEETGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRIAAKRHRSISDFLLDSLPLPSQRSDAPAKDENRTRTVVDKVAPEGTRRIDDFFRRPAKTTSAETNES | 140 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 23408389 | 23408811 | + | CcPI632755_08g011600.1 | Cco08g1160 | 185634 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco08g1160 | 140 | MobiDBLite | consensus disorder prediction | 90 | 114 | - | - | |
Cco08g1160 | 140 | SUPERFAMILY | Histone-fold | 12 | 91 | IPR009072 | GO:0046982(InterPro) | |
Cco08g1160 | 140 | MobiDBLite | consensus disorder prediction | 99 | 114 | - | - | |
Cco08g1160 | 140 | Pfam | Histone-like transcription factor (CBF/NF-Y) and archaeal histone | 13 | 75 | IPR003958 | - | |
Cco08g1160 | 140 | MobiDBLite | consensus disorder prediction | 121 | 140 | - | - | |
Cco08g1160 | 140 | PANTHER | HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED | 9 | 106 | IPR050568 | GO:0000976(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER) | |
Cco08g1160 | 140 | Gene3D | Histone, subunit A | 1 | 91 | IPR009072 | GO:0046982(InterPro) |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
59790 | PF00808 | CBFD_NFYB_HMF | 1.40E-19 | CL0012 | Cco | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco08g1160 | - | - | - | 0.0 |