Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cco08g1338 ATGGCCGCCGCCGTGCCGGAAAATCTCTCTCGCGAGCAATATGTGTATCTAGCGAAGCTTGCCGAGCAGGCTGAAAGATATGAGGAGATGGTTCAGTTCATGCAGAAACTTGTTCTTGGTTCAACCCCAGGCTCTGAGCTCTCTGTCGAGGAGCGAAATCTTCTCTCTGTCGCTTACAAGAACGTGATTGGCTCACTTCGAGCCGCTTGGCGGATTGTCTCTTCCATCGAGCAAAAGGAGGAGAGCCGTAAGAATGAAGAGCATGTTGTTCTTGTTAAGGATTACAGATCAAAGGTTGAGGCTGAGCTTTCCGACGTCTGTGCGAGTATTTTGCAGCTTTTGGACTCGAATCTTATTCCCTCCGCCTCTGCTAGTGAGTCTAAGGTCTTCTACTTGAAGATGAAAGGGGATTACCATAGGTATTTGGCGGAGTTTAAGGTTGGGGATGAGAGGAAAGCCGCTGCTGAGGATACTATGCTGGCTTATAGAGCTGCTCAGGATGTCGCAGTTGCAGATCTTGCACCCACTCATCCGATAAGGCTAGGGCTGGCACTCAATTTCTCTGTGTTTTACTTCGAGATTCTGAATCAGTCCGATAAAGCATGTAGCATGGCCAAGGAGGCATTTGAGGAAGCCATTGCTGAACTGGACACTTTGGGTGAAGAATCATACAAGGACAGTACCCTCATCATGCAACTATTGAGGGACAACCTCACTCTCTGGACTTCAGATGCTCAGGACCAGTTAGATGAGTCATAG 759 48.48 MAAAVPENLSREQYVYLAKLAEQAERYEEMVQFMQKLVLGSTPGSELSVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEESRKNEEHVVLVKDYRSKVEAELSDVCASILQLLDSNLIPSASASESKVFYLKMKGDYHRYLAEFKVGDERKAAAEDTMLAYRAAQDVAVADLAPTHPIRLGLALNFSVFYFEILNQSDKACSMAKEAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDAQDQLDES 252
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 25263855 25267215 + CcPI632755_08g013380.1 Cco08g1338 185812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cco08g1338 252 SUPERFAMILY 14-3-3 protein 10 244 IPR036815 -
Cco08g1338 252 Gene3D - 1 252 IPR036815 -
Cco08g1338 252 SMART 1433_4 11 251 IPR023410 -
Cco08g1338 252 PRINTS 14-3-3 protein zeta signature 126 148 IPR000308 -
Cco08g1338 252 PRINTS 14-3-3 protein zeta signature 161 187 IPR000308 -
Cco08g1338 252 PRINTS 14-3-3 protein zeta signature 95 119 IPR000308 -
Cco08g1338 252 PRINTS 14-3-3 protein zeta signature 46 75 IPR000308 -
Cco08g1338 252 PRINTS 14-3-3 protein zeta signature 188 214 IPR000308 -
Cco08g1338 252 PRINTS 14-3-3 protein zeta signature 215 244 IPR000308 -
Cco08g1338 252 PIRSF 14-3-3 6 252 IPR000308 -
Cco08g1338 252 FunFam 14-3-3 protein epsilon 8 252 - -
Cco08g1338 252 ProSitePatterns 14-3-3 proteins signature 2. 224 243 IPR023409 -
Cco08g1338 252 Coils Coil 17 37 - -
Cco08g1338 252 PANTHER 14-3-3 PROTEIN 11 247 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Cco08g1338 252 Pfam 14-3-3 protein 17 242 IPR023410 -
Cco08g1338 252 ProSitePatterns 14-3-3 proteins signature 1. 52 62 IPR023409 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cco08g1338 Cco-Chr8:25263855 Cco11g1473 Cco-Chr11:27549261 1.40E-100 dispersed
Cco11g1495 Cco-Chr11:27783990 Cco08g1338 Cco-Chr8:25263855 6.40E-125 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cco08g1338 K06630 - csv:101222827 483.411