Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco08g1263 ATGGAGAAGGAGAGAGAGCACCTTGTTTACTTGGCTAGACTTGCAGAACAAGCTGAGAGATATGATGAAATGGTGGAAATGATGAAGAGCGTTGCAAAGTTGGATGTAGAACTTACTGTGGAGGAGAGGAACCTGGTCTCTGTGGGATATAAGAATGTTATTGGGGCAAGAAGAGCCTCATGGCGTATTTTATCTTCTATTGAACAAAAGGAGGAAGGAAAGAAGAACGAGGTTAATGTGAAGAGGGTAAAGGAGTACAGGCAGAGGGTTGAAGACGAACTGGCGAGAATTTGCCAGGACATCTTAACTGTTGTTGACCAGCATCTCATTCCATCTTCATCCTCTGGAGAATCCAATGTTTTTTACTATAAGATGAAGGGGGATTATAACCGATACTTAGCGGAGTTTAAATCTGGCCGTGAACGTGAAGAAGCTGCAGACCAGTCGATGAAGGCCTATGAGTCTGCCTCAAGCATTGCAAGCTCTGATCTGCCTCCAACACACCCCATCAGACTTGGCTTGGCGCTTAACTTTTCTGTTTTCTACTATGAGATATTAAATTCCCCAGAGAGGGCGTGCCACCTTGCTAAACAAGCTTTTGATGATGCCATAGCTGAACTCGACGGCCTCAATGAAGAATCCTACAAGGACAGTACCCTCATTATGCAGCTGCTGAGGGATAATCTAACGTTATGGACCTCAGATCTCCCAGATGAGGGAGGTGAGCAATCTAAAGCTGCTGATGAACCTTGA 753 45.02 MEKEREHLVYLARLAEQAERYDEMVEMMKSVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEGKKNEVNVKRVKEYRQRVEDELARICQDILTVVDQHLIPSSSSGESNVFYYKMKGDYNRYLAEFKSGREREEAADQSMKAYESASSIASSDLPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDDAIAELDGLNEESYKDSTLIMQLLRDNLTLWTSDLPDEGGEQSKAADEP 250
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 24433952 24436458 - CcPI632755_08g012630.1 Cco08g1263 185737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco08g1263 250 SUPERFAMILY 14-3-3 protein 4 235 IPR036815 -
Cco08g1263 250 PIRSF 14-3-3 1 247 IPR000308 -
Cco08g1263 250 ProSitePatterns 14-3-3 proteins signature 1. 43 53 IPR023409 -
Cco08g1263 250 Pfam 14-3-3 protein 11 233 IPR023410 -
Cco08g1263 250 PANTHER 14-3-3 PROTEIN 4 238 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Cco08g1263 250 PRINTS 14-3-3 protein zeta signature 86 110 IPR000308 -
Cco08g1263 250 PRINTS 14-3-3 protein zeta signature 179 205 IPR000308 -
Cco08g1263 250 PRINTS 14-3-3 protein zeta signature 206 235 IPR000308 -
Cco08g1263 250 PRINTS 14-3-3 protein zeta signature 37 66 IPR000308 -
Cco08g1263 250 PRINTS 14-3-3 protein zeta signature 117 139 IPR000308 -
Cco08g1263 250 PRINTS 14-3-3 protein zeta signature 152 178 IPR000308 -
Cco08g1263 250 FunFam 14-3-3 protein epsilon 1 246 - -
Cco08g1263 250 ProSitePatterns 14-3-3 proteins signature 2. 215 234 IPR023409 -
Cco08g1263 250 Gene3D - 1 246 IPR036815 -
Cco08g1263 250 SMART 1433_4 5 246 IPR023410 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco08g1263 Cco-Chr8:24433952 Cco08g1276 Cco-Chr8:24564769 4.60E-91 dispersed
Cco05g2645 Cco-Chr5:34563465 Cco08g1263 Cco-Chr8:24433952 4.30E-108 transposed
Cco07g0275 Cco-Chr7:2825791 Cco08g1263 Cco-Chr8:24433952 4.20E-111 transposed
Cco08g1195 Cco-Chr8:23681446 Cco08g1263 Cco-Chr8:24433952 6.90E-106 transposed
Cco11g1462 Cco-Chr11:27431338 Cco08g1263 Cco-Chr8:24433952 2.30E-110 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco08g1263 K06630 - csv:101222677 463.381