Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco08g1324 ATGGCGAGGGAGAAAATCAAGATAAAGAAGATTGATAACCTAACGGCGAGACAGGTGACATTCTCTAAGCGAAGGAGAGGGCTTATCAAGAAGGCGGAGGAGCTATCGGTGCTCTGCGACGCCGAAGTAGCCCTGCTCATCTTCTCCGCCACCGGAAAGTTCTTCGAATATTCCAACTCCAGTGTTAAGGATGTTATAGCTAGATATAACTTGCACTCTAGTAACCTTGGAAAGTTGGAATATCCATCCCTTGAGCTGCAGCTTGAAAATGAAAATAGCAATCACGTCCGATTGAACAAGGAAGTTGCAGATATGAGCCAACAACTTAGGCAGATGAGGGGAGAAGATCTTCAAGGATTGAACTTAGAAGATCTGAAGCAATTGGAAAGATTGCTTGAAGTTGGTCTCACACGAGTTCTTCAAACCAAGGAAAAGAAGATTATGAGTGAAATTAGTGCGCTTGAGCTTAAGGGAGCGAGGCTGATGGAAGAAAACAAGATGCTTAGACAGCAGATGTTAAGGTTGTCGAATGAAAGAACGCCAGTGCTCGTGGATTCCGACGTGCATGTGGCGGCGGAAGAAGGGGTTTCGTCGGAATCCGCCGCCAATGTCTGCAGCTGCAACAGCGGCCCTCCTGCCGACGACGACAGCTCCGACACTTCCCTCAAATTAGGCCATGCAACAAGCAAAGGCGTGAGGGAGCATCCAGCTGCGCATTGGTTCCATTTTGAGCAACCCAAGTGGGCCAAAAGCTTTGACACAAATCTGTGTTTGGTAAAACTCTGGCTTCCCCTCCCTGTTCATCGGAGCTTGGGCTGCGCTCTGATTTACGAATGTCAACACACTGAGTTCCTTTTGACTCGTTTTCAACTCACCGATCTTCCCTTCATCCCTCTCTTCGCCATGAAGAACGCCCCCGTCAAAGGCCTTGAAGTTTTCGATTTCACCGAAGAAGACGAACTTCCTGAATTGATCTCCGAGAAGCGCCTCAGCAAATTTAAAAACCCTAATCTCGAATCTAACGCTGTTTTGAAGTATGAATTTCTCGAATGTGGGAAGGAGATTGAAAATCCACACATGGATGTTGATTTGGATGAATGTAATCGTGGTTGTGACAATGGTATTTCACATAATCCTTCGGGCACAATTAAAGAGCAACAAATCATGGAAGAAGAGAAATATCAATTGGATGCCAATGCAAAATCAGAAGTGAAATGCCATTTGCAAGATATGCTCGTGCAAGTAGATAATCATGTGACACAAAGCCTTTGCTCTCAACTTGGGAAAATTGGATCTAGCTCTCAAAGTCCTACCCAGGGGTTAACTTGCACTCTTCCTGAGTTTACTGCTGAAAGGGAGCAAGTTGATGCACTTTCAGATCCTAATGGAAGCATAAAAGAGAGTTCTCCAGTGAGCCCTCCTTCAGAAACTGTAGAGGATGGTGTTTTGTTGAACGGGAAGTCTTCAGATAATTGCTCATCTGACAATGAAAAGGATGATCTTAGCGACGAGGTTGTCCTTTATCCCGATTATATTGTATGTGGAGACTTTTACTGTGCCAGTCCCTCGTTAACCTTTTCACATAATGGCATCAAAATTAATGGTTTTGCTGATTATGGAAGCAATGAGTACCTTAACCTTGAATGGAGAGTCGACGATGTCATTCATATTGAGTGCCAGTGCTTTCAAAGGGTTGAATATGTGATGATCAAGCTCCATGTTATCTCAAAGGATGCTGGTGAATTTGACAATGCGTGTGACAGTTCTGGCATTAAGGAAGTGAAGGTTGTTCTTGTTGATTCTTACTGGTCTGAGAAACAACAAAAAATCAGATCTTTGGATTCCAGATACATGGCTATTTGGAATATGTCTCTCGATGTGGGAATAGGATCCGATGATGATGATTTAGGTGGGCAGAGACACTATTTTCCCAACTTTGATGAGCCTTTTGAAGAAGTTGTCTATCCCAAAGGAGATCCAGATGCTGTTTCCATTAGTAAGAGGGATGTTGACTTGCTGCAACCAGAGACGTTTGTCAATGACACAATCATTGACTTTTACATCCAGTATTTGAAGAGCCAGATAGATCCCAAGGAGAAGCATAGATTTCACTTCTTCAATAGTTTTTTCTTTAGGAAGCTGGCAGACCTTGATAAAGATCCATCAAGTGCTTCAGATGGCAGAGCTGCCTTTCTACGTGTTCGGAAATGGACACGGAAAGTGGATTTATTTGACAAGGATTATATCTTCATTCCTATAAACTTCAATCTTCATTGGAGCTTAATGGTCATATGCCATCCTGGCGAAGTGGCTAGATATAGTGATGAAGACCTGACGAAGTCAATGAAAGTACCGTGTATATTGCATATGGATTCTATTAAAGGAAGTCATGCAGGTCTTAAGAATCTCATTCAAAGTTATTTGCTGGAAGAATGGAAAGAGAGAAACAAGGAGACACCTGAAGATATTTCAACAAAATTTAAGAACCTTCGGTTCCTCCCACTTGAGCTTCCGCAGCAGGAAAATTCATTTGATTGCGGATTGTTCTTGCTCCACTATCTAGAACTTTTTCTGGCAGAAGCTCCTCTTGATTTTAGCCCGTTCAAAATCTCCAAGCTTTCAAAATTTCTTAATGTGGATTGGTTCCCACCTGCTGAGGCCTACCTCAAGCGAACTTTAATACAGAGATTAATTTTTGAAATCCTTGAGAACCGATCTCGAGAAATGTCCGCAGCTGCTTGCAGTGATGAACTCTTGTCTAAATTTCCATCCAATAATGAGGATGAAACTGGTCTGGAGCTTCTTCCCGAAAGAGGAAGCCCAGCCGTGGCACGCAATCACAATTTGCCAACCTCACAAGCTGTTGATGGGATTGAAATTACTCTATTATCTGAATCTTCCAGTAGACACAACCACTTCATTGACGGTTCTGGCTTGGTCGTCAGAGAATTATTTGAACCAGGCGCCTCTAATGGACCGTTACTTGGACACTATCAATCTTTTGGTCAAACATCATCGTATTTTGATTCAAATGGTACTGTGCTGGAGGAGGACGCAGATGCAGAAACTGGAGACCGTTTCATGTACTTACCTCCACAACAGGATGGTTTGCAGCCAATTGATGCAATGACATCTCAAGCTTGTCGTTTTCCGTGTTCATCGAGAGGCCTTGAATCGGACCCTGCTTTTGACTTATGCATGTCTATTCAACAAGAGCCCGGTGGGGGCATTGCCTCGTCCCCGACAGATGACTTGGAAGACGTGGGAATCATTGAACATTCCAATGTTAGGGAAGCAAGTCCTGGTAACACAGAAGAAAGGAACGGAAAAGGGCCTCTACCGATCGAGAAGGAGAACCTGGAACCTGTAGCAGAATGCCCTACTTCTGCTGCTACCACGAAGAACGATTTTGATGCCATTGGCTTCTCTCAAGATGACACTAACGAGGAAAATAATGGTTCTGATAATCCCATGTGTAAAGAGACTCTCGTTGCATTGCCGCATCTAGATAAAGATATAACAACCAAAACAGACGTCGAACATGATGATGTTCTGGTGGTTGCTTCGGTTACTGAGGTGGACTTAGACGAGCAACCCCCTGCCAAGAAACCAAGGCGTTTGTTATACCACGAAGAAGCGAGTAACAACGGTGTCAGAGAAGGTTTGTTGGATGATGCAGAGTTATAA 3687 43.67 MAREKIKIKKIDNLTARQVTFSKRRRGLIKKAEELSVLCDAEVALLIFSATGKFFEYSNSSVKDVIARYNLHSSNLGKLEYPSLELQLENENSNHVRLNKEVADMSQQLRQMRGEDLQGLNLEDLKQLERLLEVGLTRVLQTKEKKIMSEISALELKGARLMEENKMLRQQMLRLSNERTPVLVDSDVHVAAEEGVSSESAANVCSCNSGPPADDDSSDTSLKLGHATSKGVREHPAAHWFHFEQPKWAKSFDTNLCLVKLWLPLPVHRSLGCALIYECQHTEFLLTRFQLTDLPFIPLFAMKNAPVKGLEVFDFTEEDELPELISEKRLSKFKNPNLESNAVLKYEFLECGKEIENPHMDVDLDECNRGCDNGISHNPSGTIKEQQIMEEEKYQLDANAKSEVKCHLQDMLVQVDNHVTQSLCSQLGKIGSSSQSPTQGLTCTLPEFTAEREQVDALSDPNGSIKESSPVSPPSETVEDGVLLNGKSSDNCSSDNEKDDLSDEVVLYPDYIVCGDFYCASPSLTFSHNGIKINGFADYGSNEYLNLEWRVDDVIHIECQCFQRVEYVMIKLHVISKDAGEFDNACDSSGIKEVKVVLVDSYWSEKQQKIRSLDSRYMAIWNMSLDVGIGSDDDDLGGQRHYFPNFDEPFEEVVYPKGDPDAVSISKRDVDLLQPETFVNDTIIDFYIQYLKSQIDPKEKHRFHFFNSFFFRKLADLDKDPSSASDGRAAFLRVRKWTRKVDLFDKDYIFIPINFNLHWSLMVICHPGEVARYSDEDLTKSMKVPCILHMDSIKGSHAGLKNLIQSYLLEEWKERNKETPEDISTKFKNLRFLPLELPQQENSFDCGLFLLHYLELFLAEAPLDFSPFKISKLSKFLNVDWFPPAEAYLKRTLIQRLIFEILENRSREMSAAACSDELLSKFPSNNEDETGLELLPERGSPAVARNHNLPTSQAVDGIEITLLSESSSRHNHFIDGSGLVVRELFEPGASNGPLLGHYQSFGQTSSYFDSNGTVLEEDADAETGDRFMYLPPQQDGLQPIDAMTSQACRFPCSSRGLESDPAFDLCMSIQQEPGGGIASSPTDDLEDVGIIEHSNVREASPGNTEERNGKGPLPIEKENLEPVAECPTSAATTKNDFDAIGFSQDDTNEENNGSDNPMCKETLVALPHLDKDITTKTDVEHDDVLVVASVTEVDLDEQPPAKKPRRLLYHEEASNNGVREGLLDDAEL 1228
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 25095851 25114849 - CcPI632755_08g013240.1 Cco08g1324 185798

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cco08g1324 1228 MobiDBLite consensus disorder prediction 201 228 - -
Cco08g1324 1228 Gene3D - 655 899 - -
Cco08g1324 1228 MobiDBLite consensus disorder prediction 461 475 - -
Cco08g1324 1228 Pfam Ulp1 protease family, C-terminal catalytic domain 678 879 IPR003653 GO:0006508(InterPro)|GO:0008234(InterPro)
Cco08g1324 1228 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677(InterPro)|GO:0046983(InterPro)
Cco08g1324 1228 SMART madsneu2 1 60 IPR002100 GO:0003677(InterPro)|GO:0046983(InterPro)
Cco08g1324 1228 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677(InterPro)|GO:0046983(InterPro)
Cco08g1324 1228 MobiDBLite consensus disorder prediction 1196 1213 - -
Cco08g1324 1228 ProSiteProfiles K-box domain profile. 88 178 IPR002487 GO:0003700(InterPro)|GO:0005634(InterPro)|GO:0006355(InterPro)
Cco08g1324 1228 MobiDBLite consensus disorder prediction 201 216 - -
Cco08g1324 1228 MobiDBLite consensus disorder prediction 1196 1228 - -
Cco08g1324 1228 FunFam Probable ubiquitin-like-specific protease 2B 703 834 - -
Cco08g1324 1228 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677(InterPro)|GO:0046983(InterPro)
Cco08g1324 1228 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677(InterPro)|GO:0046983(InterPro)
Cco08g1324 1228 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677(InterPro)|GO:0046983(InterPro)
Cco08g1324 1228 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677(InterPro)|GO:0046983(InterPro)
Cco08g1324 1228 ProSiteProfiles Ubiquitin-like protease family profile. 663 857 IPR003653 GO:0006508(InterPro)|GO:0008234(InterPro)
Cco08g1324 1228 MobiDBLite consensus disorder prediction 459 499 - -
Cco08g1324 1228 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 2B-RELATED 302 1158 - -
Cco08g1324 1228 CDD MADS_MEF2_like 2 75 IPR033896 GO:0000977(InterPro)|GO:0045944(InterPro)
Cco08g1324 1228 Coils Coil 81 115 - -
Cco08g1324 1228 Pfam K-box region 88 172 IPR002487 GO:0003700(InterPro)|GO:0005634(InterPro)|GO:0006355(InterPro)
Cco08g1324 1228 Gene3D - 13 80 IPR036879 GO:0003677(InterPro)|GO:0046983(InterPro)
Cco08g1324 1228 Gene3D - 703 834 - -
Cco08g1324 1228 FunFam Transcription factor, MADS-box 13 83 - -
Cco08g1324 1228 SUPERFAMILY SRF-like 3 74 IPR036879 GO:0003677(InterPro)|GO:0046983(InterPro)
Cco08g1324 1228 Coils Coil 151 178 - -
Cco08g1324 1228 SUPERFAMILY Cysteine proteinases 655 900 IPR038765 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco08g1324 K08596 - - csv:101206097 1546.95
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco08g1324 Cco-Chr8:25095851 Cco10g0939 Cco-Chr10:20524499 2.60E-46 dispersed
Cco11g1527 Cco-Chr11:28128783 Cco08g1324 Cco-Chr8:25095851 3.00E-06 dispersed
Cco04g1210 Cco-Chr4:27514000 Cco08g1324 Cco-Chr8:25095851 1.20E-14 transposed
Cco05g2798 Cco-Chr5:35726583 Cco08g1324 Cco-Chr8:25095851 6.10E-35 transposed
Cco06g0517 Cco-Chr6:5641371 Cco08g1324 Cco-Chr8:25095851 7.20E-19 transposed
Cco09g1796 Cco-Chr9:30791900 Cco08g1324 Cco-Chr8:25095851 2.60E-127 transposed
Cco11g1526 Cco-Chr11:28118774 Cco08g1324 Cco-Chr8:25095851 2.70E-16 wgd
Cco04g1582 Cco-Chr4:31196782 Cco08g1324 Cco-Chr8:25095851 4.70E-29 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cco03g0720 . 12 234 MADS-box Gene Family AT3G58780 65.5 2.1e-75 279.3
Cco04g2193 . 44 266 MADS-box Gene Family AT3G58780 63.1 4.4e-73 271.6
Cco08g0096 . 1 222 MADS-box Gene Family AT3G58780 60.9 4.9e-72 268.1
Cco02g1961 . 60 267 MADS-box Gene Family AT3G58780 63.2 9.8e-65 243.8
Cco01g1749 . 1 245 MADS-box Gene Family AT1G26310 56.1 1.9e-68 256.1
Cco08g1207 . 1 178 MADS-box Gene Family AT1G26310 71.3 8.9e-66 247.3
Cco07g1681 . 1 235 MADS-box Gene Family AT1G26310 55.5 7.0e-63 237.7
Cco08g1206 . 1 180 MADS-box Gene Family AT1G26310 54.6 1.1e-44 177.2
Cco07g1680 . 1 173 MADS-box Gene Family AT1G26310 54.5 4.0e-42 168.7
Cco06g0023 . 1 158 MADS-box Gene Family AT1G26310 59.2 5.3e-42 168.3
Cco01g1750 . 1 174 MADS-box Gene Family AT1G26310 54.2 7.6e-41 164.5
Cco08g0096 . 1 223 MADS-box Gene Family AT4G09960 75.2 8.9e-89 323.6
Cco03g0720 . 20 197 MADS-box Gene Family AT4G09960 74.7 9.5e-67 250.4
Cco04g2193 . 46 221 MADS-box Gene Family AT4G09960 74.4 9.5e-67 250.4
Cco02g1961 . 60 216 MADS-box Gene Family AT4G09960 66.2 4.3e-51 198.4
Cco08g0104 . 1 201 MADS-box Gene Family AT1G71692 57.6 2.5e-58 222.2
Cco06g0023 . 1 241 MADS-box Gene Family AT3G61120 56.1 6.7e-63 237.7
Cco07g1680 . 1 173 MADS-box Gene Family AT3G61120 53.8 1.1e-41 167.2
Cco06g0210 . 1 170 MADS-box Gene Family AT3G61120 55.8 1.9e-41 166.4
Cco01g1749 . 1 168 MADS-box Gene Family AT3G61120 51.5 3.7e-37 152.1
Cco08g1206 . 1 173 MADS-box Gene Family AT3G61120 50.9 3.7e-37 152.1
Cco01g0335 . 1 208 MADS-box Gene Family AT4G11880 59.2 3.8e-57 218.4
Cco05g0237 . 9 222 MADS-box Gene Family AT4G11880 53.4 1.3e-49 193.4
Cco06g0024 . 1 218 MADS-box Gene Family AT4G11880 53.4 1.1e-48 190.3
Cco05g0928 . 1 189 MADS-box Gene Family AT4G11880 56.5 2.7e-42 169.1
Cco01g0562 . 1 210 MADS-box Gene Family AT4G11880 51.8 7.8e-42 167.5
Cco10g1206 . 1 249 MADS-box Gene Family AT5G13790 54.4 1.0e-56 217.2
Cco10g0961 . 29 255 MADS-box Gene Family AT2G22630 52.0 2.2e-55 212.6
Cco04g1582 . 1 160 MADS-box Gene Family AT2G22630 67.5 1.2e-53 206.8
Cco01g0335 . 1 210 MADS-box Gene Family AT4G22950 60.6 2.8e-60 228.8
Cco05g0237 . 9 224 MADS-box Gene Family AT4G22950 53.3 3.7e-52 201.8
Cco06g0024 . 1 218 MADS-box Gene Family AT4G22950 54.3 3.7e-52 201.8
Cco05g0928 . 1 189 MADS-box Gene Family AT4G22950 55.8 1.1e-43 173.7
Cco01g0562 . 1 210 MADS-box Gene Family AT4G22950 51.6 2.6e-42 169.1
Cco08g0096 . 1 164 MADS-box Gene Family AT4G22950 51.8 2.6e-37 152.5
Cco07g1680 . 1 246 MADS-box Gene Family AT5G15800 73.4 8.2e-99 357.1
Cco06g0210 . 1 241 MADS-box Gene Family AT5G15800 59.8 1.2e-73 273.5
Cco01g1750 . 1 253 MADS-box Gene Family AT5G15800 53.8 5.0e-64 241.5
Cco08g1206 . 1 173 MADS-box Gene Family AT5G15800 69.5 1.8e-58 223.0
Cco01g1749 . 1 174 MADS-box Gene Family AT5G15800 53.4 2.4e-42 169.5
Cco07g1681 . 1 175 MADS-box Gene Family AT5G15800 54.3 9.2e-42 167.5
Cco08g1207 . 1 176 MADS-box Gene Family AT5G15800 54.5 1.2e-41 167.2
Cco05g0921 . 1 171 MADS-box Gene Family AT5G15800 54.0 6.6e-40 161.4
Cco06g0024 . 1 162 MADS-box Gene Family AT2G45660 71.0 8.3e-54 206.8
Cco05g0237 . 9 168 MADS-box Gene Family AT2G45660 68.1 1.7e-51 199.1
Cco01g0335 . 1 158 MADS-box Gene Family AT2G45660 65.8 9.5e-50 193.4
Cco01g0562 . 1 158 MADS-box Gene Family AT2G45660 65.8 2.4e-45 178.7
Cco05g0928 . 1 157 MADS-box Gene Family AT2G45660 60.5 5.0e-43 171.0
Cco10g0961 . 29 256 MADS-box Gene Family AT4G37940 51.8 2.7e-55 212.2
Cco04g1582 . 1 155 MADS-box Gene Family AT4G37940 67.1 2.1e-52 202.6
Cco04g1600 . 116 338 MADS-box Gene Family AT2G22540 63.7 2.1e-69 259.2
Cco08g1324 . 1 225 MADS-box Gene Family AT2G22540 56.5 3.8e-58 221.9
Cco10g0939 . 25 179 MADS-box Gene Family AT2G22540 59.0 3.4e-43 172.2
Cco04g1600 . 116 342 MADS-box Gene Family AT4G24540 57.5 4.8e-60 228.0
Cco08g1324 . 1 225 MADS-box Gene Family AT4G24540 56.8 2.2e-57 219.2
Cco10g0939 . 25 199 MADS-box Gene Family AT4G24540 53.4 6.3e-44 174.5
Cco07g1680 . 1 171 MADS-box Gene Family AT2G03710 66.9 1.1e-57 219.9
Cco08g1206 . 1 171 MADS-box Gene Family AT2G03710 65.1 7.2e-57 217.2
Cco06g0210 . 1 176 MADS-box Gene Family AT2G03710 63.8 2.6e-54 208.8
Cco01g1750 . 1 172 MADS-box Gene Family AT2G03710 63.6 3.7e-53 204.9
Cco06g0023 . 1 169 MADS-box Gene Family AT2G03710 54.7 6.0e-43 171.0
Cco07g1681 . 1 173 MADS-box Gene Family AT2G03710 51.7 4.0e-39 158.3
Cco07g1680 . 1 170 MADS-box Gene Family AT3G02310 86.5 6.7e-77 283.9
Cco06g0210 . 1 172 MADS-box Gene Family AT3G02310 77.9 1.3e-67 253.1
Cco01g1750 . 1 171 MADS-box Gene Family AT3G02310 67.3 6.3e-59 224.2
Cco08g1206 . 1 170 MADS-box Gene Family AT3G02310 66.7 1.9e-55 212.6
Cco06g0023 . 1 168 MADS-box Gene Family AT3G02310 61.4 2.3e-48 189.1
Cco08g1207 . 1 181 MADS-box Gene Family AT3G02310 53.6 7.8e-41 164.1
Cco07g1681 . 1 187 MADS-box Gene Family AT3G02310 51.3 1.0e-40 163.7
Cco05g0921 . 1 187 MADS-box Gene Family AT3G02310 51.0 4.3e-39 158.3
Cco01g0562 . 1 145 MADS-box Gene Family AT5G62165 68.3 3.9e-48 188.0
Cco05g0928 . 1 146 MADS-box Gene Family AT5G62165 64.4 4.7e-46 181.0
Cco06g0024 . 1 154 MADS-box Gene Family AT5G62165 55.2 1.6e-41 166.0
Cco05g0237 . 9 152 MADS-box Gene Family AT5G62165 62.5 2.0e-41 165.6
Cco01g0335 . 1 153 MADS-box Gene Family AT5G62165 55.6 6.0e-41 164.1
Cco10g0961 . 29 263 MADS-box Gene Family AT2G14210 53.8 1.7e-55 213.0
Cco04g1582 . 1 142 MADS-box Gene Family AT2G14210 66.4 9.4e-46 180.6
Cco03g0720 . 15 200 MADS-box Gene Family AT2G42830 72.9 5.8e-70 261.2
Cco08g0096 . 1 179 MADS-box Gene Family AT2G42830 72.9 1.3e-69 260.0
Cco04g2193 . 44 266 MADS-box Gene Family AT2G42830 61.9 1.6e-67 253.1
Cco02g1961 . 60 267 MADS-box Gene Family AT2G42830 62.0 4.6e-59 224.9
Cco06g0023 . 1 245 MADS-box Gene Family AT2G45650 64.7 1.4e-82 303.1
Cco07g1680 . 1 246 MADS-box Gene Family AT2G45650 50.4 2.0e-54 209.5
Cco05g0921 . 1 172 MADS-box Gene Family AT2G45650 58.6 2.2e-48 189.5
Cco08g1206 . 1 195 MADS-box Gene Family AT2G45650 51.2 2.9e-45 179.1
Cco07g1681 . 1 169 MADS-box Gene Family AT2G45650 53.3 4.9e-40 161.8
Cco08g0096 . 1 164 MADS-box Gene Family AT2G45650 53.0 4.9e-40 161.8
Cco08g1207 . 1 177 MADS-box Gene Family AT2G45650 52.0 2.7e-38 156.0
Cco04g2225 . 84 200 MADS-box Gene Family AT1G29960 54.7 1.7e-38 155.6
Cco01g1749 . 63 188 MADS-box Gene Family AT1G69120 67.7 1.7e-40 162.9
Cco08g1207 . 63 179 MADS-box Gene Family AT1G69120 70.1 2.3e-37 152.5
Cco05g0928 . 1 145 MADS-box Gene Family AT5G51870 57.2 4.4e-41 164.9
Cco01g0562 . 1 144 MADS-box Gene Family AT5G51870 56.6 3.5e-38 155.2
Cco01g1749 . 1 239 MADS-box Gene Family AT3G30260 52.0 3.4e-54 208.8
Cco07g1681 . 1 239 MADS-box Gene Family AT3G30260 51.8 3.0e-50 195.7
Cco08g1207 . 1 178 MADS-box Gene Family AT3G30260 58.4 2.0e-46 183.0
Cco01g1749 . 63 241 MADS-box Gene Family AT5G60910 56.1 1.5e-43 172.9
Cco06g0210 . 1 242 MADS-box Gene Family AT1G24260 72.9 7.7e-88 320.5
Cco07g1680 . 1 245 MADS-box Gene Family AT1G24260 59.8 5.5e-70 261.2
Cco01g1750 . 1 252 MADS-box Gene Family AT1G24260 50.6 2.3e-55 212.6
Cco08g1206 . 1 156 MADS-box Gene Family AT1G24260 66.9 4.9e-50 194.9
Cco01g1749 . 1 157 MADS-box Gene Family AT1G24260 54.3 7.8e-40 161.0
Cco08g1207 . 1 159 MADS-box Gene Family AT1G24260 53.8 7.8e-40 161.0
Cco05g0921 . 1 171 MADS-box Gene Family AT1G24260 51.1 2.8e-37 152.5
Cco05g2100 . 1 246 MADS-box Gene Family AT3G54340 56.1 2.1e-66 249.2
Cco11g1650 . 312 450 MADS-box Gene Family AT5G20240 71.9 2.3e-53 205.3
Cco11g1650 . 312 450 MADS-box Gene Family AT5G20240 71.9 2.3e-53 205.3
Cco05g2100 . 1 246 MADS-box Gene Family AT3G54340 56.1 2.1e-66 249.2
Cco03g0720 . 12 234 MADS-box Gene Family AT3G58780 65.5 2.1e-75 279.3
Cco04g2193 . 44 266 MADS-box Gene Family AT3G58780 63.1 4.4e-73 271.6
Cco08g0096 . 1 222 MADS-box Gene Family AT3G58780 60.9 4.9e-72 268.1
Cco02g1961 . 60 267 MADS-box Gene Family AT3G58780 63.2 9.8e-65 243.8
Cco07g1680 . 1 246 MADS-box Gene Family AT5G15800 73.4 8.2e-99 357.1
Cco06g0210 . 1 241 MADS-box Gene Family AT5G15800 59.8 1.2e-73 273.5
Cco01g1750 . 1 253 MADS-box Gene Family AT5G15800 53.8 5.0e-64 241.5
Cco08g1206 . 1 173 MADS-box Gene Family AT5G15800 69.5 1.8e-58 223.0
Cco01g1749 . 1 174 MADS-box Gene Family AT5G15800 53.4 2.4e-42 169.5
Cco07g1681 . 1 175 MADS-box Gene Family AT5G15800 54.3 9.2e-42 167.5
Cco08g1207 . 1 176 MADS-box Gene Family AT5G15800 54.5 1.2e-41 167.2
Cco05g0921 . 1 171 MADS-box Gene Family AT5G15800 54.0 6.6e-40 161.4
Cco07g1680 . 1 171 MADS-box Gene Family AT2G03710 66.9 1.1e-57 219.9
Cco08g1206 . 1 171 MADS-box Gene Family AT2G03710 65.1 7.2e-57 217.2
Cco06g0210 . 1 176 MADS-box Gene Family AT2G03710 63.8 2.6e-54 208.8
Cco01g1750 . 1 172 MADS-box Gene Family AT2G03710 63.6 3.7e-53 204.9
Cco06g0023 . 1 169 MADS-box Gene Family AT2G03710 54.7 6.0e-43 171.0
Cco07g1681 . 1 173 MADS-box Gene Family AT2G03710 51.7 4.0e-39 158.3
Cco07g1680 . 1 170 MADS-box Gene Family AT3G02310 86.5 6.7e-77 283.9
Cco06g0210 . 1 172 MADS-box Gene Family AT3G02310 77.9 1.3e-67 253.1
Cco01g1750 . 1 171 MADS-box Gene Family AT3G02310 67.3 6.3e-59 224.2
Cco08g1206 . 1 170 MADS-box Gene Family AT3G02310 66.7 1.9e-55 212.6
Cco06g0023 . 1 168 MADS-box Gene Family AT3G02310 61.4 2.3e-48 189.1
Cco08g1207 . 1 181 MADS-box Gene Family AT3G02310 53.6 7.8e-41 164.1
Cco07g1681 . 1 187 MADS-box Gene Family AT3G02310 51.3 1.0e-40 163.7
Cco05g0921 . 1 187 MADS-box Gene Family AT3G02310 51.0 4.3e-39 158.3
Cco03g0720 . 15 200 MADS-box Gene Family AT2G42830 72.9 5.8e-70 261.2
Cco08g0096 . 1 179 MADS-box Gene Family AT2G42830 72.9 1.3e-69 260.0
Cco04g2193 . 44 266 MADS-box Gene Family AT2G42830 61.9 1.6e-67 253.1
Cco02g1961 . 60 267 MADS-box Gene Family AT2G42830 62.0 4.6e-59 224.9
Cco06g0023 . 1 245 MADS-box Gene Family AT2G45650 64.7 1.4e-82 303.1
Cco07g1680 . 1 246 MADS-box Gene Family AT2G45650 50.4 2.0e-54 209.5
Cco05g0921 . 1 172 MADS-box Gene Family AT2G45650 58.6 2.2e-48 189.5
Cco08g1206 . 1 195 MADS-box Gene Family AT2G45650 51.2 2.9e-45 179.1
Cco07g1681 . 1 169 MADS-box Gene Family AT2G45650 53.3 4.9e-40 161.8
Cco08g0096 . 1 164 MADS-box Gene Family AT2G45650 53.0 4.9e-40 161.8
Cco08g1207 . 1 177 MADS-box Gene Family AT2G45650 52.0 2.7e-38 156.0
Cco01g1749 . 63 188 MADS-box Gene Family AT1G69120 67.7 1.7e-40 162.9
Cco08g1207 . 63 179 MADS-box Gene Family AT1G69120 70.1 2.3e-37 152.5
Cco01g1749 . 63 241 MADS-box Gene Family AT5G60910 56.1 1.5e-43 172.9
Cco06g0210 . 1 242 MADS-box Gene Family AT1G24260 72.9 7.7e-88 320.5
Cco07g1680 . 1 245 MADS-box Gene Family AT1G24260 59.8 5.5e-70 261.2
Cco01g1750 . 1 252 MADS-box Gene Family AT1G24260 50.6 2.3e-55 212.6
Cco08g1206 . 1 156 MADS-box Gene Family AT1G24260 66.9 4.9e-50 194.9
Cco01g1749 . 1 157 MADS-box Gene Family AT1G24260 54.3 7.8e-40 161.0
Cco08g1207 . 1 159 MADS-box Gene Family AT1G24260 53.8 7.8e-40 161.0
Cco05g0921 . 1 171 MADS-box Gene Family AT1G24260 51.1 2.8e-37 152.5
Cco01g1749 . 1 245 MADS-box Gene Family AT1G26310 56.1 1.9e-68 256.1
Cco08g1207 . 1 178 MADS-box Gene Family AT1G26310 71.3 8.9e-66 247.3
Cco07g1681 . 1 235 MADS-box Gene Family AT1G26310 55.5 7.0e-63 237.7
Cco08g1206 . 1 180 MADS-box Gene Family AT1G26310 54.6 1.1e-44 177.2
Cco07g1680 . 1 173 MADS-box Gene Family AT1G26310 54.5 4.0e-42 168.7
Cco06g0023 . 1 158 MADS-box Gene Family AT1G26310 59.2 5.3e-42 168.3
Cco01g1750 . 1 174 MADS-box Gene Family AT1G26310 54.2 7.6e-41 164.5
Cco08g0096 . 1 223 MADS-box Gene Family AT4G09960 75.2 8.9e-89 323.6
Cco03g0720 . 20 197 MADS-box Gene Family AT4G09960 74.7 9.5e-67 250.4
Cco04g2193 . 46 221 MADS-box Gene Family AT4G09960 74.4 9.5e-67 250.4
Cco02g1961 . 60 216 MADS-box Gene Family AT4G09960 66.2 4.3e-51 198.4
Cco08g0104 . 1 201 MADS-box Gene Family AT1G71692 57.6 2.5e-58 222.2
Cco06g0023 . 1 241 MADS-box Gene Family AT3G61120 56.1 6.7e-63 237.7
Cco07g1680 . 1 173 MADS-box Gene Family AT3G61120 53.8 1.1e-41 167.2
Cco06g0210 . 1 170 MADS-box Gene Family AT3G61120 55.8 1.9e-41 166.4
Cco01g1749 . 1 168 MADS-box Gene Family AT3G61120 51.5 3.7e-37 152.1
Cco08g1206 . 1 173 MADS-box Gene Family AT3G61120 50.9 3.7e-37 152.1
Cco01g0335 . 1 208 MADS-box Gene Family AT4G11880 59.2 3.8e-57 218.4
Cco05g0237 . 9 222 MADS-box Gene Family AT4G11880 53.4 1.3e-49 193.4
Cco06g0024 . 1 218 MADS-box Gene Family AT4G11880 53.4 1.1e-48 190.3
Cco05g0928 . 1 189 MADS-box Gene Family AT4G11880 56.5 2.7e-42 169.1
Cco01g0562 . 1 210 MADS-box Gene Family AT4G11880 51.8 7.8e-42 167.5
Cco10g1206 . 1 249 MADS-box Gene Family AT5G13790 54.4 1.0e-56 217.2
Cco10g0961 . 29 255 MADS-box Gene Family AT2G22630 52.0 2.2e-55 212.6
Cco04g1582 . 1 160 MADS-box Gene Family AT2G22630 67.5 1.2e-53 206.8
Cco01g0335 . 1 210 MADS-box Gene Family AT4G22950 60.6 2.8e-60 228.8
Cco05g0237 . 9 224 MADS-box Gene Family AT4G22950 53.3 3.7e-52 201.8
Cco06g0024 . 1 218 MADS-box Gene Family AT4G22950 54.3 3.7e-52 201.8
Cco05g0928 . 1 189 MADS-box Gene Family AT4G22950 55.8 1.1e-43 173.7
Cco01g0562 . 1 210 MADS-box Gene Family AT4G22950 51.6 2.6e-42 169.1
Cco08g0096 . 1 164 MADS-box Gene Family AT4G22950 51.8 2.6e-37 152.5
Cco06g0024 . 1 162 MADS-box Gene Family AT2G45660 71.0 8.3e-54 206.8
Cco05g0237 . 9 168 MADS-box Gene Family AT2G45660 68.1 1.7e-51 199.1
Cco01g0335 . 1 158 MADS-box Gene Family AT2G45660 65.8 9.5e-50 193.4
Cco01g0562 . 1 158 MADS-box Gene Family AT2G45660 65.8 2.4e-45 178.7
Cco05g0928 . 1 157 MADS-box Gene Family AT2G45660 60.5 5.0e-43 171.0
Cco10g0961 . 29 256 MADS-box Gene Family AT4G37940 51.8 2.7e-55 212.2
Cco04g1582 . 1 155 MADS-box Gene Family AT4G37940 67.1 2.1e-52 202.6
Cco04g1600 . 116 338 MADS-box Gene Family AT2G22540 63.7 2.1e-69 259.2
Cco08g1324 . 1 225 MADS-box Gene Family AT2G22540 56.5 3.8e-58 221.9
Cco10g0939 . 25 179 MADS-box Gene Family AT2G22540 59.0 3.4e-43 172.2
Cco04g1600 . 116 342 MADS-box Gene Family AT4G24540 57.5 4.8e-60 228.0
Cco08g1324 . 1 225 MADS-box Gene Family AT4G24540 56.8 2.2e-57 219.2
Cco10g0939 . 25 199 MADS-box Gene Family AT4G24540 53.4 6.3e-44 174.5
Cco01g0562 . 1 145 MADS-box Gene Family AT5G62165 68.3 3.9e-48 188.0
Cco05g0928 . 1 146 MADS-box Gene Family AT5G62165 64.4 4.7e-46 181.0
Cco06g0024 . 1 154 MADS-box Gene Family AT5G62165 55.2 1.6e-41 166.0
Cco05g0237 . 9 152 MADS-box Gene Family AT5G62165 62.5 2.0e-41 165.6
Cco01g0335 . 1 153 MADS-box Gene Family AT5G62165 55.6 6.0e-41 164.1
Cco10g0961 . 29 263 MADS-box Gene Family AT2G14210 53.8 1.7e-55 213.0
Cco04g1582 . 1 142 MADS-box Gene Family AT2G14210 66.4 9.4e-46 180.6
Cco04g2225 . 84 200 MADS-box Gene Family AT1G29960 54.7 1.7e-38 155.6
Cco05g0928 . 1 145 MADS-box Gene Family AT5G51870 57.2 4.4e-41 164.9
Cco01g0562 . 1 144 MADS-box Gene Family AT5G51870 56.6 3.5e-38 155.2
Cco01g1749 . 1 239 MADS-box Gene Family AT3G30260 52.0 3.4e-54 208.8
Cco07g1681 . 1 239 MADS-box Gene Family AT3G30260 51.8 3.0e-50 195.7
Cco08g1207 . 1 178 MADS-box Gene Family AT3G30260 58.4 2.0e-46 183.0
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001964 1 5 2 1 2 2 2 2 2 2 2 2 2 2 2 2 2 4 2 2 2 2 2 2 2 2 1 3 5 1 65
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
59804 PF02902 Peptidase_C48 1.00E-39 CL0125 Cco TF