Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cco08g1276 | ATGGCTGCCGCCCCTTCTGTTCGCGAGGAGAATGTTTACATGGCCAAGCTTGCCGAGCAGGCCGAGCGCTACGAGGAGATGGTCGAGTTCATGGAGAAGGTTTCCGCTTCCCTCGACAAGGAGGAGCTCACCGTCGAGGAGAGAAACCTCCTTTCTGTCGCCTACAAGAACGTCATCGGCGCTCGCAGGGCTTCCTGGCGTATCATTTCCTCCATCGAACAAAAGGAGGAGAGCCGAGGCAACGACGACCATGTCTCTGTGATCCGTGACTATAGATCCAAAATTGAGACCGAACTCTCCAATATTTGCGATGGAATCCTCAAGCTTCTCGATTCCAGACTCATTCCCTCCGCCGCTTCCGGAGATTCCAAGGTTTTTTACCTCAAAATGAAGGGAGATTACCATAGATACCTCGCCGAATTCAAAACCGGAGCCGAACGCAAGGAAGCTGCTGAAAGCACTCTCACTGCTTACAAAGCCGCTCAGGATATTGCAAATGCTGAGTTGCCTCCTACACATCCGATCCGACTTGGATTGGCCCTTAACTTCTCTGTATTCTACTATGAAATTTTGAATTCACCTGATCGTGCCTGCAGTCTTGCAAAACAGGCGTTTGATGAAGCTATCGCTGAATTGGATACCCTTGGCGAGGAATCCTACAAAGATAGTACTTTGATCATGCAGCTTCTTCGCGATAATCTCACTCTCTGGACATCGGACATGCAGGATGATGGTGCTGATGAGATTAAAGAAGCTCCCCCGAAGCGTGAGGATGAAAAGCAGTGA | 786 | 50.0 | MAAAPSVREENVYMAKLAEQAERYEEMVEFMEKVSASLDKEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDDHVSVIRDYRSKIETELSNICDGILKLLDSRLIPSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELPPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAPPKREDEKQ | 261 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 24564769 | 24566394 | + | CcPI632755_08g012760.1 | Cco08g1276 | 185750 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cco08g1276 | 261 | FunFam | 14-3-3 protein epsilon | 4 | 251 | - | - | |
Cco08g1276 | 261 | Gene3D | - | 2 | 251 | IPR036815 | - | |
Cco08g1276 | 261 | MobiDBLite | consensus disorder prediction | 243 | 261 | - | - | |
Cco08g1276 | 261 | SUPERFAMILY | 14-3-3 protein | 8 | 240 | IPR036815 | - | |
Cco08g1276 | 261 | Coils | Coil | 14 | 41 | - | - | |
Cco08g1276 | 261 | SMART | 1433_4 | 8 | 251 | IPR023410 | - | |
Cco08g1276 | 261 | PANTHER | 14-3-3 PROTEIN | 8 | 243 | IPR000308 | GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER) | |
Cco08g1276 | 261 | MobiDBLite | consensus disorder prediction | 242 | 261 | - | - | |
Cco08g1276 | 261 | PIRSF | 14-3-3 | 2 | 250 | IPR000308 | - | |
Cco08g1276 | 261 | ProSitePatterns | 14-3-3 proteins signature 1. | 48 | 58 | IPR023409 | - | |
Cco08g1276 | 261 | Pfam | 14-3-3 protein | 14 | 238 | IPR023410 | - | |
Cco08g1276 | 261 | ProSitePatterns | 14-3-3 proteins signature 2. | 220 | 239 | IPR023409 | - | |
Cco08g1276 | 261 | PRINTS | 14-3-3 protein zeta signature | 211 | 240 | IPR000308 | - | |
Cco08g1276 | 261 | PRINTS | 14-3-3 protein zeta signature | 42 | 71 | IPR000308 | - | |
Cco08g1276 | 261 | PRINTS | 14-3-3 protein zeta signature | 122 | 144 | IPR000308 | - | |
Cco08g1276 | 261 | PRINTS | 14-3-3 protein zeta signature | 157 | 183 | IPR000308 | - | |
Cco08g1276 | 261 | PRINTS | 14-3-3 protein zeta signature | 184 | 210 | IPR000308 | - | |
Cco08g1276 | 261 | PRINTS | 14-3-3 protein zeta signature | 91 | 115 | IPR000308 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cco08g1263 | Cco-Chr8:24433952 | Cco08g1276 | Cco-Chr8:24564769 | 4.60E-91 | dispersed | |
Cco08g1276 | Cco-Chr8:24564769 | Cco11g1495 | Cco-Chr11:27783990 | 1.00E-101 | dispersed | |
Cco07g1702 | Cco-Chr7:31024817 | Cco08g1276 | Cco-Chr8:24564769 | 4.00E-120 | transposed | |
Cco11g1473 | Cco-Chr11:27549261 | Cco08g1276 | Cco-Chr8:24564769 | 4.00E-130 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cco08g1276 | K06630 | - | csv:101220164 | 508.834 |