Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco08g1201 | ATGCCGAGCATTTCGGCCCTCTATTCCATTCAAGAAGTCTCACAGCACAGTTCCAACGACGACTGTTGGATCATTATCGATGGCAAGGTATATGATTTGACTTCATATTTGGATGAGCATCCCGGTGGAGATGATGTTATTGTGGCTGCAACTGGCAGAGATGCCACAGATGATTTTGAAGATGCTGGTCATAGCAAAGACGCCAGAGAGTTGATGGAGAAGTTCTATATCGGCGTGCTTGATACATCTCCCTCGGATAGCCTAGAACTTGAAACGAAACAAGTAGACGGTTATGCAGCTCGGTTTCAGGCCTTGACAAAGCAATACTGGAAGGCTCCTGTTGCAGTACTTGGTATTTCTGTGGTAGTTGGCTGTCTATACTTGCGCAAGAAGTGA | 396 | 45.96 | MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDTSPSDSLELETKQVDGYAARFQALTKQYWKAPVAVLGISVVVGCLYLRKK | 131 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 23729642 | 23731467 | + | CcPI632755_08g012010.1 | Cco08g1201 | 185675 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco08g1201 | 131 | SMART | Cyt_b5_2 | 8 | 81 | IPR001199 | - | |
Cco08g1201 | 131 | PRINTS | Cytochrome B5 signature | 40 | 54 | IPR001199 | - | |
Cco08g1201 | 131 | PRINTS | Cytochrome B5 signature | 68 | 80 | IPR001199 | - | |
Cco08g1201 | 131 | PRINTS | Cytochrome B5 signature | 30 | 40 | IPR001199 | - | |
Cco08g1201 | 131 | PRINTS | Cytochrome B5 signature | 55 | 62 | IPR001199 | - | |
Cco08g1201 | 131 | FunFam | Cytochrome b5 type B | 3 | 85 | - | - | |
Cco08g1201 | 131 | ProSitePatterns | Cytochrome b5 family, heme-binding domain signature. | 36 | 43 | IPR018506 | GO:0020037(InterPro) | |
Cco08g1201 | 131 | PANTHER | CYTOCHROME B5 | 6 | 129 | IPR050668 | GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER) | |
Cco08g1201 | 131 | Gene3D | - | 5 | 93 | IPR036400 | - | |
Cco08g1201 | 131 | Pfam | Cytochrome b5-like Heme/Steroid binding domain | 11 | 81 | IPR001199 | - | |
Cco08g1201 | 131 | ProSiteProfiles | Cytochrome b5 family, heme-binding domain profile. | 5 | 81 | IPR001199 | - | |
Cco08g1201 | 131 | SUPERFAMILY | Cytochrome b5-like heme/steroid binding domain | 5 | 84 | IPR036400 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco06g0811 | Cco-Chr6:9552183 | Cco08g1201 | Cco-Chr8:23729642 | 2.30E-25 | dispersed | |
Cco07g0190 | Cco-Chr7:2006895 | Cco08g1201 | Cco-Chr8:23729642 | 3.70E-23 | dispersed | |
Cco08g1201 | Cco-Chr8:23729642 | Cco11g0236 | Cco-Chr11:2268786 | 6.20E-15 | dispersed | |
Cco08g1201 | Cco-Chr8:23729642 | Cco05g0387 | Cco-Chr5:3164184 | 4.20E-27 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco08g1201 | K23490 | - | csv:101220127 | 243.047 |